Scientific Publications Search Search Author Impact Factor Release Date Research Group Search Sort by RelevanceFrom A-ZAuthored onDate/Time RangeRelease date Order AscDesc Akalin, Altuna Dr. (75) Altmueller, Janine Dr.med. (1) Annibale, Paolo Dr. (1) Bahry, Ella Dr. (1) Barke, Niclas (1) Berruezo Llacuna, Maria (1) Birchmeier-Kohler, Carmen Prof. Dr. (3) Blume, Alexander Dr. (6) Borodina, Tatiana Dr. (1) Carvalho, Silvia Filipa (1) Cerda Jara, Cledi Alicia (1) Chekulaeva, Marina Dr. (2) Chen, Wei Prof. Dr. (1) Chu, Van Trung Dr. (1) Costanza, Mariantonia Dr. (2) Daumke, Oliver Prof. Dr. (4) Del Giudice, Simone (1) Deter, Aylina (1) Diecke, Sebastian Dr. (2) Di Virgilio, Michela Prof. Dr. (2) Driesner, Madlen (1) Emmenegger, Lisa (1) Escobar Fernandez, Helena Dr. (1) Faxel, Miriam (1) Freimuth, Jonas (1) Gerhardt, Holger Prof. Dr. (1) Ghanbari, Mahsa Dr. (1) Gil, Marine (1) Graf, Robin Dr. (1) Harabula, Izabela-Cezara (1) Haucke, Volker Professor (1) Herzog, Margareta (1) Hinz, Michael Dr. (2) Hirsekorn, Antje (4) Höpken, Uta Elisabeth PD Dr. (2) Hübner, Norbert Prof. Dr. (1) Irastorza Azcarate, Ibai Dr. (1) Janz, Martin Dr. (3) Junker, Jan Philipp Prof. Dr. (1) Keller, Lisa (1) Kempa, Stefan Dr. (2) Kirchner, Marieluise Dr. (1) Kocks, Christine Dr. (2) Kolesnichenko, Marina Dr. (3) Kühn, Ralf Dr. (1) Kukalev, Alexander Dr. (2) Lacadie, Scott Allen Dr. (3) Landthaler, Markus Prof. Dr. (6) Lohse, Martin Prof. Dr. (1) Lusatis, Simone (1) Marg, Andreas Dr. (1) Mastrobuoni, Guido Dr. (1) Mathas, Stephan Dr. (3) Merks, Anne Margarete Dr. (1) Mertins, Philipp Dr. (1) Monti, Remo (1) Müller, Thomas Dr. (1) Müthel, Stefanie (3) Ofenbauer, Andreas Dr. (1) Ohler, Uwe Prof. Dr. (10) Oliveras Martinez, Anna Dr. (1) Panakova, Daniela Dr. (1) Patarcic, Inga Dr. (1) Patone, Giannino Dr. (1) Pombo, Ana Prof. Dr. (3) Popp, Oliver Dr. (1) Preibisch, Stephan Dr. (1) Prigione, Alessandro Prof. Dr. (1) Quedenau, Claudia (1) Rajewsky, Klaus Prof. Dr. (2) Rajewsky, Nikolaus Prof. Dr. (9) Rathgeber, Anja (1) Rehm, Armin Dr. (1) Roske, Yvette Dr. (1) Rudolph, Ina-Maria Dr. (1) Rybak-Wolf, Agnieszka Dr. (1) Scheidereit, Claus Prof. Dr. (4) Schmidt-Ullrich, Ruth Dr. (1) Schmitt, Clemens Prof. Dr. (1) Selbach, Matthias Prof. Dr. (5) Serebreni, Leonid Dr. (1) Siffrin, Volker (1) Spuler, Simone Prof. (2) Szabo, Dominik (1) Thieme, Christoph Dr. (1) Tursun, Baris Dr. (4) Uyar, Bora Dr. (15) Vucicevic, Dubravka (2) Willimsky, Gerald Dr. (1) Willnow, Thomas Prof. Dr. (1) Winick-Ng, Warren Dr. (1) Woehler, Andrew Dr. (4) Wurmus, Ricardo (10) Wyler, Emanuel Dr. (5) Zampieri, Niccolo Dr. (1) Zauber, Henrik Dr. (1) Zea Redondo, Luna (1) Zinzen, Robert Patrick Dr. (1) (-) Franke, Vedran Dr. (23) (-) Meijer, Mandy Dr. (1) 2015 (1) 2017 (2) 2018 (2) 2019 (4) 2020 (1) 2021 (6) 2022 (4) 2023 (4) Advanced Light Microscopy (3) Anchored Signalling (3) Angiogenesis & Metabolism Laboratory (1) Animal Phenotyping (1) (-) Bioinformatics and Omics Data Science (24) Biology of Malignant Lymphomas (3) Cancer Genetics and Cellular Stress Responses (3) Cellular Neurosciences (2) Computational Regulatory Genomics (1) Developmental Biology / Signal Transduction (3) Developmental Neurobiology (2) Epigenetic Regulation and Chromatin Architecture (2) Genetics and Genomics of Cardiovascular Diseases (5) Genomics (2) Immune Regulation and Cancer (1) Integrative Vascular Biology (14) Intracellular Proteolysis (5) Mathematical Cell Physiology (1) Mathematical Modelling of Cellular Processes (3) Microenvironmental Regulation in Autoimmunity and Cancer (1) Molecular Biology of Peptide Hormones (1) Molecular Cardiovascular Research (2) Molecular Pathways in Cortical Development (1) Molecular Physiology of Somatic Sensation (1) Myology (4) Nephrology and Inflammatory Vascular Diseases (2) Neuroimmunology Laboratory (1) Non-coding RNAs and Mechanisms of Cytoplasmic Gene Regulation (6) Organoids (1) Protein Production and Characterization (2) Proteome Dynamics (12) Proteomics (17) Proteomics and Molecular Mechanisms of Neurodegenerative Diseases (5) Psychoneuroimmunology (1) RNA Biology and Posttranscriptional Regulation (10) Structural Biology of Membrane-Associated Processes (5) Synaptic Transmission and Plasticity (1) Systems Biology Imaging (3) Systems Biology of Gene Regulatory Elements (7) Translational Bioinformatics (2) Translational Cardiology and Functional Genomics (1) Translational Oncology of Solid Tumors (6) Translational Tumorimmunology (2) Tumor heterogeneity and treatment resistance in pediatric cancer (1) 24 Results: Active Filter: Franke, Vedran Dr.Meijer, Mandy Dr.Bioinformatics and Omics Data Science Sort: Result score Newest to oldest Oldest to newest March 24, 2021 / bioRxiv Herpesviral induction of germline transcription factor DUX4 is critical for viral gene expression S. Walter V. Franke N. Drayman E. Wyler S. Tay M. Landthaler A. Akalin A. Ensser F. Full November 07, 2023 / Nat Commun Transcriptional reprogramming by mutated IRF4 in lymphoma N. Schleussner P. Cauchy V. Franke M. Giefing O. Fornes N. Vankadari S.A. Assi M. Costanza M.A. Weniger A. Akalin I. Anagnostopoulos T. Bukur M.G. Casarotto F. Damm O. Daumke B. Edginton-White J.C.M. Gebhardt M. Grau S. Grunwald M.L. Hansmann S. Hartmann L. Huber E. Kärgel S. Lusatis D. Noerenberg N. Obier U. Pannicke A. Fischer A. Reisser A. Rosenwald K. Schwarz S. Sundararaj A. Weilemann W. Winkler W. Xu G. Lenz K. Rajewsky W.W. Wasserman P.N. Cockerill C. Scheidereit R. Siebert R. Küppers R. Grosschedl M. Janz C. Bonifer S. Mathas November 30, 2023 / Nat Commun The SPOC proteins DIDO3 and PHF3 co-regulate gene expression and neuronal differentiation J. Benedum V. Franke L.M. Appel L. Walch M. Bruno R. Schneeweiss J. Gruber H. Oberndorfer E. Frank X. Strobl A. Polyansky B. Zagrovic A. Akalin D. Slade December 01, 2018 / GigaScience PiGx: reproducible genomics analysis pipelines with GNU Guix R. Wurmus B. Uyar B. Osberg V. Franke A. Gosdschan K. Wreczycka J. Ronen A. Akalin December 14, 2018 / EMBO J The IκB kinase complex is a regulator of mRNA stability N. Mikuda M. Kolesnichenko P. Beaudette O. Popp B. Uyar W. Sun A.B. Tufan B. Perder A. Akalin W. Chen P. Mertins G. Dittmar M. Hinz C. Scheidereit October 31, 2017 / Genome Biol Widespread activation of antisense transcription of the host genome during herpes simplex virus 1 infection E. Wyler J. Menegatti V. Franke C. Kocks A. Boltengagen T. Hennig K. Theil A. Rutkowski C. Ferrai L. Baer L. Kermas C. Friedel N. Rajewsky A. Akalin L. Dölken F. Grässer M. Landthaler April 01, 2015 / Bioinformatics genomation: a toolkit to summarize, annotate and visualize genomic intervals A. Akalin V. Franke K. Vlahoviček C.E. Mason D. Schübeler September 19, 2017 / Nat Commun RNA localization is a key determinant of neurite-enriched proteome A. Zappulo D. van den Bruck C. Ciolli Mattioli V. Franke K. Imami E. McShane M. Moreno-Estelles L. Calviello A. Filipchyk E. Peguero-Sanchez T. Müller A. Woehler C. Birchmeier E. Merino N. Rajewsky U. Ohler E.O. Mazzoni M. Selbach A. Akalin M. Chekulaeva December 11, 2020 / Nat Commun Single-nucleus transcriptomics reveals functional compartmentalization in syncytial skeletal muscle cells M. Kim V. Franke B. Brandt E.D. Lowenstein V. Schöwel S. Spuler A. Akalin C. Birchmeier March 18, 2019 / Nucleic Acids Res Alternative 3' UTRs direct localization of functionally diverse protein isoforms in neuronal compartments C. Ciolli Mattioli A. Rom V. Franke K. Imami G. Arrey M. Terne A. Woehler A. Akalin I. Ulitsky M. Chekulaeva Pagination Current page 1 Page 2 Page 3 Next page Next › Last page Last »
March 24, 2021 / bioRxiv Herpesviral induction of germline transcription factor DUX4 is critical for viral gene expression S. Walter V. Franke N. Drayman E. Wyler S. Tay M. Landthaler A. Akalin A. Ensser F. Full
November 07, 2023 / Nat Commun Transcriptional reprogramming by mutated IRF4 in lymphoma N. Schleussner P. Cauchy V. Franke M. Giefing O. Fornes N. Vankadari S.A. Assi M. Costanza M.A. Weniger A. Akalin I. Anagnostopoulos T. Bukur M.G. Casarotto F. Damm O. Daumke B. Edginton-White J.C.M. Gebhardt M. Grau S. Grunwald M.L. Hansmann S. Hartmann L. Huber E. Kärgel S. Lusatis D. Noerenberg N. Obier U. Pannicke A. Fischer A. Reisser A. Rosenwald K. Schwarz S. Sundararaj A. Weilemann W. Winkler W. Xu G. Lenz K. Rajewsky W.W. Wasserman P.N. Cockerill C. Scheidereit R. Siebert R. Küppers R. Grosschedl M. Janz C. Bonifer S. Mathas
November 30, 2023 / Nat Commun The SPOC proteins DIDO3 and PHF3 co-regulate gene expression and neuronal differentiation J. Benedum V. Franke L.M. Appel L. Walch M. Bruno R. Schneeweiss J. Gruber H. Oberndorfer E. Frank X. Strobl A. Polyansky B. Zagrovic A. Akalin D. Slade
December 01, 2018 / GigaScience PiGx: reproducible genomics analysis pipelines with GNU Guix R. Wurmus B. Uyar B. Osberg V. Franke A. Gosdschan K. Wreczycka J. Ronen A. Akalin
December 14, 2018 / EMBO J The IκB kinase complex is a regulator of mRNA stability N. Mikuda M. Kolesnichenko P. Beaudette O. Popp B. Uyar W. Sun A.B. Tufan B. Perder A. Akalin W. Chen P. Mertins G. Dittmar M. Hinz C. Scheidereit
October 31, 2017 / Genome Biol Widespread activation of antisense transcription of the host genome during herpes simplex virus 1 infection E. Wyler J. Menegatti V. Franke C. Kocks A. Boltengagen T. Hennig K. Theil A. Rutkowski C. Ferrai L. Baer L. Kermas C. Friedel N. Rajewsky A. Akalin L. Dölken F. Grässer M. Landthaler
April 01, 2015 / Bioinformatics genomation: a toolkit to summarize, annotate and visualize genomic intervals A. Akalin V. Franke K. Vlahoviček C.E. Mason D. Schübeler
September 19, 2017 / Nat Commun RNA localization is a key determinant of neurite-enriched proteome A. Zappulo D. van den Bruck C. Ciolli Mattioli V. Franke K. Imami E. McShane M. Moreno-Estelles L. Calviello A. Filipchyk E. Peguero-Sanchez T. Müller A. Woehler C. Birchmeier E. Merino N. Rajewsky U. Ohler E.O. Mazzoni M. Selbach A. Akalin M. Chekulaeva
December 11, 2020 / Nat Commun Single-nucleus transcriptomics reveals functional compartmentalization in syncytial skeletal muscle cells M. Kim V. Franke B. Brandt E.D. Lowenstein V. Schöwel S. Spuler A. Akalin C. Birchmeier
March 18, 2019 / Nucleic Acids Res Alternative 3' UTRs direct localization of functionally diverse protein isoforms in neuronal compartments C. Ciolli Mattioli A. Rom V. Franke K. Imami G. Arrey M. Terne A. Woehler A. Akalin I. Ulitsky M. Chekulaeva