Publications
Dieterich, C.; Cusack, B.; Wang, H.; Rateitschak, K.; Krause, A. & Vingron, M. (2002), 'Annotating regulatory DNA based on man-mouse genomic comparison.', Bioinformatics 18 Suppl 2, S84--S90.
Dieterich, C. et al. (2002), 'Annotating regulatory DNA based on man-mouse genomic comparison.', Bioinformatics 18 Suppl 2, S84—S90.
Dieterich, C.; Schandar, M.; Noll, M.; Johannes, F.-J.; Brunner, H.; Graeve, T. & Rupp, S. (2002), 'In vitro reconstructed human epithelia reveal contributions of Candida albicans EFG1 and CPH1 to adhesion and invasion.', Microbiology 148(Pt 2), 497--506.
Dieterich, C.; Herwig, R. & Vingron, M. (2003), 'Exploring potential target genes of signaling pathways by predicting conserved transcription factor binding sites.', Bioinformatics 19 Suppl 2, ii50--ii56.
Dieterich, C.; Wang, H.; Rateitschak, K.; Luz, H. & Vingron, M. (2003), 'CORG: a database for COmparative Regulatory Genomics.', Nucleic Acids Res 31(1), 55--57.
Philippar, U.; Schratt, G.; Dieterich, C.; Müller, J. M.; Galgóczy, P.; Engel, F. B.; Keating, M. T.; Gertler, F.; Schüle, R.; Vingron, M. & Nordheim, A. (2004), 'The SRF target gene Fhl2 antagonizes RhoA/MAL-dependent activation of SRF.', Mol Cell 16(6), 867--880.
Dieterich, C.; Rahmann, S. & Vingron, M. (2004), 'Functional inference from non-random distributions of conserved predicted transcription factor binding sites.', Bioinformatics 20 Suppl 1, i109--i115.
Corà, D.; Herrmann, C.; Dieterich, C.; Cunto, F. D.; Provero, P. & Caselle, M. (2005), 'Ab initio identification of putative human transcription factor binding sites by comparative genomics.', BMC Bioinformatics 6, 110.
Dieterich, C.; Grossmann, S.; Tanzer, A.; Röpcke, S.; Arndt, P. F.; Stadler, P. F. & Vingron, M. (2005), 'Comparative promoter region analysis powered by CORG.', BMC Genomics 6(1), 24.
Michael, M.; Dieterich, C. & Vingron, M. (2005), 'SITEBLAST--rapid and sensitive local alignment of genomic sequences employing motif anchors.', Bioinformatics 21(9), 2093--2094.
Dieterich, C. & Vingron, M. (2006), 'Comparative promoter analysis in vertebrate genomes with the CORG workbench.', Methods Mol Biol 338, 105--118.
Dieterich, C.; Roeseler, W. & Srinivasan, J. (2006), 'Pristionchus pacificus genomics: from genetics to genome sequence.', WormBook, 1--14.
Hecht, J.; Seitz, V.; Urban, M.; Wagner, F.; Robinson, P. N.; Stiege, A.; Dieterich, C.; Kornak, U.; Wilkening, U.; Brieske, N.; Zwingman, C.; Kidess, A.; Stricker, S. & Mundlos, S. (2007), 'Detection of novel skeletogenesis target genes by comprehensive analysis of a Runx2(-/-) mouse model.', Gene Expr Patterns 7(1-2), 102--112.
Dieterich, C.; Roeseler, W.; Sobetzko, P. & Sommer, R. J. (2007), 'Pristionchus.org: a genome-centric database of the nematode satellite species Pristionchus pacificus.', Nucleic Acids Res 35(Database issue), D498--D502.
Dieterich, C.; Franz, M. W. & Vingron, M. (2007), 'Developments in CORG: a gene-centric comparative genomics resource.', Nucleic Acids Res 35(Database issue), D32--D35.
Dieterich, C. & Sommer, R. J. (2008), 'A Caenorhabditis motif compendium for studying transcriptional gene regulation.', BMC Genomics 9, 30.
Hecht, J.; Stricker, S.; Wiecha, U.; Stiege, A.; Panopoulou, G.; Podsiadlowski, L.; Poustka, A. J.; Dieterich, C.; Ehrich, S.; Suvorova, J.; Mundlos, S. & Seitz, V. (2008), 'Evolution of a core gene network for skeletogenesis in chordates.', PLoS Genet 4(3), e1000025.
Rae, R.; Riebesell, M.; Dinkelacker, I.; Wang, Q.; Herrmann, M.; Weller, A. M.; Dieterich, C. & Sommer, R. J. (2008), 'Isolation of naturally associated bacteria of necromenic Pristionchus nematodes and fitness consequences.', J Exp Biol 211(Pt 12), 1927--1936.
Dieterich, C. & Sommer, R. J. (2008), 'A Caenorhabditis motif compendium for studying transcriptional gene regulation.', BMC Genomics 9, 30.
Dieterich, C.; Clifton, S. W.; Schuster, L. N.; Chinwalla, A.; Delehaunty, K.; Dinkelacker, I.; Fulton, L.; Fulton, R.; Godfrey, J.; Minx, P.; Mitreva, M.; Roeseler, W.; Tian, H.; Witte, H.; Yang, S.-P.; Wilson, R. K. & Sommer, R. J. (2008), 'The Pristionchus pacificus genome provides a unique perspective on nematode lifestyle and parasitism.', Nat Genet 40(10), 1193--1198.
Rödelsperger, C. & Dieterich, C. (2008), 'Syntenator: Multiple gene order alignments with a gene-specific scoring function.', Algorithms Mol Biol 3, 14.
Dieterich, C. & Sommer, R. J. (2009), 'How to become a parasite - lessons from the genomes of nematodes.', Trends Genet 25(5), 203--209.
Fröhler, S. & Dieterich, C. (2009), '3PD: Rapid design of optimal primers for chromosome conformation capture assays.', BMC Genomics 10(1), 635.
Rödelsperger, C. & Dieterich, C. (2010), 'CYNTENATOR: Progressive gene order alignment of 17 vertebrate genomes.', PLOS ONE accepted