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in Nat Commun

Determinants of promoter and enhancer transcription directionality in metazoans

  • M.M. Ibrahim
  • A. Karabacak
  • A. Glahs
  • E. Kolundzic
  • A. Hirsekorn
  • A. Carda
  • B. Tursun
  • R.P. Zinzen
  • S.A. Lacadie
  • U. Ohler
in Mol Cell

Phosphorylation of the ribosomal protein RPL12/uL11 affects translation during mitosis

  • K. Imami
  • M. Milek
  • B. Bogdanow
  • T. Yasuda
  • N. Kastelic
  • H. Zauber
  • Y. Ishihama
  • M. Landthaler
  • M. Selbach
in Dev Cell

FACT sets a barrier for cell fate reprogramming in Caenorhabditis elegans and human cells

  • E. Kolundzic
  • A. Ofenbauer
  • S.I. Bulut
  • B. Uyar
  • G. Baytek
  • A. Sommermeier
  • S. Seelk
  • M. He
  • A. Hirsekorn
  • D. Vucicevic
  • A. Akalin
  • S. Diecke
  • S.A. Lacadie
  • B. Tursun
in Genome Biol

McEnhancer: predicting gene expression via semi-supervised assignment of enhancers to target genes

  • D. Hafez
  • A. Karabacak
  • S. Krueger
  • Y.C. Hwang
  • L.S. Wang
  • R.P. Zinzen
  • U. Ohler
in Nucleic Acids Res

RCAS: an RNA centric annotation system for transcriptome-wide regions of interest

  • B. Uyar
  • D. Yusuf
  • R. Wurmus
  • N. Rajewsky
  • U. Ohler
  • A. Akalin