Woman reading in MDC library

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in Genome Biol

Widespread activation of antisense transcription of the host genome during herpes simplex virus 1 infection

  • E. Wyler
  • J. Menegatti
  • V. Franke
  • C. Kocks
  • A. Boltengagen
  • T. Hennig
  • K. Theil
  • A. Rutkowski
  • C. Ferrai
  • L. Baer
  • L. Kermas
  • C. Friedel
  • N. Rajewsky
  • A. Akalin
  • L. Dölken
  • F. Grässer
  • M. Landthaler
in Nat Commun

RNA localization is a key determinant of neurite-enriched proteome

  • A. Zappulo
  • D. van den Bruck
  • C. Ciolli Mattioli
  • V. Franke
  • K. Imami
  • E. McShane
  • M. Moreno-Estelles
  • L. Calviello
  • A. Filipchyk
  • E. Peguero-Sanchez
  • T. Müller
  • A. Woehler
  • C. Birchmeier
  • E. Merino
  • N. Rajewsky
  • U. Ohler
  • E.O. Mazzoni
  • M. Selbach
  • A. Akalin
  • M. Chekulaeva
in BMC Res Notes

Rattus norvegicus BN/SHR liver and heart left ventricle ribosomal RNA depleted directional RNA sequencing

  • E. Wyler
  • S. van Heesch
  • E. Adami
  • N. Hubner
  • M. Landthaler
in Mol Syst Biol

An immediate-late gene expression module decodes ERK signal duration

  • F. Uhlitz
  • A. Sieber
  • E. Wyler
  • R. Fritsche-Guenther
  • J. Meisig
  • M. Landthaler
  • B. Klinger
  • N. Blüthgen
in Mol Cell

Translation of circRNAs

  • N.R. Pamudurti
  • O. Bartok
  • M. Jens
  • R. Ashwal-Fluss
  • C. Stottmeister
  • L. Ruhe
  • M. Hanan
  • E. Wyler
  • D. Perez-Hernandez
  • E. Ramberger
  • S. Shenzis
  • M. Samson
  • G. Dittmar
  • M. Landthaler
  • M. Chekulaeva
  • N. Rajewsky
  • S. Kadener
in J Immunol Res

RNA-seq based transcriptome analysis of the type I interferon host response upon vaccinia virus infection of mouse cells

  • B. Hernáez
  • G. Alonso
  • J.M. Alonso-Lobo
  • A. Rastrojo
  • C. Fischer
  • S. Sauer
  • B. Aguado
  • A. Alcamí
in BMC Bioinformatics

JACUSA: site-specific identification of RNA editing events from replicate sequencing data

  • M. Piechotta
  • E. Wyler
  • U. Ohler
  • M. Landthaler
  • C. Dieterich
in J Proteome Res

Efficient application of de novo RNA assemblers for proteomics informed by transcriptomics

  • T. Luge
  • C. Fischer
  • S. Sauer
in Mol Cell

Eyes on translation

  • M. Chekulaeva
  • M. Landthaler
in Nat Methods

Detecting actively translated open reading frames in ribosome profiling data

  • L. Calviello
  • N. Mukherjee
  • E. Wyler
  • H. Zauber
  • A. Hirsekorn
  • M. Selbach
  • M. Landthaler
  • B. Obermayer
  • U. Ohler