Scientific Publications Search Search Author Impact Factor Release Date Research Group Search Sort by RelevanceFrom A-ZAuthored onDate/Time RangeRelease date Order AscDesc Akalin, Altuna Dr. (4) Beule, Dieter Dr. (1) Carvalho, Silvia Filipa (2) Diecke, Sebastian Dr. (1) Franke, Vedran Dr. (2) Gil, Marine (1) Gorski, Stan Dr. (1) Grosswendt, Stefanie Dr. (1) Harabula, Izabela-Cezara (4) Hirsekorn, Antje (1) Hübner, Norbert Prof. Dr. (1) Irastorza Azcarate, Ibai Dr. (5) Junker, Jan Philipp Prof. Dr. (1) Kettenmann, Helmut Prof. Dr. (1) Kocks, Christine Dr. (1) Krabbe, Grietje Dr. (1) Lacadie, Scott Allen Dr. (1) Landthaler, Markus Prof. Dr. (1) Lupianez Garcia, Dario Jesus Dr. (1) Markowski, Julia (1) Meijer, Mandy Dr. (1) Merks, Anne Margarete Dr. (1) Ohler, Uwe Prof. Dr. (1) Panakova, Daniela Dr. (1) Pombo, Ana Prof. Dr. (91) Rajewsky, Nikolaus Prof. Dr. (2) Robson, Michael Dr. (1) Sander, Maike Prof. Dr. (1) Schwarz, Roland Dr. (1) Selbach, Matthias Prof. Dr. (1) Serebreni, Leonid Dr. (1) Stachel-Braum, Philipp Noah Tim (1) Szabo, Dominik (2) Thieme, Christoph Dr. (3) Vidal, Marie Dr. (1) Vucicevic, Dubravka (1) Willemin, Andréa (1) Winick-Ng, Warren Dr. (3) Wolf, Susanne Dr. (1) Wyler, Emanuel Dr. (1) Zea Redondo, Luna (3) (-) Kukalev, Alexander Dr. (7) 2015 (1) 2017 (1) 2021 (3) 2023 (1) 2024 (1) Advanced Light Microscopy (2) AG Müller/Dechend (ECRC) (24) Anchored Signalling (4) Animal Phenotyping (6) Bioinformatics and Omics Data Science (5) Biology of Malignant Lymphomas (1) Cellular Neurosciences (3) Clinical Research Unit (3) Computational Regulatory Genomics (1) Developmental Biology / Signal Transduction (8) Developmental Neurobiology (3) Development and Function of Neural Circuits (1) Electron Microscopy (1) (-) Epigenetic Regulation and Chromatin Architecture (7) Experimental Ultrahigh-Field MR (6) From Cell States to Function (1) Gastrointestinal Barrier, Regeneration and Carcinogenesis (1) Genetics and Genomics of Cardiovascular Diseases (8) Genome Diversification & Integrity (1) Genome Engineering & Disease Models (146) Genomics (2) Host-microbiome factors in cardiovascular disease (4) Hypertension-caused End-Organ Damage (24) Hypertension-Mediated End-Organ Damage (24) Immune Dysregulations in Oncology (1) Immune Mechanisms and Human Antibodies (3) Immune Regulation and Cancer (11) Innate Immunity & Neuroinflammation (1) Integrative Vascular Biology (1) Intracellular Proteolysis (3) Magnetic Resonance (6) Mathematical Modelling of Cellular Processes (2) Mechanism-based Cancer Therapies (8) Microenvironmental Regulation in Autoimmunity and Cancer (1) Mobile DNA (3) Molecular Biology of Peptide Hormones (687) Molecular Cardiovascular Research (4) Molecular Immunology and Gene Therapy (18) Molecular Physiology of Somatic Sensation (5) Myology (3) Nephrology and Inflammatory Vascular Diseases (1) Neuroimmunology Laboratory (1) Non-coding RNAs and Mechanisms of Cytoplasmic Gene Regulation (21) Organoids (1) Out-patient Clinic for Neuroimmunology (1) Pancreatic Organoid Research and Disease Modeling (7) Pluripotent Stem Cells (4) Protein Production and Characterization (22) Proteome Dynamics (9) Proteomics (1) Proteomics and Metabolomics (4) Proteomics and Molecular Mechanisms of Neurodegenerative Diseases (6) Psychoneuroimmunology (1) Quantitative Stem Cell Biology (1) RNA Biology and Posttranscriptional Regulation (5) Structural Biology of Membrane-Associated Processes (4) Synaptic Transmission and Plasticity (1) Systems Biology Imaging (3) Systems Biology of Gene Regulatory Elements (8) Transgenics (146) Translational Bioinformatics (2) Translational Cardiology and Functional Genomics (2) Translational Oncology of Solid Tumors (4) 7 Results: Active Filter: Kukalev, Alexander Dr.Epigenetic Regulation and Chromatin Architecture Sort: Result score Newest to oldest Oldest to newest November 25, 2021 / Nature Cell-type specialization is encoded by specific chromatin topologies W. Winick-Ng A. Kukalev I. Harabula L. Zea-Redondo D. Szabó M. Meijer L. Serebreni Y. Zhang S. Bianco A.M. Chiariello I. Irastorza-Azcarate C.J. Thieme T.M. Sparks S. Carvalho L. Fiorillo F. Musella E. Irani E.T. Triglia A.A. Kolodziejczyk A. Abentung G. Apostolova E.J. Paul V. Franke R. Kempfer A. Akalin S.A. Teichmann G. Dechant M.A. Ungless M. Nicodemi L. Welch G. Castelo-Branco A. Pombo July 01, 2023 / Nat Methods Multiplex-GAM: genome-wide identification of chromatin contacts yields insights overlooked by Hi-C R.A. Beagrie C.J. Thieme C. Annunziatella C. Baugher Y. Zhang M. Schueler A. Kukalev R. Kempfer A.M. Chiariello S. Bianco Y. Li T. Davis A. Scialdone L.R. Welch M. Nicodemi A. Pombo April 01, 2024 / Biol Open SRRM2 splicing factor modulates cell fate in early development S. Carvalho L. Zea-Redondo T.C.C. Tang P. Stachel-Braum D. Miller P. Caldas A. Kukalev S. Diecke S. Grosswendt A.R. Grosso A. Pombo October 01, 2021 / Bioinformatics GAMIBHEAR: whole-genome haplotype reconstruction from Genome Architecture Mapping data J. Markowski R. Kempfer A. Kukalev I. Irastorza-Azcarate G. Loof B. Kehr A. Pombo S. Rahmann R.F. Schwarz May 01, 2021 / Nat Methods Comparison of the Hi-C, GAM and SPRITE methods using polymer models of chromatin L. Fiorillo F. Musella M. Conte R. Kempfer A.M. Chiariello S. Bianco A. Kukalev I. Irastorza-Azcarate A. Esposito A. Abraham A. Prisco A. Pombo M. Nicodemi December 19, 2015 / eLife Methylation of RNA polymerase II non-consensus Lysine residues marks early transcription in mammalian cells J.D. Dias T. Rito E. Torlai Triglia A. Kukalev C. Ferrai M. Chotalia E. Brookes H. Kimura A. Pombo October 16, 2017 / Mol Syst Biol RNA polymerase II primes Polycomb-repressed developmental genes throughout terminal neuronal differentiation C. Ferrai E. Torlai Triglia J.R. Risner-Janiczek T. Rito O.J.L. Rackham I. De Santiago A. Kukalev M. Nicodemi A. Akalin M. Li M.A. Ungless A. Pombo
November 25, 2021 / Nature Cell-type specialization is encoded by specific chromatin topologies W. Winick-Ng A. Kukalev I. Harabula L. Zea-Redondo D. Szabó M. Meijer L. Serebreni Y. Zhang S. Bianco A.M. Chiariello I. Irastorza-Azcarate C.J. Thieme T.M. Sparks S. Carvalho L. Fiorillo F. Musella E. Irani E.T. Triglia A.A. Kolodziejczyk A. Abentung G. Apostolova E.J. Paul V. Franke R. Kempfer A. Akalin S.A. Teichmann G. Dechant M.A. Ungless M. Nicodemi L. Welch G. Castelo-Branco A. Pombo
July 01, 2023 / Nat Methods Multiplex-GAM: genome-wide identification of chromatin contacts yields insights overlooked by Hi-C R.A. Beagrie C.J. Thieme C. Annunziatella C. Baugher Y. Zhang M. Schueler A. Kukalev R. Kempfer A.M. Chiariello S. Bianco Y. Li T. Davis A. Scialdone L.R. Welch M. Nicodemi A. Pombo
April 01, 2024 / Biol Open SRRM2 splicing factor modulates cell fate in early development S. Carvalho L. Zea-Redondo T.C.C. Tang P. Stachel-Braum D. Miller P. Caldas A. Kukalev S. Diecke S. Grosswendt A.R. Grosso A. Pombo
October 01, 2021 / Bioinformatics GAMIBHEAR: whole-genome haplotype reconstruction from Genome Architecture Mapping data J. Markowski R. Kempfer A. Kukalev I. Irastorza-Azcarate G. Loof B. Kehr A. Pombo S. Rahmann R.F. Schwarz
May 01, 2021 / Nat Methods Comparison of the Hi-C, GAM and SPRITE methods using polymer models of chromatin L. Fiorillo F. Musella M. Conte R. Kempfer A.M. Chiariello S. Bianco A. Kukalev I. Irastorza-Azcarate A. Esposito A. Abraham A. Prisco A. Pombo M. Nicodemi
December 19, 2015 / eLife Methylation of RNA polymerase II non-consensus Lysine residues marks early transcription in mammalian cells J.D. Dias T. Rito E. Torlai Triglia A. Kukalev C. Ferrai M. Chotalia E. Brookes H. Kimura A. Pombo
October 16, 2017 / Mol Syst Biol RNA polymerase II primes Polycomb-repressed developmental genes throughout terminal neuronal differentiation C. Ferrai E. Torlai Triglia J.R. Risner-Janiczek T. Rito O.J.L. Rackham I. De Santiago A. Kukalev M. Nicodemi A. Akalin M. Li M.A. Ungless A. Pombo