Scientific Publications Search Search Author Impact Factor Release Date Research Group Search Sort by RelevanceFrom A-ZAuthored onDate/Time RangeRelease date Order AscDesc Adami, Eleonora Dr. (1) Akalin, Altuna Dr. (9) Birchmeier-Kohler, Carmen Prof. Dr. (1) Blachut, Susanne (1) Burkert, Christian Martin (1) Chekulaeva, Marina Dr. (1) Chen, Chia-Yu (1) Diecke, Sebastian Dr. (2) Ghanbari, Mahsa Dr. (5) Gil, Marine (1) Gotthardt, Michael Prof. Dr. (2) Henssen, Anton Prof. Dr. med. (1) Hübner, Norbert Prof. Dr. (2) Hummel, Oliver (1) Junker, Jan Philipp Prof. Dr. (2) Kaufmann, Tom (1) Kempa, Stefan Dr. (1) Kirchner, Marieluise Dr. (1) Lacadie, Scott Allen Dr. (10) Landthaler, Markus Prof. Dr. (10) Lindberg, Eric Lars-Helge (1) Maatz, Henrike Dr. (1) Mastrobuoni, Guido Dr. (1) Merks, Anne Margarete Dr. (1) Mertins, Philipp Dr. (1) Mintcheva, Janita (1) Monti, Remo (3) Müller, Thomas Dr. (1) Müthel, Stefanie (1) Neuschulz, Anika (1) Obermayer-Wasserscheid, Benedikt Dr. (3) Ofenbauer, Andreas Dr. (1) Ohler, Uwe Prof. Dr. (139) Panakova, Daniela Dr. (1) Patone, Giannino Dr. (1) Pombo, Ana Prof. Dr. (1) Preibisch, Stephan Dr. (1) Rajewsky, Nikolaus Prof. Dr. (5) Rautenstrauch, Pia Josefine (3) Röefzaad, Claudia (1) Ruiz Orera, Jorge Dr. (1) Sander, Maike Prof. Dr. (1) Schwarz, Roland Dr. (2) Selbach, Matthias Prof. Dr. (9) Sprink, Thiemo Dr. (1) Streck, Adam Dr. (1) Tursun, Baris Dr. (2) Uyar, Bora Dr. (2) Villamil, Gabriel (1) Vucicevic, Dubravka (3) Woehler, Andrew Dr. (1) Wurmus, Ricardo (3) Wyler, Emanuel Dr. (3) Zauber, Henrik Dr. (2) Zinzen, Robert Patrick Dr. (3) (-) Beule, Dieter Dr. (2) (-) Franke, Vedran Dr. (1) (-) Hirsekorn, Antje (12) 2015 (1) 2016 (2) 2017 (3) 2018 (2) 2019 (2) 2020 (2) 2021 (2) 2022 (1) Advanced Light Microscopy (2) AG Müller/Dechend (ECRC) (4) AG Schreiber [ECRC] (1) Animal Phenotyping (3) Bioinformatics and Omics Data Science (28) Biology of Malignant Lymphomas (16) Biomedical Image Analysis (1) Cancer Genetics and Cellular Stress Responses (2) Cellular Neurosciences (3) Clinic of Psychiatry / Modul Psychiatry of Aging (1) (-) Computational Regulatory Genomics (15) Developmental Biology / Signal Transduction (3) Developmental Neurobiology (1) Electron Microscopy (2) Endocrinology, Diabetes and Nutritional Medicine (1) Epigenetic Modifications in Neuroblastoma (3) Epigenetic Regulation and Chromatin Architecture (4) Experimental Ultrahigh-Field MR (1) Flow Cytometry (1) Genetics and Genomics of Cardiovascular Diseases (4) Genetics of Congenital Heart Disease (4) Genomics (6) Host-microbiome factors in cardiovascular disease (1) Hypertension-caused End-Organ Damage (4) Hypertension-Mediated End-Organ Damage (4) Immune Dysregulations in Oncology (3) Immune Regulation and Cancer (4) In Situ Structural Biology (1) Integrative Vascular Biology (1) Intracellular Proteolysis (1) Magnetic Resonance (1) Mathematical Modelling of Cellular Processes (5) Mechanism-based Cancer Therapies (10) Microenvironmental Regulation in Autoimmunity and Cancer (7) Mobile DNA (3) Molecular Biology of Peptide Hormones (3) Molecular Cardiovascular Research (1) Molecular Genetics of Chronic Inflammation and Allergic Disease (1) Molecular Immunology and Gene Therapy (22) Myology (1) Nephrology and Inflammatory Vascular Diseases (3) Neuroimmunology Laboratory (1) Non-coding RNAs and Mechanisms of Cytoplasmic Gene Regulation (4) Organoids (1) Out-patient Clinic for Neuroimmunology (1) Out-patient Clinic for Pediatric Allergology and Atopic Dermatitis (1) Pluripotent Stem Cells (1) Protein Production and Characterization (1) Proteome Dynamics (7) Proteomics (6) Proteomics and Metabolomics (2) Proteomics and Molecular Mechanisms of Neurodegenerative Diseases (3) Psychoneuroimmunology (3) Quantitative Developmental Biology (1) RNA Biology and Posttranscriptional Regulation (12) Structural Biology of Membrane-Associated Processes (7) Systems Biology Imaging (2) Systems Biology of Gene Regulatory Elements (5) Systems Hematology, Stem Cells & Precision Medicine (1) Translational Bioinformatics (89) Translational Oncology of Solid Tumors (4) Translational Organ Models (2) Translational Tumorimmunology (3) Tumor heterogeneity and treatment resistance in pediatric cancer (1) 15 Results: Active Filter: Beule, Dieter Dr.Franke, Vedran Dr.Hirsekorn, AntjeComputational Regulatory Genomics Sort: Result score Newest to oldest Oldest to newest September 15, 2015 / BMC Evol Biol Ancient gene duplications have shaped developmental stage-specific expression in Pristionchus pacificus P. Baskaran C. Roedelsperger N. Prabh V. Serobyan G.V. Markov A. Hirsekorn C. Dieterich February 21, 2019 / Genome Biol Reproducible inference of transcription factor footprints in ATAC-seq and DNase-seq datasets using protocol-specific bias modeling A. Karabacak Calviello A. Hirsekorn R. Wurmus D. Yusuf U. Ohler April 09, 2019 / Nat Commun Global identification of functional microRNA-mRNA interactions in Drosophila H.H. Wessels S. Lebedeva A. Hirsekorn R. Wurmus A. Akalin N. Mukherjee U. Ohler January 01, 2017 / Nat Struct Mol Biol Integrative classification of human coding and noncoding genes through RNA metabolism profiles N. Mukherjee L. Calviello A. Hirsekorn S. de Pretis M. Pelizzola U. Ohler February 02, 2017 / Cell Stem Cell A multi-step transcriptional and chromatin state cascade underlies motor neuron programming from embryonic stem cells S. Velasco M.M. Ibrahim A. Kakumanu G. Garipler B. Aydin M.A. Al-Sayegh A. Hirsekorn F. Abdul-Rahman R. Satija U. Ohler S. Mahony E.O. Mazzoni January 13, 2022 / Cell Genom Single-cell-resolved dynamics of chromatin architecture delineate cell and regulatory states in zebrafish embryos A.C. McGarvey W. Kopp D. Vučićević K. Mattonet R. Kempfer A. Hirsekorn I. Bilić M. Gil A. Trinks A.M. Merks D. Panáková A. Pombo A. Akalin J.P. Junker D.Y.R. Stainier D. Garfield U. Ohler S.A. Lacadie January 01, 2020 / Nat Genet Extrachromosomal circular DNA drives oncogenic genome remodeling in neuroblastoma R.P. Koche E. Rodriguez-Fos K. Helmsauer M. Burkert I.C. MacArthur J. Maag R. Chamorro N. Munoz-Perez M. Puiggròs H. Dorado Garcia Y. Bei C. Röefzaad V. Bardinet A. Szymansky A. Winkler T. Thole N. Timme K. Kasack S. Fuchs F. Klironomos N. Thiessen E. Blanc K. Schmelz A. Künkele P. Hundsdörfer C. Rosswog J. Theissen D. Beule H. Deubzer S. Sauer J. Toedling M. Fischer F. Hertwig R.F. Schwarz A. Eggert D. Torrents J.H. Schulte A.G. Henssen August 01, 2021 / RNA RNA-binding proteins regulate aldosterone homeostasis in human steroidogenic cells R. Fu K. Wellman A. Baldwin J. Rege K. Walters A. Hirsekorn K. Riemondy W.E Rainey N. Mukherjee August 01, 2020 / Nat Struct Mol Biol Quantification of translation uncovers the functions of the alternative transcriptome L. Calviello A. Hirsekorn U. Ohler October 26, 2018 / Nat Commun Determinants of promoter and enhancer transcription directionality in metazoans M.M. Ibrahim A. Karabacak A. Glahs E. Kolundzic A. Hirsekorn A. Carda B. Tursun R.P. Zinzen S.A. Lacadie U. Ohler Pagination Current page 1 Page 2 Next page Next › Last page Last »
September 15, 2015 / BMC Evol Biol Ancient gene duplications have shaped developmental stage-specific expression in Pristionchus pacificus P. Baskaran C. Roedelsperger N. Prabh V. Serobyan G.V. Markov A. Hirsekorn C. Dieterich
February 21, 2019 / Genome Biol Reproducible inference of transcription factor footprints in ATAC-seq and DNase-seq datasets using protocol-specific bias modeling A. Karabacak Calviello A. Hirsekorn R. Wurmus D. Yusuf U. Ohler
April 09, 2019 / Nat Commun Global identification of functional microRNA-mRNA interactions in Drosophila H.H. Wessels S. Lebedeva A. Hirsekorn R. Wurmus A. Akalin N. Mukherjee U. Ohler
January 01, 2017 / Nat Struct Mol Biol Integrative classification of human coding and noncoding genes through RNA metabolism profiles N. Mukherjee L. Calviello A. Hirsekorn S. de Pretis M. Pelizzola U. Ohler
February 02, 2017 / Cell Stem Cell A multi-step transcriptional and chromatin state cascade underlies motor neuron programming from embryonic stem cells S. Velasco M.M. Ibrahim A. Kakumanu G. Garipler B. Aydin M.A. Al-Sayegh A. Hirsekorn F. Abdul-Rahman R. Satija U. Ohler S. Mahony E.O. Mazzoni
January 13, 2022 / Cell Genom Single-cell-resolved dynamics of chromatin architecture delineate cell and regulatory states in zebrafish embryos A.C. McGarvey W. Kopp D. Vučićević K. Mattonet R. Kempfer A. Hirsekorn I. Bilić M. Gil A. Trinks A.M. Merks D. Panáková A. Pombo A. Akalin J.P. Junker D.Y.R. Stainier D. Garfield U. Ohler S.A. Lacadie
January 01, 2020 / Nat Genet Extrachromosomal circular DNA drives oncogenic genome remodeling in neuroblastoma R.P. Koche E. Rodriguez-Fos K. Helmsauer M. Burkert I.C. MacArthur J. Maag R. Chamorro N. Munoz-Perez M. Puiggròs H. Dorado Garcia Y. Bei C. Röefzaad V. Bardinet A. Szymansky A. Winkler T. Thole N. Timme K. Kasack S. Fuchs F. Klironomos N. Thiessen E. Blanc K. Schmelz A. Künkele P. Hundsdörfer C. Rosswog J. Theissen D. Beule H. Deubzer S. Sauer J. Toedling M. Fischer F. Hertwig R.F. Schwarz A. Eggert D. Torrents J.H. Schulte A.G. Henssen
August 01, 2021 / RNA RNA-binding proteins regulate aldosterone homeostasis in human steroidogenic cells R. Fu K. Wellman A. Baldwin J. Rege K. Walters A. Hirsekorn K. Riemondy W.E Rainey N. Mukherjee
August 01, 2020 / Nat Struct Mol Biol Quantification of translation uncovers the functions of the alternative transcriptome L. Calviello A. Hirsekorn U. Ohler
October 26, 2018 / Nat Commun Determinants of promoter and enhancer transcription directionality in metazoans M.M. Ibrahim A. Karabacak A. Glahs E. Kolundzic A. Hirsekorn A. Carda B. Tursun R.P. Zinzen S.A. Lacadie U. Ohler