Scientific Publications Search Search Author Impact Factor Release Date Research Group Search Sort by RelevanceFrom A-ZAuthored onDate/Time RangeRelease date Order AscDesc Adami, Eleonora Dr. (1) Akalin, Altuna Dr. (11) Begay-Müller, Valerie Dr. (1) Bernert, Carola (1) Birchmeier-Kohler, Carmen Prof. Dr. (1) Blachut, Susanne (1) Blankenstein, Thomas Prof. Dr. (1) Bunse, Mario Dr. (7) Chekulaeva, Marina Dr. (1) Chen, Chia-Yu (1) Chen, Wei Prof. Dr. (1) Daumke, Oliver Prof. Dr. (1) Diecke, Sebastian Dr. (2) Fiori, Agnese Dr. (1) Fischer, Cornelius Dr. (2) Franke, Vedran Dr. (2) Gerhardt, Holger Prof. Dr. (1) Gerlach, Kerstin (10) Ghanbari, Mahsa Dr. (5) Gil, Marine (1) Gotthardt, Michael Prof. Dr. (2) Henssen, Anton Prof. Dr. med. (2) Hinz, Michael Dr. (2) Höpken, Uta Elisabeth PD Dr. (81) Hübner, Norbert Prof. Dr. (2) Hummel, Oliver (1) Huryn, Viktoriia (1) Izsvak, Zsuzsanna Dr. (1) Janz, Martin Dr. (1) Junker, Jan Philipp Prof. Dr. (2) Kammertöns, Thomas Dr. (1) Kaufmann, Tom (1) Kempa, Stefan Dr. (1) Kettritz, Ralph Prof. Dr. (2) Kirchner, Marieluise Dr. (1) Kobelt, Dennis Dr. (1) Kolesnichenko, Marina Dr. (2) Krüger, Kerstin (4) Lacadie, Scott Allen Dr. (10) Landthaler, Markus Prof. Dr. (11) Leutz, Achim Prof. Dr. (3) Lindberg, Eric Lars-Helge (1) Lupianez Garcia, Dario Jesus Dr. (1) Maatz, Henrike Dr. (1) Mastrobuoni, Guido Dr. (1) Mathas, Stephan Dr. (1) Merks, Anne Margarete Dr. (1) Mertins, Philipp Dr. (1) Mintcheva, Janita (1) Monti, Remo (5) Müller, Gerd Dr. (6) Müller, Thomas Dr. (1) Müthel, Stefanie (1) Neuschulz, Anika (1) Nguyen, Tam Hoai Dr. (1) Obermayer-Wasserscheid, Benedikt Dr. (4) Ofenbauer, Andreas Dr. (1) Ohler, Uwe Prof. Dr. (144) Panakova, Daniela Dr. (1) Patone, Giannino Dr. (1) Pezzutto, Antonio Prof. Dr. (1) Pombo, Ana Prof. Dr. (1) Preibisch, Stephan Dr. (1) Prigione, Alessandro Prof. Dr. (1) Räbel, Katrin (1) Rajewsky, Nikolaus Prof. Dr. (5) Rautenstrauch, Pia Josefine (3) Rehm, Armin Dr. (33) Röefzaad, Claudia (1) Rousselle, Anthony (1) Ruiz Orera, Jorge Dr. (1) Sander, Maike Prof. Dr. (1) Sapozhnikova, Valeriia (1) Scheidereit, Claus Prof. Dr. (3) Schmidt-Ullrich, Ruth Dr. (2) Schmitt, Clemens Prof. Dr. (1) Schreiber, Adrian PD Dr. med. (1) Schwarz, Roland Dr. (2) Selbach, Matthias Prof. Dr. (11) Siffrin, Volker (1) Sprink, Thiemo Dr. (1) Streck, Adam Dr. (1) Tursun, Baris Dr. (2) Uckert, Wolfgang Prof. Dr. (4) Uyar, Bora Dr. (3) Villamil, Gabriel (1) Vucicevic, Dubravka (3) Walther, Wolfgang Prof. Dr. (1) Willimsky, Gerald Dr. (3) Willnow, Thomas Prof. Dr. (1) Wirges, Anthea Dr. (3) Woehler, Andrew Dr. (1) Wolf, Jana Prof. Dr. (1) Wurmus, Ricardo (3) Wyler, Emanuel Dr. (3) Yilmaz, Zekiye Buket Dr. (1) Zauber, Henrik Dr. (2) Zimmermann, Karin Dr. (1) Zinzen, Robert Patrick Dr. (3) (-) Beule, Dieter Dr. (4) (-) Hirsekorn, Antje (12) 2015 (1) 2016 (2) 2017 (3) 2018 (2) 2019 (4) 2020 (2) 2021 (3) 2022 (8) Advanced Light Microscopy (1) AG Müller/Dechend (ECRC) (8) Anchored Signalling (3) Animal Phenotyping (3) Bioinformatics and Omics Data Science (5) Biology of Malignant Lymphomas (1) Biomedical Image Analysis (1) Cellular Neurosciences (4) Computational methodologies and omic analytics (1) (-) Computational Regulatory Genomics (23) Epigenetic Regulation and Chromatin Architecture (2) Flow Cytometry (1) From Cell States to Function (1) Genetics and Genomics of Cardiovascular Diseases (15) Genetics of Congenital Heart Disease (4) Genome Engineering & Disease Models (3) Genomics (5) Host-microbiome factors in cardiovascular disease (2) Hypertension-caused End-Organ Damage (8) Hypertension-Mediated End-Organ Damage (8) Immune Regulation and Cancer (4) Integrative Vascular Biology (1) Mechanism-based Cancer Therapies (4) (-) Microenvironmental Regulation in Autoimmunity and Cancer (2) Mobile DNA (1) Molecular Biology of Peptide Hormones (2) Molecular Cardiovascular Research (2) Molecular Genetics of Chronic Inflammation and Allergic Disease (2) Molecular Immunology and Gene Therapy (6) Non-coding RNAs and Mechanisms of Cytoplasmic Gene Regulation (1) Organoids (1) Pancreatic Organoid Research and Disease Modeling (1) Pluripotent Stem Cells (2) Proteome Dynamics (8) Proteomics (8) Proteomics and Metabolomics (2) Proteomics and Molecular Mechanisms of Neurodegenerative Diseases (2) Psychoneuroimmunology (4) Quantitative Developmental Biology (3) RNA Biology and Posttranscriptional Regulation (18) Systems Biology of Gene Regulatory Elements (8) Systems Hematology, Stem Cells & Precision Medicine (2) Transgenics (3) Translational Bioinformatics (100) Translational Cardiology and Functional Genomics (1) Translational Organ Models (2) Translational Tumorimmunology (1) 25 Results: Active Filter: Beule, Dieter Dr.Hirsekorn, AntjeComputational Regulatory GenomicsMicroenvironmental Regulation in Autoimmunity and Cancer Sort: Result score Newest to oldest Oldest to newest June 24, 2021 / bioRxiv Timed global reorganization of protein synthesis during neocortex neurogenesis at codon resolution D. Harnett M.C. Ambrozkiewicz U. Zinnall E. Borisova A. Rusanova R. Dannenberg K. Imami A. Münster-Wandowski B. Fauler T. Mielke M. Selbach M. Landthaler C.M.T. Spahn V. Tarabykin U. Ohler M.L. Kraushar January, 2017 / Nat Struct Mol Biol Integrative classification of human coding and noncoding genes through RNA metabolism profiles N. Mukherjee L. Calviello A. Hirsekorn S. de Pretis M. Pelizzola U. Ohler February 02, 2017 / Cell Stem Cell A multi-step transcriptional and chromatin state cascade underlies motor neuron programming from embryonic stem cells S. Velasco M.M. Ibrahim A. Kakumanu G. Garipler B. Aydin M.A. Al-Sayegh A. Hirsekorn F. Abdul-Rahman R. Satija U. Ohler S. Mahony E.O. Mazzoni August, 2017 / Genome Res DDX54 regulates transcriptome dynamics during DNA damage response M. Milek K. Imami N. Mukherjee F. De Bortoli U. Zinnall O. Hazapis C. Trahan M. Oeffinger F. Heyd U. Ohler M. Selbach M. Landthaler 2016 / Methods Mol Biol Identifying RBP targets with RIP-seq H.H. Wessels A. Hirsekorn U. Ohler N. Mukherjee February, 2016 / Nat Methods Detecting actively translated open reading frames in ribosome profiling data L. Calviello N. Mukherjee E. Wyler H. Zauber A. Hirsekorn M. Selbach M. Landthaler B. Obermayer U. Ohler February 28, 2022 / Dev Cell A single-cell Arabidopsis root atlas reveals developmental trajectories in wild-type and cell identity mutants R. Shahan C.W. Hsu T.M. Nolan B.J. Cole I.W. Taylor L. Greenstreet S. Zhang A. Afanassiev A.H.C. Vlot G. Schiebinger P.N. Benfey U. Ohler January, 2020 / Nat Genet Extrachromosomal circular DNA drives oncogenic genome remodeling in neuroblastoma R.P. Koche E. Rodriguez-Fos K. Helmsauer M. Burkert I.C. MacArthur J. Maag R. Chamorro N. Munoz-Perez M. Puiggròs H. Dorado Garcia Y. Bei C. Röefzaad V. Bardinet A. Szymansky A. Winkler T. Thole N. Timme K. Kasack S. Fuchs F. Klironomos N. Thiessen E. Blanc K. Schmelz A. Künkele P. Hundsdörfer C. Rosswog J. Theissen D. Beule H. Deubzer S. Sauer J. Toedling M. Fischer F. Hertwig R.F. Schwarz A. Eggert D. Torrents J.H. Schulte A.G. Henssen February 21, 2019 / Genome Biol Reproducible inference of transcription factor footprints in ATAC-seq and DNase-seq datasets using protocol-specific bias modeling A. Karabacak Calviello A. Hirsekorn R. Wurmus D. Yusuf U. Ohler April 09, 2019 / Nat Commun Global identification of functional microRNA-mRNA interactions in Drosophila H.H. Wessels S. Lebedeva A. Hirsekorn R. Wurmus A. Akalin N. Mukherjee U. Ohler Pagination Current page 1 Page 2 Page 3 Next page Next › Last page Last »
June 24, 2021 / bioRxiv Timed global reorganization of protein synthesis during neocortex neurogenesis at codon resolution D. Harnett M.C. Ambrozkiewicz U. Zinnall E. Borisova A. Rusanova R. Dannenberg K. Imami A. Münster-Wandowski B. Fauler T. Mielke M. Selbach M. Landthaler C.M.T. Spahn V. Tarabykin U. Ohler M.L. Kraushar
January, 2017 / Nat Struct Mol Biol Integrative classification of human coding and noncoding genes through RNA metabolism profiles N. Mukherjee L. Calviello A. Hirsekorn S. de Pretis M. Pelizzola U. Ohler
February 02, 2017 / Cell Stem Cell A multi-step transcriptional and chromatin state cascade underlies motor neuron programming from embryonic stem cells S. Velasco M.M. Ibrahim A. Kakumanu G. Garipler B. Aydin M.A. Al-Sayegh A. Hirsekorn F. Abdul-Rahman R. Satija U. Ohler S. Mahony E.O. Mazzoni
August, 2017 / Genome Res DDX54 regulates transcriptome dynamics during DNA damage response M. Milek K. Imami N. Mukherjee F. De Bortoli U. Zinnall O. Hazapis C. Trahan M. Oeffinger F. Heyd U. Ohler M. Selbach M. Landthaler
2016 / Methods Mol Biol Identifying RBP targets with RIP-seq H.H. Wessels A. Hirsekorn U. Ohler N. Mukherjee
February, 2016 / Nat Methods Detecting actively translated open reading frames in ribosome profiling data L. Calviello N. Mukherjee E. Wyler H. Zauber A. Hirsekorn M. Selbach M. Landthaler B. Obermayer U. Ohler
February 28, 2022 / Dev Cell A single-cell Arabidopsis root atlas reveals developmental trajectories in wild-type and cell identity mutants R. Shahan C.W. Hsu T.M. Nolan B.J. Cole I.W. Taylor L. Greenstreet S. Zhang A. Afanassiev A.H.C. Vlot G. Schiebinger P.N. Benfey U. Ohler
January, 2020 / Nat Genet Extrachromosomal circular DNA drives oncogenic genome remodeling in neuroblastoma R.P. Koche E. Rodriguez-Fos K. Helmsauer M. Burkert I.C. MacArthur J. Maag R. Chamorro N. Munoz-Perez M. Puiggròs H. Dorado Garcia Y. Bei C. Röefzaad V. Bardinet A. Szymansky A. Winkler T. Thole N. Timme K. Kasack S. Fuchs F. Klironomos N. Thiessen E. Blanc K. Schmelz A. Künkele P. Hundsdörfer C. Rosswog J. Theissen D. Beule H. Deubzer S. Sauer J. Toedling M. Fischer F. Hertwig R.F. Schwarz A. Eggert D. Torrents J.H. Schulte A.G. Henssen
February 21, 2019 / Genome Biol Reproducible inference of transcription factor footprints in ATAC-seq and DNase-seq datasets using protocol-specific bias modeling A. Karabacak Calviello A. Hirsekorn R. Wurmus D. Yusuf U. Ohler
April 09, 2019 / Nat Commun Global identification of functional microRNA-mRNA interactions in Drosophila H.H. Wessels S. Lebedeva A. Hirsekorn R. Wurmus A. Akalin N. Mukherjee U. Ohler