Scientific Publications Search Search Author Impact Factor Release Date Research Group Search Sort by RelevanceFrom A-ZAuthored onDate/Time RangeRelease date Order AscDesc Adami, Eleonora Dr. (3) Aigner, Denise (1) Akalin, Altuna Dr. (15) Altmueller, Janine Dr.med. (2) Bahry, Ella Dr. (1) Barke, Niclas (1) Berruezo Llacuna, Maria (1) Beule, Dieter Dr. (2) Birchmeier, Walter Prof. Dr. (1) Birchmeier-Kohler, Carmen Prof. Dr. (7) Blachut, Susanne (1) Blume, Alexander Dr. (1) Blüthgen, Nils (1) Borodina, Tatiana Dr. (1) Burkert, Christian Martin (1) Cerda Jara, Cledi Alicia (3) Chekulaeva, Marina Dr. (3) Chen, Chia-Yu (1) Chen, Wei Prof. Dr. (13) Chu, Van Trung Dr. (1) Conrad, Thomas Dr. (1) Del Giudice, Simone (1) Deter, Aylina (1) Diecke, Sebastian Dr. (3) Di Virgilio, Michela Prof. Dr. (1) Dube, Giuliana Marie (1) Emmenegger, Lisa (1) Escobar Fernandez, Helena Dr. (1) Falcke, Martin Prof. Dr. (2) Faxel, Miriam (1) Franke, Vedran Dr. (5) Freimuth, Jonas (1) Ghanbari, Mahsa Dr. (5) Gil, Marine (1) Gorski, Stan Dr. (1) Gotthardt, Michael Prof. Dr. (4) Graf, Robin Dr. (2) Grosswendt, Stefanie Dr. (4) Haghverdi, Laleh Dr. (1) Hartl, Kimberly (1) Heinemann, Udo Prof. Dr. (2) Henssen, Anton Prof. Dr. med. (2) Herzog, Margareta (6) Hinze, Christian Dr. med. Dipl.-Math. (3) Hirsekorn, Antje (12) Hollfinger, Irene (1) Hübner, Norbert Prof. Dr. (5) Hummel, Oliver (1) Junker, Jan Philipp Prof. Dr. (4) Jüttner, Rene Dr. (1) Kastelic, Nicolai (2) Kaufmann, Tom (1) Kempa, Stefan Dr. (7) Kieshauer, Janine (1) Kirchner, Marieluise Dr. (4) Kocks, Christine Dr. (16) Krabbe, Grietje Dr. (1) Krüger, Christina (1) Kühn, Ralf Dr. (3) Kunz, Severine Dr. (1) Lacadie, Scott Allen Dr. (10) Lahmann, Ines Dr. (1) Landthaler, Markus Prof. Dr. (28) León Perinán, Daniel (1) Lewin, Gary Prof. Dr. (1) Lindberg, Eric Lars-Helge (1) Lisowski, Pawel Dr. (2) Luft, Friedrich Prof. Dr. (1) Maatz, Henrike Dr. (2) Marg, Andreas Dr. (1) Mastrobuoni, Guido Dr. (7) Merks, Anne Margarete Dr. (1) Mertins, Philipp Dr. (2) Minia, Igor Dr. (1) Mintcheva, Janita (1) Monti, Remo (3) Müller, Thomas Dr. (2) Müllerke, Stefanie (1) Müthel, Stefanie (1) Neuschulz, Anika (2) Obermayer-Wasserscheid, Benedikt Dr. (10) Ofenbauer, Andreas Dr. (1) Ohler, Uwe Prof. Dr. (139) Oliveras Martinez, Anna Dr. (2) Panakova, Daniela Dr. (1) Patone, Giannino Dr. (1) Pombo, Ana Prof. Dr. (2) Preibisch, Stephan Dr. (3) Prigione, Alessandro Prof. Dr. (2) Quedenau, Claudia (1) Radke, Michael Dr. (1) Rahn, Hans-Peter Dr. (2) Rajewsky, Klaus Prof. Dr. (6) Rajewsky, Nikolaus Prof. Dr. (161) Rautenstrauch, Pia Josefine (3) Röefzaad, Claudia (1) Ruiz Orera, Jorge Dr. (1) Rybak-Wolf, Agnieszka Dr. (19) Sander, Maike Prof. Dr. (1) Schütz, Anja Dr. (1) Schwarz, Roland Dr. (2) Selbach, Matthias Prof. Dr. (15) Sigal, Michael Dr. (1) Spanjaard, Bastiaan Dr. (1) Sprink, Thiemo Dr. (1) Spuler, Simone Prof. (1) Streck, Adam Dr. (1) Tursun, Baris Dr. (2) Uyar, Bora Dr. (4) Vidal, Marie Dr. (1) Villamil, Gabriel (1) Vucicevic, Dubravka (3) Wandres, Miriam (1) Wanker, Erich Prof. Dr. (1) Willnow, Thomas Prof. Dr. (1) Woehler, Andrew Dr. (6) Wolf, Susanne Dr. (1) Wyler, Emanuel Dr. (11) Zampieri, Niccolo Dr. (1) Zauber, Henrik Dr. (2) Zywitza, Vera Dr. (3) (-) Wurmus, Ricardo (6) (-) Zinzen, Robert Patrick Dr. (6) 2015 (2) 2017 (4) 2018 (1) 2019 (3) 2022 (1) 2023 (1) AG Müller/Dechend (ECRC) (2) Anchored Signalling (16) Animal Phenotyping (10) Bioinformatics and Omics Data Science (10) Bioinformatics of RNA Structure and Transcriptome Regulation (2) Cardiac MRI (1) Cell Biology of Immunity (1) Clinical Research Unit (1) (-) Computational Regulatory Genomics (7) Developmental Biology / Signal Transduction (1) Flow Cytometry (1) From Cell States to Function (1) Genetics and Genomics of Cardiovascular Diseases (12) Genetics of Congenital Heart Disease (62) Genomics (2) Host-microbiome factors in cardiovascular disease (2) Hypertension-caused End-Organ Damage (2) Hypertension-Mediated End-Organ Damage (2) Immune Regulation and Cancer (1) Integrative Vascular Biology (1) Mathematical Modelling of Cellular Processes (1) Mechanism-based Cancer Therapies (1) Microenvironmental Regulation in Autoimmunity and Cancer (4) Molecular Biology of Peptide Hormones (3) Molecular Cardiovascular Research (1) Molecular Genetics of Chronic Inflammation and Allergic Disease (1) Molecular Immunology and Gene Therapy (34) Molecular Pathways in Cortical Development (1) Neuroimmunology Laboratory (1) Non-coding RNAs and Mechanisms of Cytoplasmic Gene Regulation (1) Organoids (1) Out-patient Clinic for Pediatric Allergology and Atopic Dermatitis (1) Pancreatic Organoid Research and Disease Modeling (1) Pluripotent Stem Cells (2) Proteome Dynamics (3) Proteomics (5) Proteomics and Metabolomics (1) RNA Biology and Posttranscriptional Regulation (3) Structural Biology of Membrane-Associated Processes (4) Systems Biology Imaging (1) (-) Systems Biology of Gene Regulatory Elements (7) Translational Bioinformatics (6) Translational Cardiology and Functional Genomics (1) Translational Oncology of Solid Tumors (1) Translational Tumorimmunology (2) 12 Results: Active Filter: Wurmus, RicardoZinzen, Robert Patrick Dr.Computational Regulatory GenomicsSystems Biology of Gene Regulatory Elements Sort: Result score Newest to oldest Oldest to newest October 01, 2023 / Nat Methods Spatiotemporal, optogenetic control of gene expression in organoids I. Legnini L. Emmenegger A. Zappulo A. Rybak-Wolf R. Wurmus A. Oliveras Martinez C. Cerda Jara A. Boltengagen T. Hessler G. Mastrobuoni S. Kempa R. Zinzen A. Woehler N. Rajewsky June 27, 2019 / Cell The translational landscape of the human heart S. van Heesch F. Witte V. Schneider-Lunitz J.F. Schulz E. Adami A. Faber M. Kirchner H. Maatz S. Blachut C.L. Sandmann M. Kanda C.L. Worth S. Schafer L. Calviello R. Merriott G. Patone O. Hummel E. Wyler B. Obermayer M. Mücke E.L. Lindberg F. Trnka S. Memczak M. Schilling L.E. Felkin P.J.R. Barton N.M. Quaife K. Vanezis S. Diecke M. Mukai N. Mah S.J. Oh A. Kurtz C. Schramm D. Schwinge M. Sebode M. Harakalova F.W. Asselbergs A. Vink R.A. de Weger S. Viswanathan A.A. Widjaja A. Gärtner-Rommel H. Milting C. Dos Remedios C. Knosalla P. Mertins M. Landthaler M. Vingron W.A. Linke J.G. Seidman C.E. Seidman N. Rajewsky U. Ohler S.A. Cook N. Hubner February 21, 2019 / Genome Biol Reproducible inference of transcription factor footprints in ATAC-seq and DNase-seq datasets using protocol-specific bias modeling A. Karabacak Calviello A. Hirsekorn R. Wurmus D. Yusuf U. Ohler April 09, 2019 / Nat Commun Global identification of functional microRNA-mRNA interactions in Drosophila H.H. Wessels S. Lebedeva A. Hirsekorn R. Wurmus A. Akalin N. Mukherjee U. Ohler October 26, 2018 / Nat Commun Determinants of promoter and enhancer transcription directionality in metazoans M.M. Ibrahim A. Karabacak A. Glahs E. Kolundzic A. Hirsekorn A. Carda B. Tursun R.P. Zinzen S.A. Lacadie U. Ohler October 26, 2017 / Genome Biol McEnhancer: predicting gene expression via semi-supervised assignment of enhancers to target genes D. Hafez A. Karabacak S. Krueger Y.C. Hwang L.S. Wang R.P. Zinzen U. Ohler January 28, 2015 / Nucleic Acids Res DoRiNA 2.0-upgrading the doRiNA database of RNA interactions in post-transcriptional regulation K. Blin C. Dieterich R. Wurmus N. Rajewsky M. Landthaler A. Akalin May 19, 2017 / BMC Biol Cell fixation and preservation for droplet-based single-cell transcriptomics J. Alles N. Karaiskos S.D. Praktiknjo S. Grosswendt P. Wahle P.L. Ruffault S. Ayoub L. Schreyer A. Boltengagen C. Birchmeier R. Zinzen C. Kocks N. Rajewsky June 02, 2017 / Nucleic Acids Res RCAS: an RNA centric annotation system for transcriptome-wide regions of interest B. Uyar D. Yusuf R. Wurmus N. Rajewsky U. Ohler A. Akalin October 13, 2017 / Science The Drosophila embryo at single-cell transcriptome resolution N. Karaiskos P. Wahle J. Alles A. Boltengagen S. Ayoub C. Kipar C. Kocks N. Rajewsky R.P. Zinzen Pagination Current page 1 Page 2 Next page Next › Last page Last »
October 01, 2023 / Nat Methods Spatiotemporal, optogenetic control of gene expression in organoids I. Legnini L. Emmenegger A. Zappulo A. Rybak-Wolf R. Wurmus A. Oliveras Martinez C. Cerda Jara A. Boltengagen T. Hessler G. Mastrobuoni S. Kempa R. Zinzen A. Woehler N. Rajewsky
June 27, 2019 / Cell The translational landscape of the human heart S. van Heesch F. Witte V. Schneider-Lunitz J.F. Schulz E. Adami A. Faber M. Kirchner H. Maatz S. Blachut C.L. Sandmann M. Kanda C.L. Worth S. Schafer L. Calviello R. Merriott G. Patone O. Hummel E. Wyler B. Obermayer M. Mücke E.L. Lindberg F. Trnka S. Memczak M. Schilling L.E. Felkin P.J.R. Barton N.M. Quaife K. Vanezis S. Diecke M. Mukai N. Mah S.J. Oh A. Kurtz C. Schramm D. Schwinge M. Sebode M. Harakalova F.W. Asselbergs A. Vink R.A. de Weger S. Viswanathan A.A. Widjaja A. Gärtner-Rommel H. Milting C. Dos Remedios C. Knosalla P. Mertins M. Landthaler M. Vingron W.A. Linke J.G. Seidman C.E. Seidman N. Rajewsky U. Ohler S.A. Cook N. Hubner
February 21, 2019 / Genome Biol Reproducible inference of transcription factor footprints in ATAC-seq and DNase-seq datasets using protocol-specific bias modeling A. Karabacak Calviello A. Hirsekorn R. Wurmus D. Yusuf U. Ohler
April 09, 2019 / Nat Commun Global identification of functional microRNA-mRNA interactions in Drosophila H.H. Wessels S. Lebedeva A. Hirsekorn R. Wurmus A. Akalin N. Mukherjee U. Ohler
October 26, 2018 / Nat Commun Determinants of promoter and enhancer transcription directionality in metazoans M.M. Ibrahim A. Karabacak A. Glahs E. Kolundzic A. Hirsekorn A. Carda B. Tursun R.P. Zinzen S.A. Lacadie U. Ohler
October 26, 2017 / Genome Biol McEnhancer: predicting gene expression via semi-supervised assignment of enhancers to target genes D. Hafez A. Karabacak S. Krueger Y.C. Hwang L.S. Wang R.P. Zinzen U. Ohler
January 28, 2015 / Nucleic Acids Res DoRiNA 2.0-upgrading the doRiNA database of RNA interactions in post-transcriptional regulation K. Blin C. Dieterich R. Wurmus N. Rajewsky M. Landthaler A. Akalin
May 19, 2017 / BMC Biol Cell fixation and preservation for droplet-based single-cell transcriptomics J. Alles N. Karaiskos S.D. Praktiknjo S. Grosswendt P. Wahle P.L. Ruffault S. Ayoub L. Schreyer A. Boltengagen C. Birchmeier R. Zinzen C. Kocks N. Rajewsky
June 02, 2017 / Nucleic Acids Res RCAS: an RNA centric annotation system for transcriptome-wide regions of interest B. Uyar D. Yusuf R. Wurmus N. Rajewsky U. Ohler A. Akalin
October 13, 2017 / Science The Drosophila embryo at single-cell transcriptome resolution N. Karaiskos P. Wahle J. Alles A. Boltengagen S. Ayoub C. Kipar C. Kocks N. Rajewsky R.P. Zinzen