Scientific Publications Search Search Author Release Date Research Group Search Sort by RelevanceFrom A-ZAuthored onDate/Time RangeRelease date Order AscDesc Adami, Eleonora Dr. (1) Akalin, Altuna Dr. (3) Birchmeier-Kohler, Carmen Prof. Dr. (1) Blachut, Susanne (1) Franke, Vedran Dr. (1) Ghanbari, Mahsa Dr. (1) Hirsekorn, Antje (2) Hübner, Norbert Prof. Dr. (1) Hummel, Oliver (1) Kastelic, Nicolai (1) Kempa, Stefan Dr. (1) Kirchner, Marieluise Dr. (1) Kocks, Christine Dr. (2) Lahmann, Ines Dr. (1) Landthaler, Markus Prof. Dr. (8) Lindberg, Eric Lars-Helge (1) Mastrobuoni, Guido Dr. (1) Mertins, Philipp Dr. (1) Mücke, Michael Benedikt (1) Obermayer-Wasserscheid, Benedikt Dr. (1) Patone, Giannino Dr. (1) Rajewsky, Klaus Prof. Dr. (1) Rajewsky, Nikolaus Prof. Dr. (4) Selbach, Matthias Prof. Dr. (2) Wurmus, Ricardo (2) Wyler, Emanuel Dr. (3) (-) Diecke, Sebastian Dr. (1) (-) Maatz, Henrike Dr. (1) (-) Ohler, Uwe Prof. Dr. (12) 1999 (2) 2000 (3) 2001 (2) 2002 (1) 2004 (2) 2005 (1) 2006 (6) 2007 (5) 2008 (1) 2009 (4) 2010 (9) (-) 2011 (7) 2012 (10) 2013 (8) 2014 (8) 2015 (5) 2016 (8) 2017 (14) 2018 (9) (-) 2019 (6) 2020 (9) 2021 (6) 2022 (15) 2023 (5) AG Müller/Dechend (ECRC) (1) Bioinformatics and Omics Data Science (3) (-) Computational Regulatory Genomics (12) Genetics and Genomics of Cardiovascular Diseases (1) Hypertension-caused End-Organ Damage (1) Hypertension-Mediated End-Organ Damage (1) Pluripotent Stem Cells (5) Proteome Dynamics (1) Proteomics (1) Proteomics and Molecular Mechanisms of Neurodegenerative Diseases (1) (-) RNA Biology and Posttranscriptional Regulation (2) Systems Biology of Gene Regulatory Elements (1) 13 Results: Active Filter: Diecke, Sebastian Dr.Maatz, Henrike Dr.Ohler, Uwe Prof. Dr.Computational Regulatory GenomicsRNA Biology and Posttranscriptional Regulation20112019 Sort: Result score Newest to oldest Oldest to newest November 17, 2011 / Cell Host Microbe Viral microRNA targetome of KSHV-infected primary effusion lymphoma cell lines E. Gottwein D.L. Corcoran N. Mukherjee R.L. Skalsky M. Hafner J.D. Nusbaum P. Shamulailatpam C.L. Love S.S. Dave T. Tuschl U. Ohler B.R. Cullen August 18, 2011 / Genome Biol PARalyzer: definition of RNA binding sites from PAR-CLIP short-read sequence data D.L. Corcoran S. Georgiev N. Mukherjee E. Gottwein R.L. Skalsky J.D. Keene U. Ohler July 01, 2011 / PLoS Comput Biol Automatic annotation of spatial expression patterns via sparse Bayesian factor models I. Pruteanu-Malinici D.L. Mace U. Ohler August 05, 2011 / Mol Cell Integrative regulatory mapping indicates that the RNA-binding protein HuR couples pre-mRNA processing and mRNA stability N. Mukherjee D.L. Corcoran J.D. Nusbaum D.W. Reid S. Georgiev M. Hafner M. Ascano T. Tuschl U. Ohler J.D. Keene June 06, 2011 / PLoS ONE Assessing the utility of thermodynamic features for microRNA target prediction under relaxed seed and no conservation requirements P. Lekprasert M. Mayhew U. Ohler January 13, 2011 / PLoS Genet Transcription initiation patterns indicate divergent strategies for gene regulation at the chromatin level E.A. Rach D.R. Winter A.M. Benjamin D.L. Corcoran T. Ni J. Zhu U. Ohler January 18, 2011 / Mol Syst Biol A stele-enriched gene regulatory network in the Arabidopsis root S.M. Brady L. Zhang M. Megraw N.J. Martinez E. Jiang C.S. Yi W. Liu A. Zeng M. Taylor-Teeples D. Kim S. Ahnert U. Ohler D. Ware A.J.M. Walhout P.N. Benfey January 25, 2019 / Nucleic Acids Res Deciphering human ribonucleoprotein regulatory networks N. Mukherjee H.H. Wessels S. Lebedeva M. Sajek M. Ghanbari A. Garzia A. Munteanu D. Yusuf T. Farazi J.I. Hoell K.M. Akat A. Akalin T. Tuschl U. Ohler February 21, 2019 / Genome Biol Reproducible inference of transcription factor footprints in ATAC-seq and DNase-seq datasets using protocol-specific bias modeling A. Karabacak Calviello A. Hirsekorn R. Wurmus D. Yusuf U. Ohler March 01, 2019 / Nat Commun Purification of cross-linked RNA-protein complexes by phenol-toluol extraction E.C. Urdaneta C.H. Vieira-Vieira T. Hick H.H. Wessels D. Figini R. Moschall J. Medenbach U. Ohler S. Granneman M. Selbach B.M. Beckmann Pagination Current page 1 Page 2 Next page Next › Last page Last »
November 17, 2011 / Cell Host Microbe Viral microRNA targetome of KSHV-infected primary effusion lymphoma cell lines E. Gottwein D.L. Corcoran N. Mukherjee R.L. Skalsky M. Hafner J.D. Nusbaum P. Shamulailatpam C.L. Love S.S. Dave T. Tuschl U. Ohler B.R. Cullen
August 18, 2011 / Genome Biol PARalyzer: definition of RNA binding sites from PAR-CLIP short-read sequence data D.L. Corcoran S. Georgiev N. Mukherjee E. Gottwein R.L. Skalsky J.D. Keene U. Ohler
July 01, 2011 / PLoS Comput Biol Automatic annotation of spatial expression patterns via sparse Bayesian factor models I. Pruteanu-Malinici D.L. Mace U. Ohler
August 05, 2011 / Mol Cell Integrative regulatory mapping indicates that the RNA-binding protein HuR couples pre-mRNA processing and mRNA stability N. Mukherjee D.L. Corcoran J.D. Nusbaum D.W. Reid S. Georgiev M. Hafner M. Ascano T. Tuschl U. Ohler J.D. Keene
June 06, 2011 / PLoS ONE Assessing the utility of thermodynamic features for microRNA target prediction under relaxed seed and no conservation requirements P. Lekprasert M. Mayhew U. Ohler
January 13, 2011 / PLoS Genet Transcription initiation patterns indicate divergent strategies for gene regulation at the chromatin level E.A. Rach D.R. Winter A.M. Benjamin D.L. Corcoran T. Ni J. Zhu U. Ohler
January 18, 2011 / Mol Syst Biol A stele-enriched gene regulatory network in the Arabidopsis root S.M. Brady L. Zhang M. Megraw N.J. Martinez E. Jiang C.S. Yi W. Liu A. Zeng M. Taylor-Teeples D. Kim S. Ahnert U. Ohler D. Ware A.J.M. Walhout P.N. Benfey
January 25, 2019 / Nucleic Acids Res Deciphering human ribonucleoprotein regulatory networks N. Mukherjee H.H. Wessels S. Lebedeva M. Sajek M. Ghanbari A. Garzia A. Munteanu D. Yusuf T. Farazi J.I. Hoell K.M. Akat A. Akalin T. Tuschl U. Ohler
February 21, 2019 / Genome Biol Reproducible inference of transcription factor footprints in ATAC-seq and DNase-seq datasets using protocol-specific bias modeling A. Karabacak Calviello A. Hirsekorn R. Wurmus D. Yusuf U. Ohler
March 01, 2019 / Nat Commun Purification of cross-linked RNA-protein complexes by phenol-toluol extraction E.C. Urdaneta C.H. Vieira-Vieira T. Hick H.H. Wessels D. Figini R. Moschall J. Medenbach U. Ohler S. Granneman M. Selbach B.M. Beckmann