Scientific Publications Search Search Author Release Date Research Group Search Sort by RelevanceFrom A-ZAuthored onDate/Time RangeRelease date Order AscDesc Birchmeier-Kohler, Carmen Prof. Dr. (1) Chekulaeva, Marina Dr. (1) Franke, Vedran Dr. (2) Kocks, Christine Dr. (1) Landthaler, Markus Prof. Dr. (1) Ohler, Uwe Prof. Dr. (3) Pombo, Ana Prof. Dr. (1) Rajewsky, Nikolaus Prof. Dr. (3) Selbach, Matthias Prof. Dr. (1) Uyar, Bora Dr. (2) Woehler, Andrew Dr. (1) Wurmus, Ricardo (1) Wyler, Emanuel Dr. (1) (-) Akalin, Altuna Dr. (6) (-) Blume, Alexander Dr. (1) (-) Kukalev, Alexander Dr. (1) (-) Müller, Thomas Dr. (1) 2006 (2) 2007 (1) 2008 (1) 2009 (3) 2010 (3) 2011 (1) 2012 (4) 2013 (3) 2014 (3) 2015 (4) (-) 2017 (6) 2019 (9) 2020 (7) 2021 (8) 2024 (1) (-) Bioinformatics and Omics Data Science (6) Computational Regulatory Genomics (3) Developmental Biology / Signal Transduction (3) Epigenetic Regulation and Chromatin Architecture (2) Non-coding RNAs and Mechanisms of Cytoplasmic Gene Regulation (1) Proteome Dynamics (1) RNA Biology and Posttranscriptional Regulation (1) Systems Biology Imaging (1) Systems Biology of Gene Regulatory Elements (3) 6 Results: Active Filter: Akalin, Altuna Dr.Blume, Alexander Dr.Kukalev, Alexander Dr.Müller, Thomas Dr.Bioinformatics and Omics Data Science2017 Sort: Result score Newest to oldest Oldest to newest November 10, 2017 / J Biotechnol Strategies for analyzing bisulfite sequencing data K. Wreczycka A. Gosdschan D. Yusuf B. Grüning Y. Assenov A. Akalin September 19, 2017 / Nat Commun RNA localization is a key determinant of neurite-enriched proteome A. Zappulo D. van den Bruck C. Ciolli Mattioli V. Franke K. Imami E. McShane M. Moreno-Estelles L. Calviello A. Filipchyk E. Peguero-Sanchez T. Müller A. Woehler C. Birchmeier E. Merino N. Rajewsky U. Ohler E.O. Mazzoni M. Selbach A. Akalin M. Chekulaeva October 16, 2017 / Mol Syst Biol RNA polymerase II primes Polycomb-repressed developmental genes throughout terminal neuronal differentiation C. Ferrai E. Torlai Triglia J.R. Risner-Janiczek T. Rito O.J.L. Rackham I. De Santiago A. Kukalev M. Nicodemi A. Akalin M. Li M.A. Ungless A. Pombo October 31, 2017 / Genome Biol Widespread activation of antisense transcription of the host genome during herpes simplex virus 1 infection E. Wyler J. Menegatti V. Franke C. Kocks A. Boltengagen T. Hennig K. Theil A. Rutkowski C. Ferrai L. Baer L. Kermas C. Friedel N. Rajewsky A. Akalin L. Dölken F. Grässer M. Landthaler June 02, 2017 / Nucleic Acids Res RCAS: an RNA centric annotation system for transcriptome-wide regions of interest B. Uyar D. Yusuf R. Wurmus N. Rajewsky U. Ohler A. Akalin July 03, 2017 / Nucleic Acids Res The RNA workbench: best practices for RNA and high-throughput sequencing bioinformatics in Galaxy B.A. Grüning J. Fallmann D. Yusuf S. Will A. Erxleben F. Eggenhofer T. Houwaart B. Batut P. Videm A. Bagnacani M. Wolfien S.C. Lott Y. Hoogstrate W.R. Hess O. Wolkenhauer S. Hoffmann A. Akalin U. Ohler P.F. Stadler R. Backofen
November 10, 2017 / J Biotechnol Strategies for analyzing bisulfite sequencing data K. Wreczycka A. Gosdschan D. Yusuf B. Grüning Y. Assenov A. Akalin
September 19, 2017 / Nat Commun RNA localization is a key determinant of neurite-enriched proteome A. Zappulo D. van den Bruck C. Ciolli Mattioli V. Franke K. Imami E. McShane M. Moreno-Estelles L. Calviello A. Filipchyk E. Peguero-Sanchez T. Müller A. Woehler C. Birchmeier E. Merino N. Rajewsky U. Ohler E.O. Mazzoni M. Selbach A. Akalin M. Chekulaeva
October 16, 2017 / Mol Syst Biol RNA polymerase II primes Polycomb-repressed developmental genes throughout terminal neuronal differentiation C. Ferrai E. Torlai Triglia J.R. Risner-Janiczek T. Rito O.J.L. Rackham I. De Santiago A. Kukalev M. Nicodemi A. Akalin M. Li M.A. Ungless A. Pombo
October 31, 2017 / Genome Biol Widespread activation of antisense transcription of the host genome during herpes simplex virus 1 infection E. Wyler J. Menegatti V. Franke C. Kocks A. Boltengagen T. Hennig K. Theil A. Rutkowski C. Ferrai L. Baer L. Kermas C. Friedel N. Rajewsky A. Akalin L. Dölken F. Grässer M. Landthaler
June 02, 2017 / Nucleic Acids Res RCAS: an RNA centric annotation system for transcriptome-wide regions of interest B. Uyar D. Yusuf R. Wurmus N. Rajewsky U. Ohler A. Akalin
July 03, 2017 / Nucleic Acids Res The RNA workbench: best practices for RNA and high-throughput sequencing bioinformatics in Galaxy B.A. Grüning J. Fallmann D. Yusuf S. Will A. Erxleben F. Eggenhofer T. Houwaart B. Batut P. Videm A. Bagnacani M. Wolfien S.C. Lott Y. Hoogstrate W.R. Hess O. Wolkenhauer S. Hoffmann A. Akalin U. Ohler P.F. Stadler R. Backofen