Scientific Publications Search Search Author Impact Factor Release Date Research Group Search Sort by RelevanceFrom A-ZAuthored onDate/Time RangeRelease date Order AscDesc Akalin, Altuna Dr. (75) Altmueller, Janine Dr.med. (1) Annibale, Paolo Dr. (1) Bahry, Ella Dr. (1) Barke, Niclas (1) Berruezo Llacuna, Maria (1) Birchmeier-Kohler, Carmen Prof. Dr. (3) Blume, Alexander Dr. (6) Borodina, Tatiana Dr. (1) Carvalho, Silvia Filipa (1) Cerda Jara, Cledi Alicia (1) Chekulaeva, Marina Dr. (2) Chen, Wei Prof. Dr. (1) Chu, Van Trung Dr. (1) Costanza, Mariantonia Dr. (2) Daumke, Oliver Prof. Dr. (4) Del Giudice, Simone (1) Deter, Aylina (1) Diecke, Sebastian Dr. (2) Di Virgilio, Michela Prof. Dr. (2) Driesner, Madlen (1) Emmenegger, Lisa (1) Escobar Fernandez, Helena Dr. (1) Faxel, Miriam (1) Freimuth, Jonas (1) Gerhardt, Holger Prof. Dr. (1) Ghanbari, Mahsa Dr. (1) Gil, Marine (1) Graf, Robin Dr. (1) Harabula, Izabela-Cezara (1) Haucke, Volker Professor (1) Herzog, Margareta (1) Hinz, Michael Dr. (2) Hirsekorn, Antje (4) Höpken, Uta Elisabeth PD Dr. (2) Hübner, Norbert Prof. Dr. (1) Irastorza Azcarate, Ibai Dr. (1) Janz, Martin Dr. (3) Junker, Jan Philipp Prof. Dr. (1) Keller, Lisa (1) Kempa, Stefan Dr. (2) Kirchner, Marieluise Dr. (1) Kocks, Christine Dr. (2) Kolesnichenko, Marina Dr. (3) Kühn, Ralf Dr. (1) Kukalev, Alexander Dr. (2) Lacadie, Scott Allen Dr. (3) Landthaler, Markus Prof. Dr. (6) Lohse, Martin Prof. Dr. (1) Lusatis, Simone (1) Marg, Andreas Dr. (1) Mastrobuoni, Guido Dr. (1) Mathas, Stephan Dr. (3) Meijer, Mandy Dr. (1) Merks, Anne Margarete Dr. (1) Mertins, Philipp Dr. (1) Monti, Remo (1) Müller, Thomas Dr. (1) Müthel, Stefanie (3) Ofenbauer, Andreas Dr. (1) Ohler, Uwe Prof. Dr. (10) Oliveras Martinez, Anna Dr. (1) Panakova, Daniela Dr. (1) Patarcic, Inga Dr. (1) Patone, Giannino Dr. (1) Pombo, Ana Prof. Dr. (3) Popp, Oliver Dr. (1) Preibisch, Stephan Dr. (1) Prigione, Alessandro Prof. Dr. (1) Quedenau, Claudia (1) Rajewsky, Klaus Prof. Dr. (2) Rajewsky, Nikolaus Prof. Dr. (9) Rathgeber, Anja (1) Rehm, Armin Dr. (1) Roske, Yvette Dr. (1) Rudolph, Ina-Maria Dr. (1) Rybak-Wolf, Agnieszka Dr. (1) Scheidereit, Claus Prof. Dr. (4) Schmidt-Ullrich, Ruth Dr. (1) Schmitt, Clemens Prof. Dr. (1) Selbach, Matthias Prof. Dr. (5) Serebreni, Leonid Dr. (1) Siffrin, Volker (1) Spuler, Simone Prof. (2) Szabo, Dominik (1) Thieme, Christoph Dr. (1) Tursun, Baris Dr. (4) Uyar, Bora Dr. (15) Vucicevic, Dubravka (2) Willimsky, Gerald Dr. (1) Willnow, Thomas Prof. Dr. (1) Winick-Ng, Warren Dr. (1) Woehler, Andrew Dr. (4) Wurmus, Ricardo (10) Wyler, Emanuel Dr. (5) Zampieri, Niccolo Dr. (1) Zauber, Henrik Dr. (1) Zea Redondo, Luna (1) Zinzen, Robert Patrick Dr. (1) (-) Franke, Vedran Dr. (23) 2015 (1) 2017 (2) 2018 (2) 2019 (4) 2020 (1) 2021 (6) 2022 (4) 2023 (4) Advanced Light Microscopy (3) Anchored Signalling (3) Angiogenesis & Metabolism Laboratory (1) Animal Phenotyping (1) Biobank (10) (-) Bioinformatics and Omics Data Science (24) Biology of Malignant Lymphomas (3) Cancer Genetics and Cellular Stress Responses (3) Cardiac MRI (1) Cellular Neurosciences (2) Computational Regulatory Genomics (1) Developmental Biology / Signal Transduction (3) Developmental Neurobiology (2) Epigenetic Regulation and Chromatin Architecture (2) Experimental Ultrahigh-Field MR (4) Genetics and Genomics of Cardiovascular Diseases (4) Genomics (1) Host-microbiome factors in cardiovascular disease (2) Immune Regulation and Cancer (1) Integrative Vascular Biology (11) Intracellular Proteolysis (5) Magnetic Resonance (4) Mathematical Cell Physiology (1) Mathematical Modelling of Cellular Processes (3) Microenvironmental Regulation in Autoimmunity and Cancer (7) Molecular Biology of Peptide Hormones (1) Molecular Cardiovascular Research (2) Molecular Epidemiology (10) Molecular Pathways in Cortical Development (1) Molecular Physiology of Somatic Sensation (1) Myology (4) Nephrology and Inflammatory Vascular Diseases (2) Neuroimmunology Laboratory (1) Non-coding RNAs and Mechanisms of Cytoplasmic Gene Regulation (6) Organoids (1) Protein Production and Characterization (2) Proteome Dynamics (12) Proteomics (17) Proteomics and Molecular Mechanisms of Neurodegenerative Diseases (5) Psychoneuroimmunology (1) RNA Biology and Posttranscriptional Regulation (6) Structural Biology of Membrane-Associated Processes (6) Synaptic Transmission and Plasticity (1) Systems Biology Imaging (2) Systems Biology of Gene Regulatory Elements (7) Translational Approaches in Heart Failure and Cardiometabolic Disease (1) Translational Bioinformatics (2) Translational Cardiology and Functional Genomics (1) Translational Oncology of Solid Tumors (6) Translational Tumorimmunology (3) Tumor heterogeneity and treatment resistance in pediatric cancer (1) 24 Results: Active Filter: Franke, Vedran Dr.Bioinformatics and Omics Data Science Sort: Result score Newest to oldest Oldest to newest March 24, 2021 / bioRxiv Herpesviral induction of germline transcription factor DUX4 is critical for viral gene expression S. Walter V. Franke N. Drayman E. Wyler S. Tay M. Landthaler A. Akalin A. Ensser F. Full October 19, 2021 / Nat Commun PHF3 regulates neuronal gene expression through the Pol II CTD reader domain SPOC L.M. Appel V. Franke M. Bruno I. Grishkovskaya A. Kasiliauskaite T. Kaufmann U.E. Schoeberl M.G. Puchinger S. Kostrhon C. Ebenwaldner M. Sebesta E. Beltzung K. Mechtler G. Lin A. Vlasova M. Leeb R. Pavri A. Stark A. Akalin R. Stefl C. Bernecky K. Djinovic-Carugo D. Slade October 26, 2021 / Cell Rep Lymphocyte access to lymphoma is impaired by high endothelial venule regression L. Menzel M. Zschummel T. Crowley V. Franke M. Grau C. Ulbricht A. Hauser V. Siffrin M. Bajénoff S.E. Acton A. Akalin G. Lenz G. Willimsky U.E. Höpken A. Rehm November 25, 2021 / Nature Cell-type specialization is encoded by specific chromatin topologies W. Winick-Ng A. Kukalev I. Harabula L. Zea-Redondo D. Szabó M. Meijer L. Serebreni Y. Zhang S. Bianco A.M. Chiariello I. Irastorza-Azcarate C.J. Thieme T.M. Sparks S. Carvalho L. Fiorillo F. Musella E. Irani E.T. Triglia A.A. Kolodziejczyk A. Abentung G. Apostolova E.J. Paul V. Franke R. Kempfer A. Akalin S.A. Teichmann G. Dechant M.A. Ungless M. Nicodemi L. Welch G. Castelo-Branco A. Pombo December 06, 2021 / Genome Biol The SEQC2 epigenomics quality control (EpiQC) study J. Foox J. Nordlund C. Lalancette T. Gong M. Lacey S. Lent B.W. Langhorst V.K.C. Ponnaluri L. Williams K.R. Padmanabhan R. Cavalcante A. Lundmark D. Butler C. Mozsary J. Gurvitch J.M. Greally M. Suzuki M. Menor M. Nasu A. Alonso C. Sheridan A. Scherer S. Bruinsma G. Golda A. Muszynska P.P. Łabaj M.A. Campbell F. Wos A. Raine U. Liljedahl T. Axelsson C. Wang Z. Chen Z. Yang J. Li X. Yang H. Wang A. Melnick S. Guo A. Blume V. Franke I. Ibanez de Caceres C. Rodriguez-Antolin R. Rosas J.W. Davis J. Ishii D.B. Megherbi W. Xiao W. Liao J. Xu H. Hong B. Ning W. Tong A. Akalin Y. Wang Y. Deng C.E. Mason March 19, 2021 / iScience Transcriptomic profiling of SARS-CoV-2 infected human cell lines identifies HSP90 as target for COVID-19 therapy E. Wyler K. Mösbauer V. Franke A. Diag L.T. Gottula R. Arsiè F. Klironomos D. Koppstein K. Hönzke S. Ayoub C. Buccitelli K. Hoffmann A. Richter I. Legnini A. Ivanov T. Mari S. Del Giudice J. Papies S. Praktiknjo T.F. Meyer M.A. Müller D. Niemeyer A. Hocke M. Selbach A. Akalin N. Rajewsky C. Drosten M. Landthaler April 01, 2015 / Bioinformatics genomation: a toolkit to summarize, annotate and visualize genomic intervals A. Akalin V. Franke K. Vlahoviček C.E. Mason D. Schübeler December 14, 2018 / EMBO J The IκB kinase complex is a regulator of mRNA stability N. Mikuda M. Kolesnichenko P. Beaudette O. Popp B. Uyar W. Sun A.B. Tufan B. Perder A. Akalin W. Chen P. Mertins G. Dittmar M. Hinz C. Scheidereit March 18, 2019 / Nucleic Acids Res Alternative 3' UTRs direct localization of functionally diverse protein isoforms in neuronal compartments C. Ciolli Mattioli A. Rom V. Franke K. Imami G. Arrey M. Terne A. Woehler A. Akalin I. Ulitsky M. Chekulaeva March 28, 2019 / Blood Autocrine LTA signaling drives NF-κB and JAK-STAT activity and myeloid gene expression in Hodgkin lymphoma L. von Hoff E. Kärgel V. Franke E. McShane K.W. Schulz-Beiss G. Patone N. Schleussner M. Kolesnichenko N. Hübner O. Daumke M. Selbach A. Akalin S. Mathas C. Scheidereit Pagination Current page 1 Page 2 Page 3 Next page Next › Last page Last »
March 24, 2021 / bioRxiv Herpesviral induction of germline transcription factor DUX4 is critical for viral gene expression S. Walter V. Franke N. Drayman E. Wyler S. Tay M. Landthaler A. Akalin A. Ensser F. Full
October 19, 2021 / Nat Commun PHF3 regulates neuronal gene expression through the Pol II CTD reader domain SPOC L.M. Appel V. Franke M. Bruno I. Grishkovskaya A. Kasiliauskaite T. Kaufmann U.E. Schoeberl M.G. Puchinger S. Kostrhon C. Ebenwaldner M. Sebesta E. Beltzung K. Mechtler G. Lin A. Vlasova M. Leeb R. Pavri A. Stark A. Akalin R. Stefl C. Bernecky K. Djinovic-Carugo D. Slade
October 26, 2021 / Cell Rep Lymphocyte access to lymphoma is impaired by high endothelial venule regression L. Menzel M. Zschummel T. Crowley V. Franke M. Grau C. Ulbricht A. Hauser V. Siffrin M. Bajénoff S.E. Acton A. Akalin G. Lenz G. Willimsky U.E. Höpken A. Rehm
November 25, 2021 / Nature Cell-type specialization is encoded by specific chromatin topologies W. Winick-Ng A. Kukalev I. Harabula L. Zea-Redondo D. Szabó M. Meijer L. Serebreni Y. Zhang S. Bianco A.M. Chiariello I. Irastorza-Azcarate C.J. Thieme T.M. Sparks S. Carvalho L. Fiorillo F. Musella E. Irani E.T. Triglia A.A. Kolodziejczyk A. Abentung G. Apostolova E.J. Paul V. Franke R. Kempfer A. Akalin S.A. Teichmann G. Dechant M.A. Ungless M. Nicodemi L. Welch G. Castelo-Branco A. Pombo
December 06, 2021 / Genome Biol The SEQC2 epigenomics quality control (EpiQC) study J. Foox J. Nordlund C. Lalancette T. Gong M. Lacey S. Lent B.W. Langhorst V.K.C. Ponnaluri L. Williams K.R. Padmanabhan R. Cavalcante A. Lundmark D. Butler C. Mozsary J. Gurvitch J.M. Greally M. Suzuki M. Menor M. Nasu A. Alonso C. Sheridan A. Scherer S. Bruinsma G. Golda A. Muszynska P.P. Łabaj M.A. Campbell F. Wos A. Raine U. Liljedahl T. Axelsson C. Wang Z. Chen Z. Yang J. Li X. Yang H. Wang A. Melnick S. Guo A. Blume V. Franke I. Ibanez de Caceres C. Rodriguez-Antolin R. Rosas J.W. Davis J. Ishii D.B. Megherbi W. Xiao W. Liao J. Xu H. Hong B. Ning W. Tong A. Akalin Y. Wang Y. Deng C.E. Mason
March 19, 2021 / iScience Transcriptomic profiling of SARS-CoV-2 infected human cell lines identifies HSP90 as target for COVID-19 therapy E. Wyler K. Mösbauer V. Franke A. Diag L.T. Gottula R. Arsiè F. Klironomos D. Koppstein K. Hönzke S. Ayoub C. Buccitelli K. Hoffmann A. Richter I. Legnini A. Ivanov T. Mari S. Del Giudice J. Papies S. Praktiknjo T.F. Meyer M.A. Müller D. Niemeyer A. Hocke M. Selbach A. Akalin N. Rajewsky C. Drosten M. Landthaler
April 01, 2015 / Bioinformatics genomation: a toolkit to summarize, annotate and visualize genomic intervals A. Akalin V. Franke K. Vlahoviček C.E. Mason D. Schübeler
December 14, 2018 / EMBO J The IκB kinase complex is a regulator of mRNA stability N. Mikuda M. Kolesnichenko P. Beaudette O. Popp B. Uyar W. Sun A.B. Tufan B. Perder A. Akalin W. Chen P. Mertins G. Dittmar M. Hinz C. Scheidereit
March 18, 2019 / Nucleic Acids Res Alternative 3' UTRs direct localization of functionally diverse protein isoforms in neuronal compartments C. Ciolli Mattioli A. Rom V. Franke K. Imami G. Arrey M. Terne A. Woehler A. Akalin I. Ulitsky M. Chekulaeva
March 28, 2019 / Blood Autocrine LTA signaling drives NF-κB and JAK-STAT activity and myeloid gene expression in Hodgkin lymphoma L. von Hoff E. Kärgel V. Franke E. McShane K.W. Schulz-Beiss G. Patone N. Schleussner M. Kolesnichenko N. Hübner O. Daumke M. Selbach A. Akalin S. Mathas C. Scheidereit