Scientific Publications Search Search Author Impact Factor Release Date Research Group Search Sort by RelevanceFrom A-ZAuthored onDate/Time RangeRelease date Order AscDesc Akalin, Altuna Dr. (4) Beule, Dieter Dr. (1) Carvalho, Silvia Filipa (2) Diecke, Sebastian Dr. (1) Franke, Vedran Dr. (2) Gil, Marine (1) Gorski, Stan Dr. (1) Grosswendt, Stefanie Dr. (1) Harabula, Izabela-Cezara (4) Hirsekorn, Antje (1) Hübner, Norbert Prof. Dr. (1) Irastorza Azcarate, Ibai Dr. (5) Junker, Jan Philipp Prof. Dr. (1) Kettenmann, Helmut Prof. Dr. (1) Kocks, Christine Dr. (1) Krabbe, Grietje Dr. (1) Kukalev, Alexander Dr. (7) Lacadie, Scott Allen Dr. (1) Landthaler, Markus Prof. Dr. (1) Lupianez Garcia, Dario Jesus Dr. (1) Markowski, Julia (1) Meijer, Mandy Dr. (1) Merks, Anne Margarete Dr. (1) Ohler, Uwe Prof. Dr. (1) Panakova, Daniela Dr. (1) Pombo, Ana Prof. Dr. (91) Rajewsky, Nikolaus Prof. Dr. (2) Robson, Michael Dr. (1) Sander, Maike Prof. Dr. (1) Schwarz, Roland Dr. (1) Selbach, Matthias Prof. Dr. (1) Serebreni, Leonid Dr. (1) Stachel-Braum, Philipp Noah Tim (1) Szabo, Dominik (2) Thieme, Christoph Dr. (3) Vidal, Marie Dr. (1) Vucicevic, Dubravka (1) Willemin, Andréa (1) Winick-Ng, Warren Dr. (3) Wolf, Susanne Dr. (1) Zea Redondo, Luna (3) (-) Wyler, Emanuel Dr. (1) 2016 (1) 2017 (1) 2020 (1) 2021 (3) 2022 (1) 2023 (1) Advanced Light Microscopy (1) AG Schreiber [ECRC] (2) Anchored Signalling (7) Bioinformatics and Omics Data Science (6) Biology of Malignant Lymphomas (1) Biomedical Image Analysis (46) Cancer Genetics and Cellular Stress Responses (2) Cardiac MRI (2) Cellular Neurosciences (5) Computational methodologies and omic analytics (1) Computational Regulatory Genomics (6) Developmental Neurobiology (2) Electron Microscopy (1) (-) Epigenetic Regulation and Chromatin Architecture (8) Experimental Ultrahigh-Field MR (68) Genetics and Genomics of Cardiovascular Diseases (3) Genomics (2) Host-microbiome factors in cardiovascular disease (1) Image Data Analysis (1) Immune Regulation and Cancer (1) Innate Immunity & Neuroinflammation (7) Intracellular Proteolysis (1) Magnetic Resonance (68) Mathematical Modelling of Cellular Processes (2) Microenvironmental Regulation in Autoimmunity and Cancer (3) Molecular Biology of Peptide Hormones (3) Molecular Physiology of Somatic Sensation (6) Nephrology and Inflammatory Vascular Diseases (3) Neural Circuits and Behaviour (1) Neuroimmunology Laboratory (3) Non-coding RNAs and Mechanisms of Cytoplasmic Gene Regulation (2) Organoids (1) Out-patient Clinic for Neuroimmunology (9) Pluripotent Stem Cells (2) Protein Production and Characterization (4) Proteome Dynamics (10) Proteomics (5) Proteomics and Metabolomics (4) Proteomics and Molecular Mechanisms of Neurodegenerative Diseases (1) Psychoneuroimmunology (3) Quantitative Developmental Biology (1) RNA Biology and Posttranscriptional Regulation (64) Structural Biology of Membrane-Associated Processes (2) Synaptic Transmission and Plasticity (1) Systems Biology Imaging (1) Systems Biology of Gene Regulatory Elements (9) Translational Bioinformatics (13) Translational Cardiology and Functional Genomics (3) Translational Oncology of Solid Tumors (2) Translational Tumorimmunology (3) 8 Results: Active Filter: Wyler, Emanuel Dr.Epigenetic Regulation and Chromatin Architecture Sort: Result score Newest to oldest Oldest to newest October 01, 2021 / Bioinformatics GAMIBHEAR: whole-genome haplotype reconstruction from Genome Architecture Mapping data J. Markowski R. Kempfer A. Kukalev I. Irastorza-Azcarate G. Loof B. Kehr A. Pombo S. Rahmann R.F. Schwarz May 01, 2021 / Nat Methods Comparison of the Hi-C, GAM and SPRITE methods using polymer models of chromatin L. Fiorillo F. Musella M. Conte R. Kempfer A.M. Chiariello S. Bianco A. Kukalev I. Irastorza-Azcarate A. Esposito A. Abraham A. Prisco A. Pombo M. Nicodemi October 13, 2016 / Nature Formation of new chromatin domains determines pathogenicity of genomic duplications M. Franke D.M. Ibrahim G. Andrey W. Schwarzer V. Heinrich R. Schoepflin K. Kraft R. Kempfer I. Jerkovic W.L. Chan M. Spielmann B. Timmermann L. Wittler I. Kurth P. Cambiaso O. Zuffardi G. Houge L. Lambie F. Brancati A. Pombo M. Vingron F. Spitz S. Mundlos April 01, 2020 / Nat Rev Genet Methods for mapping 3D chromosome architecture R. Kempfer A. Pombo October 31, 2017 / Genome Biol Widespread activation of antisense transcription of the host genome during herpes simplex virus 1 infection E. Wyler J. Menegatti V. Franke C. Kocks A. Boltengagen T. Hennig K. Theil A. Rutkowski C. Ferrai L. Baer L. Kermas C. Friedel N. Rajewsky A. Akalin L. Dölken F. Grässer M. Landthaler November 25, 2021 / Nature Cell-type specialization is encoded by specific chromatin topologies W. Winick-Ng A. Kukalev I. Harabula L. Zea-Redondo D. Szabó M. Meijer L. Serebreni Y. Zhang S. Bianco A.M. Chiariello I. Irastorza-Azcarate C.J. Thieme T.M. Sparks S. Carvalho L. Fiorillo F. Musella E. Irani E.T. Triglia A.A. Kolodziejczyk A. Abentung G. Apostolova E.J. Paul V. Franke R. Kempfer A. Akalin S.A. Teichmann G. Dechant M.A. Ungless M. Nicodemi L. Welch G. Castelo-Branco A. Pombo January 13, 2022 / Cell Genom Single-cell-resolved dynamics of chromatin architecture delineate cell and regulatory states in zebrafish embryos A.C. McGarvey W. Kopp D. Vučićević K. Mattonet R. Kempfer A. Hirsekorn I. Bilić M. Gil A. Trinks A.M. Merks D. Panáková A. Pombo A. Akalin J.P. Junker D.Y.R. Stainier D. Garfield U. Ohler S.A. Lacadie July 01, 2023 / Nat Methods Multiplex-GAM: genome-wide identification of chromatin contacts yields insights overlooked by Hi-C R.A. Beagrie C.J. Thieme C. Annunziatella C. Baugher Y. Zhang M. Schueler A. Kukalev R. Kempfer A.M. Chiariello S. Bianco Y. Li T. Davis A. Scialdone L.R. Welch M. Nicodemi A. Pombo
October 01, 2021 / Bioinformatics GAMIBHEAR: whole-genome haplotype reconstruction from Genome Architecture Mapping data J. Markowski R. Kempfer A. Kukalev I. Irastorza-Azcarate G. Loof B. Kehr A. Pombo S. Rahmann R.F. Schwarz
May 01, 2021 / Nat Methods Comparison of the Hi-C, GAM and SPRITE methods using polymer models of chromatin L. Fiorillo F. Musella M. Conte R. Kempfer A.M. Chiariello S. Bianco A. Kukalev I. Irastorza-Azcarate A. Esposito A. Abraham A. Prisco A. Pombo M. Nicodemi
October 13, 2016 / Nature Formation of new chromatin domains determines pathogenicity of genomic duplications M. Franke D.M. Ibrahim G. Andrey W. Schwarzer V. Heinrich R. Schoepflin K. Kraft R. Kempfer I. Jerkovic W.L. Chan M. Spielmann B. Timmermann L. Wittler I. Kurth P. Cambiaso O. Zuffardi G. Houge L. Lambie F. Brancati A. Pombo M. Vingron F. Spitz S. Mundlos
October 31, 2017 / Genome Biol Widespread activation of antisense transcription of the host genome during herpes simplex virus 1 infection E. Wyler J. Menegatti V. Franke C. Kocks A. Boltengagen T. Hennig K. Theil A. Rutkowski C. Ferrai L. Baer L. Kermas C. Friedel N. Rajewsky A. Akalin L. Dölken F. Grässer M. Landthaler
November 25, 2021 / Nature Cell-type specialization is encoded by specific chromatin topologies W. Winick-Ng A. Kukalev I. Harabula L. Zea-Redondo D. Szabó M. Meijer L. Serebreni Y. Zhang S. Bianco A.M. Chiariello I. Irastorza-Azcarate C.J. Thieme T.M. Sparks S. Carvalho L. Fiorillo F. Musella E. Irani E.T. Triglia A.A. Kolodziejczyk A. Abentung G. Apostolova E.J. Paul V. Franke R. Kempfer A. Akalin S.A. Teichmann G. Dechant M.A. Ungless M. Nicodemi L. Welch G. Castelo-Branco A. Pombo
January 13, 2022 / Cell Genom Single-cell-resolved dynamics of chromatin architecture delineate cell and regulatory states in zebrafish embryos A.C. McGarvey W. Kopp D. Vučićević K. Mattonet R. Kempfer A. Hirsekorn I. Bilić M. Gil A. Trinks A.M. Merks D. Panáková A. Pombo A. Akalin J.P. Junker D.Y.R. Stainier D. Garfield U. Ohler S.A. Lacadie
July 01, 2023 / Nat Methods Multiplex-GAM: genome-wide identification of chromatin contacts yields insights overlooked by Hi-C R.A. Beagrie C.J. Thieme C. Annunziatella C. Baugher Y. Zhang M. Schueler A. Kukalev R. Kempfer A.M. Chiariello S. Bianco Y. Li T. Davis A. Scialdone L.R. Welch M. Nicodemi A. Pombo