Scientific Publications Search Search Author Release Date Research Group Search Sort by RelevanceFrom A-ZAuthored onDate/Time RangeRelease date Order AscDesc Adami, Eleonora Dr. (4) Akalin, Altuna Dr. (6) Alenina, Natalia Dr. (10) Altmueller, Janine Dr.med. (32) Annibale, Paolo Dr. (2) Bader, Michael Prof. Dr. (19) Bähring, Sylvia Dr. (1) Bartolomaeus, Hendrik (1) Begay-Müller, Valerie Dr. (5) Beule, Dieter Dr. (4) Birchmeier, Walter Prof. Dr. (2) Birchmeier-Kohler, Carmen Prof. Dr. (12) Blachut, Susanne (1) Blankenstein, Thomas Prof. Dr. (6) Blume, Alexander Dr. (1) Blüthgen, Nils (2) Borodina, Tatiana Dr. (1) Bunina, Daria Dr. (1) Bunse, Mario Dr. (1) Cano Rincon, Elena Dr. (2) Castilho de Barros, Carlos Prof. Dr. (1) Cerda Esteban, Nuria Dr. (1) Cerda Jara, Cledi Alicia (1) Chekulaeva, Marina Dr. (3) Chen, Wei Prof. Dr. (8) Chu, Van Trung Dr. (1) Dahlmann, Mathias Dr. (2) Daniel, Peter Prof. Dr. (2) Daumke, Oliver Prof. Dr. (6) Dechend, Ralf Priv. Doz. (16) de la Rosa, Kathrin Prof. Dr. (1) Diecke, Sebastian Dr. (3) Di Virgilio, Michela Prof. Dr. (2) Dräger, Alexander (1) Escobar Fernandez, Helena Dr. (1) Estebanez, Luc Dr. (2) Falcke, Martin Prof. Dr. (3) Feinkohl, Insa Prof. Dr. (3) Fielitz, Jens Dr. (4) Filosa, Alessandro Dr. (1) Fischer, Cornelius Dr. (1) Forslund, Sofia Dr. (6) Gerhardt, Holger Prof. Dr. (8) Gladytz, Thomas (3) Gorski, Stan Dr. (1) Gösele, Claudia Dr. (1) Gotthardt, Michael Prof. Dr. (2) Gouti, Mina Dr. (1) Graf, Robin Dr. (1) Grobe, Jenny (1) Grosswendt, Stefanie Dr. (2) Haas, Simon Dr. rer. nat. (5) Haase, Nadine Dr. (3) Haghverdi, Laleh Dr. (1) Harabula, Izabela-Cezara (1) Haseleu, Julia Dr. (1) Haucke, Volker Professor (3) Heinemann, Udo Prof. Dr. (5) Henssen, Anton Prof. Dr. med. (3) Herse, Florian PD Dr. (8) Heuser, Arnd Dr. (1) Hinze, Christian Dr. med. Dipl.-Math. (2) Hirsekorn, Antje (2) Hodge, Russell (3) Hofstätter, Maria (1) Hollfinger, Irene (1) Höpken, Uta Elisabeth PD Dr. (2) Hübner, Norbert Prof. Dr. (13) Hummel, Oliver (2) Infante Duarte, Carmen (4) Ivics, Zoltan Dr. (11) Izsvak, Zsuzsanna Dr. (16) Janke, Jürgen Dr. (2) Janz, Martin Dr. (3) Jentsch, Thomas Prof. Dr. (3) Jouhanneau, Jean-Sebastien Dr. (1) Junker, Jan Philipp Prof. Dr. (4) Jüttner, Rene Dr. (1) Kabrani, Eleni Dr. (1) Kainmüller, Dagmar Prof. Dr. (3) Kaminski, Michael Dr. (2) Kammertöns, Thomas Dr. (1) Kastelic, Nicolai (1) Kempa, Stefan Dr. (8) Kettenmann, Helmut Prof. Dr. (8) Kettritz, Ralph Prof. Dr. (7) Kirchner, Marieluise Dr. (1) Klaassen, Sabine Prof. Dr. med. (1) Klußmann, Enno PD Dr. (3) Knoll, Rebecca Luise Dr. med. (1) Kobelt, Dennis Dr. (2) Kocks, Christine Dr. (4) Kofahl, Bente Dr. (1) Kowenz-Leutz, Elisabeth Dr. (2) Ku, Min-Chi Dr. (3) Kudryashev, Mikhail Prof. Dr. (5) Kühn, Ralf Dr. (7) Kukalev, Alexander Dr. (1) Kunz, Severine Dr. (3) Lahmann, Ines Dr. (1) Landthaler, Markus Prof. Dr. (8) Lee, Young-Ae Prof. Dr. (4) Leisegang, Matthias Prof. Dr. rer. nat. (2) Leutz, Achim Prof. Dr. (3) Lewin, Gary Prof. Dr. (6) Lisowski, Pawel Dr. (4) Löber, Ulrike Dr. (1) Lohse, Martin Prof. Dr. (6) Lorenz, Felix Dr. (1) Ludwig, Leif S. Dr. med. Dr. rer. nat. (1) Luft, Friedrich Prof. Dr. (23) Lupianez Garcia, Dario Jesus Dr. (1) Maatz, Henrike Dr. (3) Mahmoodzadeh, Shokoufeh PD Dr. (2) Marenholz, Ingo Dr. (3) Marg, Andreas Dr. (1) Margineanu, Anca Dr. (1) Marko, Lajos Dr. (2) Markowski, Julia (1) Mastrobuoni, Guido Dr. (2) Mathas, Stephan Dr. (3) Mertins, Philipp Dr. (5) Metzger, Jakob Johannes Dr. (2) Meyer, Irmtraud Margret Prof. Dr. (1) Millward, Jason Dr. (3) Mittnenzweig, Markus Dr. (1) Morano, Ingo Prof. Dr. (2) Müller, Dominik Prof. Dr. (11) Müller, Gerd Dr. (1) Müller, Thomas Dr. (3) Müthel, Stefanie (1) Na, Il-Kang Dr. (1) Nazare, Marc (5) Nguyen, Tam Hoai Dr. (1) Niendorf, Thoralf Prof. Dr. (20) Nimptsch, Katharina Dr. (5) Noel, Jeffrey Dr. (2) Obermayer-Wasserscheid, Benedikt Dr. (1) Oertel, Frederike Cosima MD/PhD (5) Panakova, Daniela Dr. (2) Patone, Giannino Dr. (2) Paul, Friedemann Prof. Dr. med. (45) Perrot, Andreas (3) Pezzutto, Antonio Prof. Dr. (2) Piazza, Ilaria Dr. (1) Pischon, Tobias Prof. Dr. (19) Pombo, Ana Prof. Dr. (11) Popp, Oliver Dr. (1) Potente, Michael Prof. Dr. (4) Poulet, James Prof. Dr. (4) Prigione, Alessandro Prof. Dr. (3) Qadri, Fatimunnisa Dr. (2) Quedenau, Claudia (1) Radke, Michael Dr. (1) Rajewsky, Klaus Prof. Dr. (3) Rajewsky, Nikolaus Prof. Dr. (12) Rathjen, Fritz Prof. Dr. (2) Rehm, Armin Dr. (1) Robson, Michael Dr. (2) Rocks, Oliver Dr. (1) Rousselle, Anthony (2) Roßius, Jana (1) Rybak-Wolf, Agnieszka Dr. (1) Saar, Kathrin Dr. (1) Sander, Maike Prof. Dr. (3) Sanders, Ashley Dr. (2) Sattentau, Quentin James Prof. Dr. (3) Sawamiphak, Suphansa Dr. (1) Scheidereit, Claus Prof. Dr. (1) Schiattarella, Gabriele G. Dr. (6) Schlag, Peter M. Prof. Dr. (1) Schmidt, Sabine (1) Schmidt-Krüger, Vanessa Dr. (1) Schmidt-Ullrich, Ruth Dr. (2) Schmitt, Clemens Prof. Dr. (6) Schreiber, Adrian PD Dr. med. (3) Schulz-Menger, Jeanette Prof. Dr. (15) Schütz, Anja Dr. (3) Schwarz, Roland Dr. (3) Schwedhelm, Carolina Dr. (1) Selbach, Matthias Prof. Dr. (6) Semtner, Marcus Dr. (3) Siffrin, Volker (3) Sigal, Michael Dr. (1) Simon, Katja Prof. Dr. (6) Smith, Janice (2) Spagnoli, Francesca Dr. (1) Specker, Edgar Dr. (4) Sperling, Silke Prof. Dr. (1) Sporbert, Anje Dr. (1) Spuler, Simone Prof. (3) Starke, Ludger Benedikt (1) Stein, Ulrike Prof. Dr. (7) Steinfelder, Svenja Dr. (5) Sugimoto, Yoichiro Dr. (2) Tano, Jean-Yves Dr. (1) Todiras, Mihail (2) Tursun, Baris Dr. (2) Uckert, Wolfgang Prof. Dr. (4) Uyar, Bora Dr. (2) von Kries, Jens Peter Dr. (9) Waiczies, Sonia PD Dr. (3) Wallukat, Gerd Dr. (3) Walther, Wolfgang Prof. Dr. (7) Wanker, Erich Prof. Dr. (6) Wilck, Nicola Dr. med. (3) Willimsky, Gerald Dr. (2) Willnow, Thomas Prof. Dr. (4) Winick-Ng, Warren Dr. (1) Winter, Lukas Dr. (4) Wisinski-Bokiniec, Phillip Dr. (1) Woehler, Andrew Dr. (3) Wolf, Jana Prof. Dr. (2) Wolf, Susanne Dr. (7) Wurmus, Ricardo (1) Wyler, Emanuel Dr. (5) Zampieri, Niccolo Dr. (1) Zauber, Henrik Dr. (1) Zinzen, Robert Patrick Dr. (3) Zywitza, Vera Dr. (1) (-) Franke, Vedran Dr. (2) (-) Fritsche, Raphaela Dr. (1) (-) Ohler, Uwe Prof. Dr. (12) 1999 (2) 2000 (3) 2001 (2) 2002 (1) 2004 (2) 2005 (1) 2006 (6) 2007 (5) 2008 (1) 2009 (4) 2010 (11) 2011 (7) 2012 (10) 2013 (8) 2014 (6) 2015 (7) 2016 (8) (-) 2017 (14) 2018 (9) 2019 (16) 2020 (11) 2022 (22) 2023 (13) 2024 (12) Bioinformatics and Omics Data Science (4) Computational Regulatory Genomics (12) Developmental Biology / Signal Transduction (1) Epigenetic Regulation and Chromatin Architecture (1) Non-coding RNAs and Mechanisms of Cytoplasmic Gene Regulation (1) Proteome Dynamics (2) RNA Biology and Posttranscriptional Regulation (4) Systems Biology Imaging (1) Systems Biology of Gene Regulatory Elements (4) 14 Results: Active Filter: Franke, Vedran Dr.Fritsche, Raphaela Dr.Ohler, Uwe Prof. Dr.2017 Sort: Result score Newest to oldest Oldest to newest October, 2017 / Trends Genet Beyond read-counts: Ribo-seq data analysis to understand the functions of the transcriptome L. Calviello U. Ohler September 19, 2017 / Nat Commun RNA localization is a key determinant of neurite-enriched proteome A. Zappulo D. van den Bruck C. Ciolli Mattioli V. Franke K. Imami E. McShane M. Moreno-Estelles L. Calviello A. Filipchyk E. Peguero-Sanchez T. Müller A. Woehler C. Birchmeier E. Merino N. Rajewsky U. Ohler E.O. Mazzoni M. Selbach A. Akalin M. Chekulaeva November 02, 2017 / Nucleic Acids Res ssHMM: extracting intuitive sequence-structure motifs from high-throughput RNA-binding protein data D. Heller R. Krestel U. Ohler M. Vingron A. Marsico October 26, 2017 / Genome Biol McEnhancer: predicting gene expression via semi-supervised assignment of enhancers to target genes D. Hafez A. Karabacak S. Krueger Y.C. Hwang L.S. Wang R.P. Zinzen U. Ohler October 31, 2017 / Genome Biol Widespread activation of antisense transcription of the host genome during herpes simplex virus 1 infection E. Wyler J. Menegatti V. Franke C. Kocks A. Boltengagen T. Hennig K. Theil A. Rutkowski C. Ferrai L. Baer L. Kermas C. Friedel N. Rajewsky A. Akalin L. Dölken F. Grässer M. Landthaler June 02, 2017 / Nucleic Acids Res RCAS: an RNA centric annotation system for transcriptome-wide regions of interest B. Uyar D. Yusuf R. Wurmus N. Rajewsky U. Ohler A. Akalin July 03, 2017 / Nucleic Acids Res The RNA workbench: best practices for RNA and high-throughput sequencing bioinformatics in Galaxy B.A. Grüning J. Fallmann D. Yusuf S. Will A. Erxleben F. Eggenhofer T. Houwaart B. Batut P. Videm A. Bagnacani M. Wolfien S.C. Lott Y. Hoogstrate W.R. Hess O. Wolkenhauer S. Hoffmann A. Akalin U. Ohler P.F. Stadler R. Backofen November 10, 2017 / J Biotechnol RNA-bioinformatics: tools, services and databases for the analysis of RNA-based regulation R. Backofen J. Engelhardt A. Erxleben J. Fallmann B. Grüning U. Ohler N. Rajewsky P.F. Stadler August, 2017 / Genome Res DDX54 regulates transcriptome dynamics during DNA damage response M. Milek K. Imami N. Mukherjee F. De Bortoli U. Zinnall O. Hazapis C. Trahan M. Oeffinger F. Heyd U. Ohler M. Selbach M. Landthaler January 03, 2017 / BMC Bioinformatics JACUSA: site-specific identification of RNA editing events from replicate sequencing data M. Piechotta E. Wyler U. Ohler M. Landthaler C. Dieterich Pagination Current page 1 Page 2 Next page Next › Last page Last »
October, 2017 / Trends Genet Beyond read-counts: Ribo-seq data analysis to understand the functions of the transcriptome L. Calviello U. Ohler
September 19, 2017 / Nat Commun RNA localization is a key determinant of neurite-enriched proteome A. Zappulo D. van den Bruck C. Ciolli Mattioli V. Franke K. Imami E. McShane M. Moreno-Estelles L. Calviello A. Filipchyk E. Peguero-Sanchez T. Müller A. Woehler C. Birchmeier E. Merino N. Rajewsky U. Ohler E.O. Mazzoni M. Selbach A. Akalin M. Chekulaeva
November 02, 2017 / Nucleic Acids Res ssHMM: extracting intuitive sequence-structure motifs from high-throughput RNA-binding protein data D. Heller R. Krestel U. Ohler M. Vingron A. Marsico
October 26, 2017 / Genome Biol McEnhancer: predicting gene expression via semi-supervised assignment of enhancers to target genes D. Hafez A. Karabacak S. Krueger Y.C. Hwang L.S. Wang R.P. Zinzen U. Ohler
October 31, 2017 / Genome Biol Widespread activation of antisense transcription of the host genome during herpes simplex virus 1 infection E. Wyler J. Menegatti V. Franke C. Kocks A. Boltengagen T. Hennig K. Theil A. Rutkowski C. Ferrai L. Baer L. Kermas C. Friedel N. Rajewsky A. Akalin L. Dölken F. Grässer M. Landthaler
June 02, 2017 / Nucleic Acids Res RCAS: an RNA centric annotation system for transcriptome-wide regions of interest B. Uyar D. Yusuf R. Wurmus N. Rajewsky U. Ohler A. Akalin
July 03, 2017 / Nucleic Acids Res The RNA workbench: best practices for RNA and high-throughput sequencing bioinformatics in Galaxy B.A. Grüning J. Fallmann D. Yusuf S. Will A. Erxleben F. Eggenhofer T. Houwaart B. Batut P. Videm A. Bagnacani M. Wolfien S.C. Lott Y. Hoogstrate W.R. Hess O. Wolkenhauer S. Hoffmann A. Akalin U. Ohler P.F. Stadler R. Backofen
November 10, 2017 / J Biotechnol RNA-bioinformatics: tools, services and databases for the analysis of RNA-based regulation R. Backofen J. Engelhardt A. Erxleben J. Fallmann B. Grüning U. Ohler N. Rajewsky P.F. Stadler
August, 2017 / Genome Res DDX54 regulates transcriptome dynamics during DNA damage response M. Milek K. Imami N. Mukherjee F. De Bortoli U. Zinnall O. Hazapis C. Trahan M. Oeffinger F. Heyd U. Ohler M. Selbach M. Landthaler
January 03, 2017 / BMC Bioinformatics JACUSA: site-specific identification of RNA editing events from replicate sequencing data M. Piechotta E. Wyler U. Ohler M. Landthaler C. Dieterich