Scientific Publications Search Search Author Release Date Research Group Search Sort by RelevanceFrom A-ZAuthored onDate/Time RangeRelease date Order AscDesc Adami, Eleonora Dr. (1) Akalin, Altuna Dr. (9) Birchmeier-Kohler, Carmen Prof. Dr. (1) Blachut, Susanne (1) Chekulaeva, Marina Dr. (1) Daumke, Oliver Prof. Dr. (1) Ghanbari, Mahsa Dr. (1) Hirsekorn, Antje (2) Hübner, Norbert Prof. Dr. (2) Hummel, Oliver (1) Kastelic, Nicolai (1) Kempa, Stefan Dr. (2) Kirchner, Marieluise Dr. (1) Kocks, Christine Dr. (2) Kolesnichenko, Marina Dr. (1) Lahmann, Ines Dr. (1) Landthaler, Markus Prof. Dr. (5) Lindberg, Eric Lars-Helge (1) Mastrobuoni, Guido Dr. (1) Mathas, Stephan Dr. (1) Müthel, Stefanie (1) Obermayer-Wasserscheid, Benedikt Dr. (1) Patone, Giannino Dr. (2) Rajewsky, Klaus Prof. Dr. (1) Scheidereit, Claus Prof. Dr. (1) Selbach, Matthias Prof. Dr. (1) Tursun, Baris Dr. (2) Uyar, Bora Dr. (2) Woehler, Andrew Dr. (1) Wurmus, Ricardo (4) Wyler, Emanuel Dr. (3) (-) Diecke, Sebastian Dr. (1) (-) Franke, Vedran Dr. (4) (-) Maatz, Henrike Dr. (1) (-) Mertins, Philipp Dr. (1) (-) Ohler, Uwe Prof. Dr. (4) (-) Rajewsky, Nikolaus Prof. Dr. (3) 2011 (1) 2012 (1) 2013 (2) 2014 (2) 2015 (4) 2016 (4) 2017 (8) 2018 (6) (-) 2019 (10) 2020 (3) 2021 (8) 2022 (9) 2023 (6) 2024 (1) (-) Bioinformatics and Omics Data Science (7) Biology of Malignant Lymphomas (1) Cellular Neurosciences (1) Computational Regulatory Genomics (5) Developmental Biology / Signal Transduction (3) Genetics and Genomics of Cardiovascular Diseases (2) Immune Regulation and Cancer (1) Myology (1) Non-coding RNAs and Mechanisms of Cytoplasmic Gene Regulation (2) Pluripotent Stem Cells (5) Proteome Dynamics (4) Proteomics (7) Proteomics and Metabolomics (1) Proteomics and Molecular Mechanisms of Neurodegenerative Diseases (1) (-) RNA Biology and Posttranscriptional Regulation (4) Structural Biology of Membrane-Associated Processes (1) Systems Biology Imaging (1) Systems Biology of Gene Regulatory Elements (9) 10 Results: Active Filter: Diecke, Sebastian Dr.Franke, Vedran Dr.Maatz, Henrike Dr.Mertins, Philipp Dr.Ohler, Uwe Prof. Dr.Rajewsky, Nikolaus Prof. Dr.Bioinformatics and Omics Data ScienceRNA Biology and Posttranscriptional Regulation2019 Sort: Result score Newest to oldest Oldest to newest April 09, 2019 / Nat Commun Global identification of functional microRNA-mRNA interactions in Drosophila H.H. Wessels S. Lebedeva A. Hirsekorn R. Wurmus A. Akalin N. Mukherjee U. Ohler June 20, 2019 / Nucleic Acids Res HOT or not: examining the basis of high-occupancy target regions K. Wreczycka V. Franke B. Uyar R. Wurmus S. Bulut B. Tursun A. Akalin June 27, 2019 / Cell The translational landscape of the human heart S. van Heesch F. Witte V. Schneider-Lunitz J.F. Schulz E. Adami A. Faber M. Kirchner H. Maatz S. Blachut C.L. Sandmann M. Kanda C.L. Worth S. Schafer L. Calviello R. Merriott G. Patone O. Hummel E. Wyler B. Obermayer M. Mücke E.L. Lindberg F. Trnka S. Memczak M. Schilling L.E. Felkin P.J.R. Barton N.M. Quaife K. Vanezis S. Diecke M. Mukai N. Mah S.J. Oh A. Kurtz C. Schramm D. Schwinge M. Sebode M. Harakalova F.W. Asselbergs A. Vink R.A. de Weger S. Viswanathan A.A. Widjaja A. Gärtner-Rommel H. Milting C. Dos Remedios C. Knosalla P. Mertins M. Landthaler M. Vingron W.A. Linke J.G. Seidman C.E. Seidman N. Rajewsky U. Ohler S.A. Cook N. Hubner December 01, 2019 / Histopathology Distinct genetic alterations and luminal molecular subtype in nested variant of urothelial carcinoma (NVUC) V. Weyerer R. Weisser E.A. Moskalev F. Haller R. Stoehr M. Eckstein U. Zinnall N.T. Gaisa E. Compérat A. Perren B. Keck Y. Allory G. Kristiansen B. Wullich A. Agaimy A. Hartmann S. Bertz October 25, 2019 / Nat Commun Single-cell RNA-sequencing of herpes simplex virus 1-infected cells connects NRF2 activation to an antiviral program E. Wyler V. Franke J. Menegatti C. Kocks A. Boltengagen S. Praktiknjo B. Walch-Rückheim J. Bosse N. Rajewsky F. Grässer A. Akalin M. Landthaler November 07, 2019 / Genes Dev Context-specific regulation of cell survival by a miRNA-controlled BIM rheostat V. Labi S. Peng F. Klironomos M. Munschauer N. Kastelic T. Chakraborty K. Schoeler E. Derudder M. Martella G. Mastrobuoni L.R. Hernandez-Miranda I. Lahmann C. Kocks C. Birchmeier S. Kempa L. Quintanilla-Martinez de Fend M. Landthaler N. Rajewsky K. Rajewsky January 25, 2019 / Nucleic Acids Res Deciphering human ribonucleoprotein regulatory networks N. Mukherjee H.H. Wessels S. Lebedeva M. Sajek M. Ghanbari A. Garzia A. Munteanu D. Yusuf T. Farazi J.I. Hoell K.M. Akat A. Akalin T. Tuschl U. Ohler March 18, 2019 / Nucleic Acids Res Alternative 3' UTRs direct localization of functionally diverse protein isoforms in neuronal compartments C. Ciolli Mattioli A. Rom V. Franke K. Imami G. Arrey M. Terne A. Woehler A. Akalin I. Ulitsky M. Chekulaeva March 28, 2019 / Blood Autocrine LTA signaling drives NF-κB and JAK-STAT activity and myeloid gene expression in Hodgkin lymphoma L. von Hoff E. Kärgel V. Franke E. McShane K.W. Schulz-Beiss G. Patone N. Schleussner M. Kolesnichenko N. Hübner O. Daumke M. Selbach A. Akalin S. Mathas C. Scheidereit February 21, 2019 / Genome Biol Reproducible inference of transcription factor footprints in ATAC-seq and DNase-seq datasets using protocol-specific bias modeling A. Karabacak Calviello A. Hirsekorn R. Wurmus D. Yusuf U. Ohler
April 09, 2019 / Nat Commun Global identification of functional microRNA-mRNA interactions in Drosophila H.H. Wessels S. Lebedeva A. Hirsekorn R. Wurmus A. Akalin N. Mukherjee U. Ohler
June 20, 2019 / Nucleic Acids Res HOT or not: examining the basis of high-occupancy target regions K. Wreczycka V. Franke B. Uyar R. Wurmus S. Bulut B. Tursun A. Akalin
June 27, 2019 / Cell The translational landscape of the human heart S. van Heesch F. Witte V. Schneider-Lunitz J.F. Schulz E. Adami A. Faber M. Kirchner H. Maatz S. Blachut C.L. Sandmann M. Kanda C.L. Worth S. Schafer L. Calviello R. Merriott G. Patone O. Hummel E. Wyler B. Obermayer M. Mücke E.L. Lindberg F. Trnka S. Memczak M. Schilling L.E. Felkin P.J.R. Barton N.M. Quaife K. Vanezis S. Diecke M. Mukai N. Mah S.J. Oh A. Kurtz C. Schramm D. Schwinge M. Sebode M. Harakalova F.W. Asselbergs A. Vink R.A. de Weger S. Viswanathan A.A. Widjaja A. Gärtner-Rommel H. Milting C. Dos Remedios C. Knosalla P. Mertins M. Landthaler M. Vingron W.A. Linke J.G. Seidman C.E. Seidman N. Rajewsky U. Ohler S.A. Cook N. Hubner
December 01, 2019 / Histopathology Distinct genetic alterations and luminal molecular subtype in nested variant of urothelial carcinoma (NVUC) V. Weyerer R. Weisser E.A. Moskalev F. Haller R. Stoehr M. Eckstein U. Zinnall N.T. Gaisa E. Compérat A. Perren B. Keck Y. Allory G. Kristiansen B. Wullich A. Agaimy A. Hartmann S. Bertz
October 25, 2019 / Nat Commun Single-cell RNA-sequencing of herpes simplex virus 1-infected cells connects NRF2 activation to an antiviral program E. Wyler V. Franke J. Menegatti C. Kocks A. Boltengagen S. Praktiknjo B. Walch-Rückheim J. Bosse N. Rajewsky F. Grässer A. Akalin M. Landthaler
November 07, 2019 / Genes Dev Context-specific regulation of cell survival by a miRNA-controlled BIM rheostat V. Labi S. Peng F. Klironomos M. Munschauer N. Kastelic T. Chakraborty K. Schoeler E. Derudder M. Martella G. Mastrobuoni L.R. Hernandez-Miranda I. Lahmann C. Kocks C. Birchmeier S. Kempa L. Quintanilla-Martinez de Fend M. Landthaler N. Rajewsky K. Rajewsky
January 25, 2019 / Nucleic Acids Res Deciphering human ribonucleoprotein regulatory networks N. Mukherjee H.H. Wessels S. Lebedeva M. Sajek M. Ghanbari A. Garzia A. Munteanu D. Yusuf T. Farazi J.I. Hoell K.M. Akat A. Akalin T. Tuschl U. Ohler
March 18, 2019 / Nucleic Acids Res Alternative 3' UTRs direct localization of functionally diverse protein isoforms in neuronal compartments C. Ciolli Mattioli A. Rom V. Franke K. Imami G. Arrey M. Terne A. Woehler A. Akalin I. Ulitsky M. Chekulaeva
March 28, 2019 / Blood Autocrine LTA signaling drives NF-κB and JAK-STAT activity and myeloid gene expression in Hodgkin lymphoma L. von Hoff E. Kärgel V. Franke E. McShane K.W. Schulz-Beiss G. Patone N. Schleussner M. Kolesnichenko N. Hübner O. Daumke M. Selbach A. Akalin S. Mathas C. Scheidereit
February 21, 2019 / Genome Biol Reproducible inference of transcription factor footprints in ATAC-seq and DNase-seq datasets using protocol-specific bias modeling A. Karabacak Calviello A. Hirsekorn R. Wurmus D. Yusuf U. Ohler