Scientific Publications Search Search Author Impact Factor Release Date Research Group Search Sort by RelevanceFrom A-ZAuthored onDate/Time RangeRelease date Order AscDesc Adami, Eleonora Dr. (3) Altmueller, Janine Dr.med. (3) Bader, Michael Prof. Dr. (2) Bähring, Sylvia Dr. (2) Barke, Niclas (1) Bartolomaeus, Theda (1) Begay-Müller, Valerie Dr. (1) Beule, Dieter Dr. (8) Birchmeier, Walter Prof. Dr. (2) Birchmeier-Kohler, Carmen Prof. Dr. (8) Blachut, Susanne (1) Blume, Alexander Dr. (1) Blüthgen, Nils (7) Borodina, Tatiana Dr. (3) Bunse, Mario Dr. (1) Burkert, Christian Martin (1) Chekulaeva, Marina Dr. (5) Chen, Chia-Yu (1) Chen, Wei Prof. Dr. (8) Chu, Van Trung Dr. (1) Dahlmann, Mathias Dr. (1) Daumke, Oliver Prof. Dr. (7) Del Giudice, Simone (2) Deter, Aylina (1) Diecke, Sebastian Dr. (4) Di Virgilio, Michela Prof. Dr. (2) Fälber, Katja Dr. (1) Falcke, Martin Prof. Dr. (1) Faxel, Miriam (1) Forslund, Sofia Dr. (1) Franke, Vedran Dr. (7) Freimuth, Jonas (1) Fritsche, Raphaela Dr. (1) Gerhardt, Holger Prof. Dr. (1) Ghanbari, Mahsa Dr. (5) Gil, Marine (1) Golusik, Sabrina (1) Gotthardt, Michael Prof. Dr. (5) Graf, Robin Dr. (2) Grobe, Jenny (1) Grossmann, Katja Dr. (1) Guo, Yong (1) Hammes-Lewin, Annette Dr. (1) Haucke, Volker Professor (2) Heinemann, Udo Prof. Dr. (4) Henssen, Anton Prof. Dr. med. (2) Herzog, Margareta (2) Heuser, Arnd Dr. (2) Hinz, Michael Dr. (1) Hinze, Christian Dr. med. Dipl.-Math. (1) Hirsekorn, Antje (12) Hübner, Norbert Prof. Dr. (8) Hummel, Oliver (1) Ivics, Zoltan Dr. (2) Izsvak, Zsuzsanna Dr. (3) Jarosch, Ernst Dr. (1) Junker, Jan Philipp Prof. Dr. (2) Kastelic, Nicolai (4) Kaufmann, Tom (1) Kempa, Stefan Dr. (10) Kirchner, Marieluise Dr. (13) Klußmann, Enno PD Dr. (2) Kocks, Christine Dr. (5) Kolesnichenko, Marina Dr. (1) Ku, Min-Chi Dr. (1) Kühn, Ralf Dr. (2) Kunz, Severine Dr. (1) Lacadie, Scott Allen Dr. (10) Lahmann, Ines Dr. (1) Landthaler, Markus Prof. Dr. (117) Langanki, Reika (1) Lewin, Gary Prof. Dr. (5) Lindberg, Eric Lars-Helge (1) Liu, Tiannan (1) Lohse, Martin Prof. Dr. (1) Luft, Friedrich Prof. Dr. (1) Maatz, Henrike Dr. (3) Marko, Lajos Dr. (1) Martin, Lisa Maria (1) Mastrobuoni, Guido Dr. (8) Mathas, Stephan Dr. (1) Merks, Anne Margarete Dr. (1) Mertins, Philipp Dr. (3) Meyer, Irmtraud Margret Prof. Dr. (1) Minia, Igor Dr. (5) Mintcheva, Janita (1) Monti, Remo (3) Müller, Dominik Prof. Dr. (1) Müller, Thomas Dr. (2) Müthel, Stefanie (1) Napieczynska, Hanna Dr. (1) Nazare, Marc (1) Neuschulz, Anika (1) Niendorf, Thoralf Prof. Dr. (1) Obermayer-Wasserscheid, Benedikt Dr. (11) Ofenbauer, Andreas Dr. (1) Ohler, Uwe Prof. Dr. (138) Oliveras Martinez, Anna Dr. (1) Panakova, Daniela Dr. (2) Patone, Giannino Dr. (2) Paul, Friedemann Prof. Dr. med. (1) Pombo, Ana Prof. Dr. (2) Popova, Elena Dr. (1) Poulet, James Prof. Dr. (1) Preibisch, Stephan Dr. (1) Prigione, Alessandro Prof. Dr. (1) Qadri, Fatimunnisa Dr. (1) Quedenau, Claudia (3) Radke, Michael Dr. (2) Rajewsky, Klaus Prof. Dr. (3) Rajewsky, Nikolaus Prof. Dr. (26) Rautenstrauch, Pia Josefine (2) Rehm, Armin Dr. (1) Rocks, Oliver Dr. (3) Röefzaad, Claudia (1) Roske, Yvette Dr. (2) Rother, Franziska Dr. (1) Rrustemi, Trendelina (2) Rudolph, Ina-Maria Dr. (1) Ruiz Orera, Jorge Dr. (1) Rybak-Wolf, Agnieszka Dr. (3) Sander, Maike Prof. Dr. (1) Scharek, Nadine (1) Scheidereit, Claus Prof. Dr. (2) Schmitt, Clemens Prof. Dr. (1) Schütz, Anja Dr. (3) Schwarz, Roland Dr. (3) Selbach, Matthias Prof. Dr. (126) Sholokh, Anastasiia (1) Simon, Katja Prof. Dr. (1) Singh, Manvendra Dr. (3) Sommer, Christian (4) Sommer, Thomas Prof. Dr. (1) Spanjaard, Bastiaan Dr. (1) Sporbert, Anje Dr. (2) Sprink, Thiemo Dr. (1) Spuler, Simone Prof. (1) Stein, Ulrike Prof. Dr. (1) Streck, Adam Dr. (1) Sunaga-Franze, Daniele Yumi Dr. (1) Taube, Martin (1) Teixeira Alves, Luiz Gustavo Dr. (7) Tursun, Baris Dr. (2) Uyar, Bora Dr. (5) van Bentum, Mirjam (1) Villamil, Gabriel (1) Vucicevic, Dubravka (3) Walther, Wolfgang Prof. Dr. (1) Waltho, Anita (1) Wanker, Erich Prof. Dr. (3) Wei, Tzu Ting (1) Willnow, Thomas Prof. Dr. (1) Woehler, Andrew Dr. (3) Wolf, Jana Prof. Dr. (3) Wurmus, Ricardo (5) Wyler, Emanuel Dr. (54) Zauber, Henrik Dr. (16) Zenkner, Martina (1) Ziehm, Matthias Dr. (3) Zinzen, Robert Patrick Dr. (3) Zühlke, Kerstin Dr. (2) (-) Akalin, Altuna Dr. (18) 2015 (1) 2017 (4) 2018 (2) 2019 (5) 2020 (1) 2021 (1) 2022 (3) 2024 (1) AG Müller/Dechend (ECRC) (10) Animal Phenotyping (3) Bioinformatics and Omics Data Science (73) Biology of Malignant Lymphomas (4) Cancer Genetics and Cellular Stress Responses (1) Cardiac MRI (37) (-) Computational Regulatory Genomics (9) Developmental Biology / Signal Transduction (4) Development and Function of Neural Circuits (1) Epigenetic Regulation and Chromatin Architecture (4) Experimental Ultrahigh-Field MR (28) Genetics and Genomics of Cardiovascular Diseases (6) Genetics of Congenital Heart Disease (1) Genome Diversification & Integrity (2) Genome Engineering & Disease Models (8) Genomics (1) Hypertension-caused End-Organ Damage (10) Hypertension-Mediated End-Organ Damage (10) Immune Mechanisms and Human Antibodies (2) Immune Regulation and Cancer (10) Integrative Vascular Biology (1) Magnetic Resonance (28) Microenvironmental Regulation in Autoimmunity and Cancer (2) Mobile DNA (1) Molecular Biology of Peptide Hormones (8) Molecular Cardiovascular Research (3) Myology (5) Nephrology and Inflammatory Vascular Diseases (1) Neuroimmunology Laboratory (1) Non-coding RNAs and Mechanisms of Cytoplasmic Gene Regulation (4) Pluripotent Stem Cells (2) (-) Proteome Dynamics (6) Proteomics (2) Proteomics and Metabolomics (1) Proteomics and Molecular Mechanisms of Neurodegenerative Diseases (2) Quantitative Developmental Biology (1) (-) RNA Biology and Posttranscriptional Regulation (5) Structural Biology of Membrane-Associated Processes (4) Systems Biology Imaging (2) Systems Biology of Gene Regulatory Elements (8) Transgenics (8) Translational Bioinformatics (1) Translational Tumorimmunology (2) 18 Results: Active Filter: Akalin, Altuna Dr.Computational Regulatory GenomicsProteome DynamicsRNA Biology and Posttranscriptional Regulation Sort: Result score Newest to oldest Oldest to newest March 19, 2021 / iScience Transcriptomic profiling of SARS-CoV-2 infected human cell lines identifies HSP90 as target for COVID-19 therapy E. Wyler K. Mösbauer V. Franke A. Diag L.T. Gottula R. Arsiè F. Klironomos D. Koppstein K. Hönzke S. Ayoub C. Buccitelli K. Hoffmann A. Richter I. Legnini A. Ivanov T. Mari S. Del Giudice J. Papies S. Praktiknjo T.F. Meyer M.A. Müller D. Niemeyer A. Hocke M. Selbach A. Akalin N. Rajewsky C. Drosten M. Landthaler February 01, 2022 / Nat Mach Intell Simultaneous dimensionality reduction and integration for single-cell ATAC-seq data using deep learning W. Kopp A. Akalin U. Ohler January 13, 2022 / Cell Genom Single-cell-resolved dynamics of chromatin architecture delineate cell and regulatory states in zebrafish embryos A.C. McGarvey W. Kopp D. Vučićević K. Mattonet R. Kempfer A. Hirsekorn I. Bilić M. Gil A. Trinks A.M. Merks D. Panáková A. Pombo A. Akalin J.P. Junker D.Y.R. Stainier D. Garfield U. Ohler S.A. Lacadie March 18, 2019 / Nucleic Acids Res Alternative 3' UTRs direct localization of functionally diverse protein isoforms in neuronal compartments C. Ciolli Mattioli A. Rom V. Franke K. Imami G. Arrey M. Terne A. Woehler A. Akalin I. Ulitsky M. Chekulaeva April 11, 2024 / Nat Commun Pathogenic mutations of human phosphorylation sites affect protein–protein interactions T. Rrustemi K. Meyer Y. Roske B. Uyar A. Akalin K. Imami Y. Ishihama O. Daumke M. Selbach September 10, 2018 / Dev Cell FACT sets a barrier for cell fate reprogramming in Caenorhabditis elegans and human cells E. Kolundzic A. Ofenbauer S.I. Bulut B. Uyar G. Baytek A. Sommermeier S. Seelk M. He A. Hirsekorn D. Vucicevic A. Akalin S. Diecke S.A. Lacadie B. Tursun September 20, 2018 / Cell Mutations in disordered regions can cause disease by creating dileucine motifs K. Meyer M. Kirchner B. Uyar J.Y. Cheng G. Russo L.R. Hernandez-Miranda A. Szymborska H. Zauber I.M. Rudolph T.E. Willnow A. Akalin V. Haucke H. Gerhardt C. Birchmeier R. Kühn M. Krauss S. Diecke J.M. Pascual M. Selbach July 03, 2017 / Nucleic Acids Res The RNA workbench: best practices for RNA and high-throughput sequencing bioinformatics in Galaxy B.A. Grüning J. Fallmann D. Yusuf S. Will A. Erxleben F. Eggenhofer T. Houwaart B. Batut P. Videm A. Bagnacani M. Wolfien S.C. Lott Y. Hoogstrate W.R. Hess O. Wolkenhauer S. Hoffmann A. Akalin U. Ohler P.F. Stadler R. Backofen September 19, 2017 / Nat Commun RNA localization is a key determinant of neurite-enriched proteome A. Zappulo D. van den Bruck C. Ciolli Mattioli V. Franke K. Imami E. McShane M. Moreno-Estelles L. Calviello A. Filipchyk E. Peguero-Sanchez T. Müller A. Woehler C. Birchmeier E. Merino N. Rajewsky U. Ohler E.O. Mazzoni M. Selbach A. Akalin M. Chekulaeva October 31, 2017 / Genome Biol Widespread activation of antisense transcription of the host genome during herpes simplex virus 1 infection E. Wyler J. Menegatti V. Franke C. Kocks A. Boltengagen T. Hennig K. Theil A. Rutkowski C. Ferrai L. Baer L. Kermas C. Friedel N. Rajewsky A. Akalin L. Dölken F. Grässer M. Landthaler Pagination Current page 1 Page 2 Next page Next › Last page Last »
March 19, 2021 / iScience Transcriptomic profiling of SARS-CoV-2 infected human cell lines identifies HSP90 as target for COVID-19 therapy E. Wyler K. Mösbauer V. Franke A. Diag L.T. Gottula R. Arsiè F. Klironomos D. Koppstein K. Hönzke S. Ayoub C. Buccitelli K. Hoffmann A. Richter I. Legnini A. Ivanov T. Mari S. Del Giudice J. Papies S. Praktiknjo T.F. Meyer M.A. Müller D. Niemeyer A. Hocke M. Selbach A. Akalin N. Rajewsky C. Drosten M. Landthaler
February 01, 2022 / Nat Mach Intell Simultaneous dimensionality reduction and integration for single-cell ATAC-seq data using deep learning W. Kopp A. Akalin U. Ohler
January 13, 2022 / Cell Genom Single-cell-resolved dynamics of chromatin architecture delineate cell and regulatory states in zebrafish embryos A.C. McGarvey W. Kopp D. Vučićević K. Mattonet R. Kempfer A. Hirsekorn I. Bilić M. Gil A. Trinks A.M. Merks D. Panáková A. Pombo A. Akalin J.P. Junker D.Y.R. Stainier D. Garfield U. Ohler S.A. Lacadie
March 18, 2019 / Nucleic Acids Res Alternative 3' UTRs direct localization of functionally diverse protein isoforms in neuronal compartments C. Ciolli Mattioli A. Rom V. Franke K. Imami G. Arrey M. Terne A. Woehler A. Akalin I. Ulitsky M. Chekulaeva
April 11, 2024 / Nat Commun Pathogenic mutations of human phosphorylation sites affect protein–protein interactions T. Rrustemi K. Meyer Y. Roske B. Uyar A. Akalin K. Imami Y. Ishihama O. Daumke M. Selbach
September 10, 2018 / Dev Cell FACT sets a barrier for cell fate reprogramming in Caenorhabditis elegans and human cells E. Kolundzic A. Ofenbauer S.I. Bulut B. Uyar G. Baytek A. Sommermeier S. Seelk M. He A. Hirsekorn D. Vucicevic A. Akalin S. Diecke S.A. Lacadie B. Tursun
September 20, 2018 / Cell Mutations in disordered regions can cause disease by creating dileucine motifs K. Meyer M. Kirchner B. Uyar J.Y. Cheng G. Russo L.R. Hernandez-Miranda A. Szymborska H. Zauber I.M. Rudolph T.E. Willnow A. Akalin V. Haucke H. Gerhardt C. Birchmeier R. Kühn M. Krauss S. Diecke J.M. Pascual M. Selbach
July 03, 2017 / Nucleic Acids Res The RNA workbench: best practices for RNA and high-throughput sequencing bioinformatics in Galaxy B.A. Grüning J. Fallmann D. Yusuf S. Will A. Erxleben F. Eggenhofer T. Houwaart B. Batut P. Videm A. Bagnacani M. Wolfien S.C. Lott Y. Hoogstrate W.R. Hess O. Wolkenhauer S. Hoffmann A. Akalin U. Ohler P.F. Stadler R. Backofen
September 19, 2017 / Nat Commun RNA localization is a key determinant of neurite-enriched proteome A. Zappulo D. van den Bruck C. Ciolli Mattioli V. Franke K. Imami E. McShane M. Moreno-Estelles L. Calviello A. Filipchyk E. Peguero-Sanchez T. Müller A. Woehler C. Birchmeier E. Merino N. Rajewsky U. Ohler E.O. Mazzoni M. Selbach A. Akalin M. Chekulaeva
October 31, 2017 / Genome Biol Widespread activation of antisense transcription of the host genome during herpes simplex virus 1 infection E. Wyler J. Menegatti V. Franke C. Kocks A. Boltengagen T. Hennig K. Theil A. Rutkowski C. Ferrai L. Baer L. Kermas C. Friedel N. Rajewsky A. Akalin L. Dölken F. Grässer M. Landthaler