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11. Januar 2021 in EMBO J

Ythdf is a N6-methyladenosine reader that modulates Fmr1 target mRNA selection and restricts axonal growth in Drosophila

L. Worpenberg
C. Paolantoni
S. Longhi
M.M. Mulorz
T. Lence
H.H. Wessels
E. Dassi
G. Aiello
F.X.R. Sutandy
M. Scheibe
R.R. Edupuganti
A. Busch
M.M. Möckel
M. Vermeulen
F. Butter
J. König
M. Notarangelo
U. Ohler
C. Dieterich
A. Quattrone
A. Soldano
J.Y. Roignant

22. Dezember 2020 in Mol Cell

Protein synthesis in the developing neocortex at near-atomic resolution reveals Ebp1-mediated neuronal proteostasis at the 60S tunnel exit

M.L. Kraushar
F. Krupp
D. Harnett
P. Turko
M.C. Ambrozkiewicz
T. Sprink
K. Imami
M. Günnigmann
U. Zinnall
C.H. Vieira-Vieira
T. Schaub
A. Münster-Wandowski
J. Bürger
E. Borisova
H. Yamamoto
M.R. Rasin
U. Ohler
D. Beule
T. Mielke
V. Tarabykin
M. Landthaler
G. Kramer
I. Vida
M. Selbach
C.M.T. Spahn

07. Dezember 2020 in Dev Cell

Lineage-resolved enhancer and promoter usage during a time course of embryogenesis

J.P. Reddington
D.A. Garfield
O.M. Sigalova
A. Karabacak Calviello
R. Marco-Ferreres
C. Girardot
R.R. Viales
J.F. Degner
U. Ohler
E.E.M. Furlong

01. Dezember 2020 in Stat Methods Med Res

Using gradient boosting with stability selection on health insurance claims data to identify disease trajectories in chronic obstructive pulmonary disease

T. Ploner
S. Heß
M. Grum
P. Drewe-Boss
J. Walker

06. August 2020 in Int J Mol Sci

The chloroplast RNA binding protein CP31A has a preference for mRNAs encoding the subunits of the chloroplast NAD(P)H dehydrogenase complex and is required for their accumulation

B. Lenzen
T. Rühle
M.K. Lehniger
A. Okuzaki
M. Labs
J.M. Muino
U. Ohler
D. Leister
C. Schmitz-Linneweber

01. August 2020 in Nat Struct Mol Biol

Quantification of translation uncovers the functions of the alternative transcriptome

L. Calviello
A. Hirsekorn
U. Ohler

13. Juli 2020 in Nat Commun

Deep learning for genomics using Janggu

W. Kopp
R. Monti
A. Tamburrini
U. Ohler
A. Akalin

01. April 2020 in Biochim Biophys Acta Gene Regul Mech

Towards a deeper annotation of human lncRNAs

M.W. Szcześniak
E. Wanowska
N. Mukherjee
U. Ohler
I. Makałowska

10. März 2020 in Nat Commun

Integrated proteogenomic deep sequencing and analytics accurately identify non-canonical peptides in tumor immunopeptidomes

C. Chong
M. Müller
H.S. Pak
D. Harnett
F. Huber
D. Grun
M. Leleu
A. Auger
M. Arnaud
B.J. Stevenson
J. Michaux
I. Bilic
A. Hirsekorn
L. Calviello
L. Simó-Riudalbas
E. Planet
J. Lubiński
M. Bryśkiewicz
M. Wiznerowicz
I. Xenarios
L. Zhang
D. Trono
A. Harari
U. Ohler
G. Coukos
M. Bassani-Sternberg

01. Februar 2020 in Genome Res

Deep neural networks for interpreting RNA-binding protein target preferences

M. Ghanbari
U. Ohler