Scientific Publications Search Search Author Impact Factor Release Date Research Group Search Sort by RelevanceFrom A-ZAuthored onDate/Time RangeRelease date Order AscDesc Adami, Eleonora Dr. (1) Altmueller, Janine Dr.med. (2) Annibale, Paolo Dr. (2) Bader, Michael Prof. Dr. (1) Bähring, Sylvia Dr. (1) Bahry, Ella Dr. (1) Barke, Niclas (1) Bartolomaeus, Theda (1) Berruezo Llacuna, Maria (2) Blachut, Susanne (1) Blume, Alexander Dr. (6) Borodina, Tatiana Dr. (2) Carvalho, Silvia Filipa (1) Chekulaeva, Marina Dr. (2) Chen, Wei Prof. Dr. (1) Chu, Van Trung Dr. (1) Conrad, Thomas Dr. (1) Costanza, Mariantonia Dr. (2) Daumke, Oliver Prof. Dr. (4) Del Giudice, Simone (1) Deter, Aylina (1) Diecke, Sebastian Dr. (68) Di Virgilio, Michela Prof. Dr. (3) Driesner, Madlen (1) Escobar Fernandez, Helena Dr. (4) Faxel, Miriam (1) Forslund, Sofia Dr. (1) Frahm-Barske, Silke Dr. (4) Franke, Vedran Dr. (22) Freimuth, Jonas (1) Fritsche, Raphaela Dr. (1) Genehr, Carolin (3) Gerhardt, Holger Prof. Dr. (1) Ghanbari, Mahsa Dr. (1) Gil, Marine (1) Gotthardt, Michael Prof. Dr. (1) Gouti, Mina Dr. (1) Graf, Robin Dr. (1) Harabula, Izabela-Cezara (1) Haucke, Volker Professor (2) Herzog, Margareta (1) Heuser, Arnd Dr. (1) Hinz, Michael Dr. (2) Hinze, Christian Dr. med. 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(1) Hirsekorn, Antje (4) Höpken, Uta Elisabeth PD Dr. (2) Hübner, Norbert Prof. Dr. (3) Hummel, Oliver (1) Irastorza Azcarate, Ibai Dr. (1) Izsvak, Zsuzsanna Dr. (1) Janz, Martin Dr. (3) Junker, Jan Philipp Prof. Dr. (1) Jüttner, Rene Dr. (1) Keller, Lisa (1) Kempa, Stefan Dr. (1) Kettenmann, Helmut Prof. Dr. (1) Klußmann, Enno PD Dr. (2) Kocks, Christine Dr. (2) Kolesnichenko, Marina Dr. (3) Krüger, Norman (2) Kühn, Ralf Dr. (2) Kukalev, Alexander Dr. (2) Kunz, Severine Dr. (1) Kurths, Silke (1) Lacadie, Scott Allen Dr. (3) Lahmann, Ines Dr. (1) Landthaler, Markus Prof. Dr. (6) Langanki, Reika (1) Lindberg, Eric Lars-Helge (1) Lisowski, Pawel Dr. (4) Liu, Tiannan (1) Lohse, Martin Prof. Dr. (1) Lusatis, Simone (1) Maatz, Henrike Dr. (1) Marg, Andreas Dr. (1) Marko, Lajos Dr. (1) Mathas, Stephan Dr. (3) Meijer, Mandy Dr. (1) Merks, Anne Margarete Dr. (1) Mertins, Philipp Dr. (2) Monti, Remo (1) Motta, Edyta (1) Müller, Dominik Prof. Dr. (1) Müller, Thomas Dr. (1) Müthel, Stefanie (3) Napieczynska, Hanna Dr. (1) Obermayer-Wasserscheid, Benedikt Dr. (1) Ofenbauer, Andreas Dr. (1) Ohler, Uwe Prof. Dr. (11) Panakova, Daniela Dr. (1) Patarcic, Inga Dr. (1) Patone, Giannino Dr. (2) Paul, Friedemann Prof. Dr. med. (1) Pombo, Ana Prof. Dr. (3) Popova, Elena Dr. (1) Popp, Oliver Dr. (1) Preibisch, Stephan Dr. (1) Prigione, Alessandro Prof. Dr. (8) Qadri, Fatimunnisa Dr. (1) Quedenau, Claudia (1) Rajewsky, Klaus Prof. Dr. (2) Rajewsky, Nikolaus Prof. Dr. (10) Rathgeber, Anja (1) Rehm, Armin Dr. (1) Roske, Yvette Dr. (1) Rrustemi, Trendelina (1) Rudolph, Ina-Maria Dr. (2) Ruiz Orera, Jorge Dr. (1) Rybak-Wolf, Agnieszka Dr. (1) Schaar, Claudia (1) Scheidereit, Claus Prof. Dr. (4) Schmidt-Ullrich, Ruth Dr. (1) Schmitt, Clemens Prof. Dr. (1) Schommer, Sandra (2) Semtner, Marcus Dr. (1) Serebreni, Leonid Dr. (1) Sholokh, Anastasiia (1) Siffrin, Volker (2) Spuler, Simone Prof. (5) Sunaga-Franze, Daniele Yumi Dr. (2) Szabo, Dominik (1) Taube, Martin (1) Telugu, Narasimha Swamy Dr. (14) Thieme, Christoph Dr. (1) Tursun, Baris Dr. (4) Uyar, Bora Dr. (15) Vucicevic, Dubravka (2) Wanker, Erich Prof. Dr. (4) Weidling, Hannah (1) Willimsky, Gerald Dr. (1) Willnow, Thomas Prof. Dr. (2) Winick-Ng, Warren Dr. (1) Woehler, Andrew Dr. (3) Wurmus, Ricardo (9) Wyler, Emanuel Dr. (5) Zampieri, Niccolo Dr. (1) Zea Redondo, Luna (1) Zühlke, Kerstin Dr. (1) Zywitza, Vera Dr. (4) (-) Akalin, Altuna Dr. (73) (-) Birchmeier-Kohler, Carmen Prof. Dr. (3) (-) Kirchner, Marieluise Dr. (2) (-) Selbach, Matthias Prof. Dr. (5) (-) von Kries, Jens Peter Dr. (1) (-) Zauber, Henrik Dr. (1) 2006 (2) 2007 (1) 2008 (1) 2009 (3) 2010 (3) 2011 (1) 2012 (4) 2013 (3) 2014 (3) 2015 (3) 2017 (6) 2018 (6) 2019 (10) 2020 (7) 2021 (8) 2022 (7) 2023 (6) 2024 (1) Advanced Light Microscopy (5) AG Müller/Dechend (ECRC) (4) AG Schreiber [ECRC] (3) Anchored Signalling (8) Animal Phenotyping (1) (-) Bioinformatics and Omics Data Science (73) Bioinformatics of RNA Structure and Transcriptome Regulation (1) Biology of Malignant Lymphomas (5) Cancer Genetics and Cellular Stress Responses (3) Cardiac MRI (2) Cell Biology of Immunity (1) Cellular Neurosciences (6) Computational Regulatory Genomics (19) Developmental Biology / Signal Transduction (174) Developmental Neurobiology (3) Development and Function of Neural Circuits (5) Electron Microscopy (1) Epigenetic Modifications in Neuroblastoma (1) Epigenetic Regulation and Chromatin Architecture (5) Experimental Ultrahigh-Field MR (67) Flow Cytometry (1) From Cell States to Function (1) Gastrointestinal Barrier, Regeneration and Carcinogenesis (1) Genetics and Genomics of Cardiovascular Diseases (17) Genetics of Congenital Heart Disease (1) Genetics of Metabolic and Reproductive Disorders (3) Genome Diversification & Integrity (5) Genome Engineering & Disease Models (4) Genomics (17) Host-microbiome factors in cardiovascular disease (1) Hypertension-caused End-Organ Damage (4) Hypertension-Mediated End-Organ Damage (4) Immune Regulation and Cancer (5) Innate Immunity & Neuroinflammation (7) Integrative Vascular Biology (1) Intracellular Proteolysis (4) Magnetic Resonance (67) Mathematical Cell Physiology (3) Mathematical Modelling of Cellular Processes (6) Microenvironmental Regulation in Autoimmunity and Cancer (5) Mobile DNA (4) Molecular Biology of Peptide Hormones (5) Molecular Cardiovascular Research (2) Molecular Oncology (2) Molecular Pathways in Cortical Development (2) Molecular Physiology of Somatic Sensation (12) Myology (8) Nephrology and Inflammatory Vascular Diseases (4) Neural Circuits and Behaviour (3) Neuroimmunology Laboratory (4) Non-coding RNAs and Mechanisms of Cytoplasmic Gene Regulation (8) Organoids (1) Out-patient Clinic for Neuroimmunology (8) Pancreatic Organoid Research and Disease Modeling (1) (-) Pluripotent Stem Cells (4) Protein Production and Characterization (3) Proteome Dynamics (129) Proteomics (38) Proteomics and Metabolomics (7) Proteomics and Molecular Mechanisms of Neurodegenerative Diseases (4) Psychoneuroimmunology (4) Quantitative Developmental Biology (1) RNA Biology and Posttranscriptional Regulation (27) Stem Cell Modeling of Development and Disease (1) Structural Biology of Membrane-Associated Processes (12) Synaptic Transmission and Plasticity (2) Systems Biology Imaging (4) Systems Biology of Gene Regulatory Elements (23) Transgenics (4) Translational Bioinformatics (9) Translational Cardiology and Functional Genomics (8) Translational Oncology of Solid Tumors (2) Translational Tumorimmunology (3) Tumor heterogeneity and treatment resistance in pediatric cancer (1) 75 Results: Active Filter: Akalin, Altuna Dr.Birchmeier-Kohler, Carmen Prof. Dr.Kirchner, Marieluise Dr.Selbach, Matthias Prof. Dr.von Kries, Jens Peter Dr.Zauber, Henrik Dr.Bioinformatics and Omics Data SciencePluripotent Stem Cells Sort: Result score Newest to oldest Oldest to newest March 19, 2021 / iScience Transcriptomic profiling of SARS-CoV-2 infected human cell lines identifies HSP90 as target for COVID-19 therapy E. Wyler K. Mösbauer V. Franke A. Diag L.T. Gottula R. Arsiè F. Klironomos D. Koppstein K. Hönzke S. Ayoub C. Buccitelli K. Hoffmann A. Richter I. Legnini A. Ivanov T. Mari S. Del Giudice J. Papies S. Praktiknjo T.F. Meyer M.A. Müller D. Niemeyer A. Hocke M. Selbach A. Akalin N. Rajewsky C. Drosten M. Landthaler April 13, 2021 / Cell Rep Parallel genetics of regulatory sequences using scalable genome editing in vivo J.J. Froehlich B. Uyar M. Herzog K. Theil P. Glažar A. Akalin N. Rajewsky October 19, 2021 / Nat Commun PHF3 regulates neuronal gene expression through the Pol II CTD reader domain SPOC L.M. Appel V. Franke M. Bruno I. Grishkovskaya A. Kasiliauskaite T. Kaufmann U.E. Schoeberl M.G. Puchinger S. Kostrhon C. Ebenwaldner M. Sebesta E. Beltzung K. Mechtler G. Lin A. Vlasova M. Leeb R. Pavri A. Stark A. Akalin R. Stefl C. Bernecky K. Djinovic-Carugo D. Slade October 26, 2021 / Cell Rep Lymphocyte access to lymphoma is impaired by high endothelial venule regression L. Menzel M. Zschummel T. Crowley V. Franke M. Grau C. Ulbricht A. Hauser V. Siffrin M. Bajénoff S.E. Acton A. Akalin G. Lenz G. Willimsky U.E. Höpken A. Rehm November 25, 2021 / Nature Cell-type specialization is encoded by specific chromatin topologies W. Winick-Ng A. Kukalev I. Harabula L. Zea-Redondo D. Szabó M. Meijer L. Serebreni Y. Zhang S. Bianco A.M. Chiariello I. Irastorza-Azcarate C.J. Thieme T.M. Sparks S. Carvalho L. Fiorillo F. Musella E. Irani E.T. Triglia A.A. Kolodziejczyk A. Abentung G. Apostolova E.J. Paul V. Franke R. Kempfer A. Akalin S.A. Teichmann G. Dechant M.A. Ungless M. Nicodemi L. Welch G. Castelo-Branco A. Pombo December 06, 2021 / Genome Biol The SEQC2 epigenomics quality control (EpiQC) study J. Foox J. Nordlund C. Lalancette T. Gong M. Lacey S. Lent B.W. Langhorst V.K.C. Ponnaluri L. Williams K.R. Padmanabhan R. Cavalcante A. Lundmark D. Butler C. Mozsary J. Gurvitch J.M. Greally M. Suzuki M. Menor M. Nasu A. Alonso C. Sheridan A. Scherer S. Bruinsma G. Golda A. Muszynska P.P. Łabaj M.A. Campbell F. Wos A. Raine U. Liljedahl T. Axelsson C. Wang Z. Chen Z. Yang J. Li X. Yang H. Wang A. Melnick S. Guo A. Blume V. Franke I. Ibanez de Caceres C. Rodriguez-Antolin R. Rosas J.W. Davis J. Ishii D.B. Megherbi W. Xiao W. Liao J. Xu H. Hong B. Ning W. Tong A. Akalin Y. Wang Y. Deng C.E. Mason June 24, 2021 / Sci Rep Predicting lethal courses in critically ill COVID-19 patients using a machine learning model trained on patients with non-COVID-19 viral pneumonia G. Lichtner F. Balzer S. Haufe N. Giesa F. Schiefenhövel M. Schmieding C. Jurth W. Kopp A. Akalin S.J. Schaller S. Weber-Carstens C. Spies F. von Dincklage January 01, 2020 Computational genomics with R A. Akalin March 15, 2021 / EMBO J Transcriptional repression of NFKBIA triggers constitutive IKK- and proteasome-independent p65/RelA activation in senescence M. Kolesnichenko N. Mikuda U.E. Höpken E. Kärgel B. Uyar A.B. Tufan M. Milanovic W. Sun I. Krahn K. Schleich L. von Hoff M. Hinz M. Willenbrock S. Jungmann A. Akalin S. Lee R. Schmidt-Ullrich C.A. Schmitt C. Scheidereit February 01, 2022 / Nat Mach Intell Simultaneous dimensionality reduction and integration for single-cell ATAC-seq data using deep learning W. Kopp A. Akalin U. Ohler Pagination Current page 1 Page 2 Page 3 Page 4 … Next page Next › Last page Last »
March 19, 2021 / iScience Transcriptomic profiling of SARS-CoV-2 infected human cell lines identifies HSP90 as target for COVID-19 therapy E. Wyler K. Mösbauer V. Franke A. Diag L.T. Gottula R. Arsiè F. Klironomos D. Koppstein K. Hönzke S. Ayoub C. Buccitelli K. Hoffmann A. Richter I. Legnini A. Ivanov T. Mari S. Del Giudice J. Papies S. Praktiknjo T.F. Meyer M.A. Müller D. Niemeyer A. Hocke M. Selbach A. Akalin N. Rajewsky C. Drosten M. Landthaler
April 13, 2021 / Cell Rep Parallel genetics of regulatory sequences using scalable genome editing in vivo J.J. Froehlich B. Uyar M. Herzog K. Theil P. Glažar A. Akalin N. Rajewsky
October 19, 2021 / Nat Commun PHF3 regulates neuronal gene expression through the Pol II CTD reader domain SPOC L.M. Appel V. Franke M. Bruno I. Grishkovskaya A. Kasiliauskaite T. Kaufmann U.E. Schoeberl M.G. Puchinger S. Kostrhon C. Ebenwaldner M. Sebesta E. Beltzung K. Mechtler G. Lin A. Vlasova M. Leeb R. Pavri A. Stark A. Akalin R. Stefl C. Bernecky K. Djinovic-Carugo D. Slade
October 26, 2021 / Cell Rep Lymphocyte access to lymphoma is impaired by high endothelial venule regression L. Menzel M. Zschummel T. Crowley V. Franke M. Grau C. Ulbricht A. Hauser V. Siffrin M. Bajénoff S.E. Acton A. Akalin G. Lenz G. Willimsky U.E. Höpken A. Rehm
November 25, 2021 / Nature Cell-type specialization is encoded by specific chromatin topologies W. Winick-Ng A. Kukalev I. Harabula L. Zea-Redondo D. Szabó M. Meijer L. Serebreni Y. Zhang S. Bianco A.M. Chiariello I. Irastorza-Azcarate C.J. Thieme T.M. Sparks S. Carvalho L. Fiorillo F. Musella E. Irani E.T. Triglia A.A. Kolodziejczyk A. Abentung G. Apostolova E.J. Paul V. Franke R. Kempfer A. Akalin S.A. Teichmann G. Dechant M.A. Ungless M. Nicodemi L. Welch G. Castelo-Branco A. Pombo
December 06, 2021 / Genome Biol The SEQC2 epigenomics quality control (EpiQC) study J. Foox J. Nordlund C. Lalancette T. Gong M. Lacey S. Lent B.W. Langhorst V.K.C. Ponnaluri L. Williams K.R. Padmanabhan R. Cavalcante A. Lundmark D. Butler C. Mozsary J. Gurvitch J.M. Greally M. Suzuki M. Menor M. Nasu A. Alonso C. Sheridan A. Scherer S. Bruinsma G. Golda A. Muszynska P.P. Łabaj M.A. Campbell F. Wos A. Raine U. Liljedahl T. Axelsson C. Wang Z. Chen Z. Yang J. Li X. Yang H. Wang A. Melnick S. Guo A. Blume V. Franke I. Ibanez de Caceres C. Rodriguez-Antolin R. Rosas J.W. Davis J. Ishii D.B. Megherbi W. Xiao W. Liao J. Xu H. Hong B. Ning W. Tong A. Akalin Y. Wang Y. Deng C.E. Mason
June 24, 2021 / Sci Rep Predicting lethal courses in critically ill COVID-19 patients using a machine learning model trained on patients with non-COVID-19 viral pneumonia G. Lichtner F. Balzer S. Haufe N. Giesa F. Schiefenhövel M. Schmieding C. Jurth W. Kopp A. Akalin S.J. Schaller S. Weber-Carstens C. Spies F. von Dincklage
March 15, 2021 / EMBO J Transcriptional repression of NFKBIA triggers constitutive IKK- and proteasome-independent p65/RelA activation in senescence M. Kolesnichenko N. Mikuda U.E. Höpken E. Kärgel B. Uyar A.B. Tufan M. Milanovic W. Sun I. Krahn K. Schleich L. von Hoff M. Hinz M. Willenbrock S. Jungmann A. Akalin S. Lee R. Schmidt-Ullrich C.A. Schmitt C. Scheidereit
February 01, 2022 / Nat Mach Intell Simultaneous dimensionality reduction and integration for single-cell ATAC-seq data using deep learning W. Kopp A. Akalin U. Ohler