Scientific Publications Search Search Author Impact Factor Release Date Research Group Search Sort by RelevanceFrom A-ZAuthored onDate/Time RangeRelease date Order AscDesc Adami, Eleonora Dr. (1) Akalin, Altuna Dr. (9) Beule, Dieter Dr. (2) Birchmeier-Kohler, Carmen Prof. Dr. (1) Blachut, Susanne (1) Chekulaeva, Marina Dr. (1) Chen, Chia-Yu (1) Chen, Wei Prof. Dr. (1) Diecke, Sebastian Dr. (2) Franke, Vedran Dr. (1) Ghanbari, Mahsa Dr. (5) Gil, Marine (1) Gotthardt, Michael Prof. Dr. (2) Henssen, Anton Prof. Dr. med. (1) Hübner, Norbert Prof. Dr. (2) Hummel, Oliver (1) Huryn, Viktoriia (1) Junker, Jan Philipp Prof. Dr. (2) Kaufmann, Tom (1) Kempa, Stefan Dr. (1) Kirchner, Marieluise Dr. (1) Lacadie, Scott Allen Dr. (10) Landthaler, Markus Prof. Dr. (11) Lindberg, Eric Lars-Helge (1) Maatz, Henrike Dr. (1) Mastrobuoni, Guido Dr. (1) Merks, Anne Margarete Dr. (1) Mertins, Philipp Dr. (1) Mintcheva, Janita (1) Monti, Remo (5) Müller, Thomas Dr. (1) Müthel, Stefanie (1) Neuschulz, Anika (1) Obermayer-Wasserscheid, Benedikt Dr. (3) Ofenbauer, Andreas Dr. (1) Ohler, Uwe Prof. Dr. (144) Panakova, Daniela Dr. (1) Patone, Giannino Dr. (1) Pombo, Ana Prof. Dr. (1) Preibisch, Stephan Dr. (1) Rajewsky, Nikolaus Prof. Dr. (5) Rautenstrauch, Pia Josefine (3) Röefzaad, Claudia (1) Ruiz Orera, Jorge Dr. (1) Sander, Maike Prof. Dr. (1) Schwarz, Roland Dr. (2) Selbach, Matthias Prof. Dr. (10) Sprink, Thiemo Dr. (1) Streck, Adam Dr. (1) Tursun, Baris Dr. (2) Uyar, Bora Dr. (2) Villamil, Gabriel (1) Vucicevic, Dubravka (3) Woehler, Andrew Dr. (1) Wurmus, Ricardo (3) Wyler, Emanuel Dr. (3) Zauber, Henrik Dr. (2) Zinzen, Robert Patrick Dr. (3) (-) Hirsekorn, Antje (12) 2015 (1) 2016 (2) 2017 (3) 2018 (3) 2019 (2) 2020 (2) 2021 (1) 2022 (1) AG Müller/Dechend (ECRC) (1) AG Schreiber [ECRC] (2) Biobank (1) Bioinformatics and Omics Data Science (6) Cardiac MRI (8) Cellular Neurosciences (4) Clinical Research Unit (1) (-) Computational Regulatory Genomics (15) Developmental Biology / Signal Transduction (6) Epigenetic Regulation and Chromatin Architecture (1) Experimental Ultrahigh-Field MR (69) Genetics and Genomics of Cardiovascular Diseases (5) Genome Diversification & Integrity (2) Genome Engineering & Disease Models (2) Genomics (3) Host-microbiome factors in cardiovascular disease (1) Hypertension-caused End-Organ Damage (1) Hypertension-Mediated End-Organ Damage (1) Innate Immunity & Neuroinflammation (7) Kidney Cell Engineering (1) Magnetic Resonance (69) Mathematical Modelling of Cellular Processes (2) Mobile DNA (3) Molecular Biology of Peptide Hormones (2) Molecular Epidemiology (1) Molecular Oncology (1) Molecular Physiology of Somatic Sensation (1) Myology (117) Nephrology and Inflammatory Vascular Diseases (2) Neuroimmunology Laboratory (3) Non-coding RNAs and Mechanisms of Cytoplasmic Gene Regulation (1) Out-patient Clinic for Neuroimmunology (8) Pluripotent Stem Cells (4) Protein Production and Characterization (1) Proteome Dynamics (7) Proteomics (3) Proteomics and Metabolomics (4) Psychoneuroimmunology (2) Quantitative Developmental Biology (1) Quantitative Stem Cell Biology (1) RNA Biology and Posttranscriptional Regulation (11) Stem Cell Modeling of Development and Disease (1) Structural Biology of Membrane-Associated Processes (1) Systems Biology of Gene Regulatory Elements (1) Transgenics (2) Translational Bioinformatics (6) Translational Cardiology and Functional Genomics (1) 15 Results: Active Filter: Hirsekorn, AntjeComputational Regulatory Genomics Sort: Result score Newest to oldest Oldest to newest January, 2017 / Nat Struct Mol Biol Integrative classification of human coding and noncoding genes through RNA metabolism profiles N. Mukherjee L. Calviello A. Hirsekorn S. de Pretis M. Pelizzola U. Ohler February 02, 2017 / Cell Stem Cell A multi-step transcriptional and chromatin state cascade underlies motor neuron programming from embryonic stem cells S. Velasco M.M. Ibrahim A. Kakumanu G. Garipler B. Aydin M.A. Al-Sayegh A. Hirsekorn F. Abdul-Rahman R. Satija U. Ohler S. Mahony E.O. Mazzoni August, 2017 / Genome Res DDX54 regulates transcriptome dynamics during DNA damage response M. Milek K. Imami N. Mukherjee F. De Bortoli U. Zinnall O. Hazapis C. Trahan M. Oeffinger F. Heyd U. Ohler M. Selbach M. Landthaler March 04, 2018 / RNA Biol Expanding the map of protein-RNA interaction sites via cell fusion followed by PAR-CLIP F. Hinze P. Drewe-Boss M. Milek U. Ohler M. Landthaler M. Gotthardt January, 2020 / Nat Genet Extrachromosomal circular DNA drives oncogenic genome remodeling in neuroblastoma R.P. Koche E. Rodriguez-Fos K. Helmsauer M. Burkert I.C. MacArthur J. Maag R. Chamorro N. Munoz-Perez M. Puiggròs H. Dorado Garcia Y. Bei C. Röefzaad V. Bardinet A. Szymansky A. Winkler T. Thole N. Timme K. Kasack S. Fuchs F. Klironomos N. Thiessen E. Blanc K. Schmelz A. Künkele P. Hundsdörfer C. Rosswog J. Theissen D. Beule H. Deubzer S. Sauer J. Toedling M. Fischer F. Hertwig R.F. Schwarz A. Eggert D. Torrents J.H. Schulte A.G. Henssen February 21, 2019 / Genome Biol Reproducible inference of transcription factor footprints in ATAC-seq and DNase-seq datasets using protocol-specific bias modeling A. Karabacak Calviello A. Hirsekorn R. Wurmus D. Yusuf U. Ohler April 09, 2019 / Nat Commun Global identification of functional microRNA-mRNA interactions in Drosophila H.H. Wessels S. Lebedeva A. Hirsekorn R. Wurmus A. Akalin N. Mukherjee U. Ohler August, 2020 / Nat Struct Mol Biol Quantification of translation uncovers the functions of the alternative transcriptome L. Calviello A. Hirsekorn U. Ohler October 26, 2018 / Nat Commun Determinants of promoter and enhancer transcription directionality in metazoans M.M. Ibrahim A. Karabacak A. Glahs E. Kolundzic A. Hirsekorn A. Carda B. Tursun R.P. Zinzen S.A. Lacadie U. Ohler September 10, 2018 / Dev Cell FACT sets a barrier for cell fate reprogramming in Caenorhabditis elegans and human cells E. Kolundzic A. Ofenbauer S.I. Bulut B. Uyar G. Baytek A. Sommermeier S. Seelk M. He A. Hirsekorn D. Vucicevic A. Akalin S. Diecke S.A. Lacadie B. Tursun Pagination Current page 1 Page 2 Next page Next › Last page Last »
January, 2017 / Nat Struct Mol Biol Integrative classification of human coding and noncoding genes through RNA metabolism profiles N. Mukherjee L. Calviello A. Hirsekorn S. de Pretis M. Pelizzola U. Ohler
February 02, 2017 / Cell Stem Cell A multi-step transcriptional and chromatin state cascade underlies motor neuron programming from embryonic stem cells S. Velasco M.M. Ibrahim A. Kakumanu G. Garipler B. Aydin M.A. Al-Sayegh A. Hirsekorn F. Abdul-Rahman R. Satija U. Ohler S. Mahony E.O. Mazzoni
August, 2017 / Genome Res DDX54 regulates transcriptome dynamics during DNA damage response M. Milek K. Imami N. Mukherjee F. De Bortoli U. Zinnall O. Hazapis C. Trahan M. Oeffinger F. Heyd U. Ohler M. Selbach M. Landthaler
March 04, 2018 / RNA Biol Expanding the map of protein-RNA interaction sites via cell fusion followed by PAR-CLIP F. Hinze P. Drewe-Boss M. Milek U. Ohler M. Landthaler M. Gotthardt
January, 2020 / Nat Genet Extrachromosomal circular DNA drives oncogenic genome remodeling in neuroblastoma R.P. Koche E. Rodriguez-Fos K. Helmsauer M. Burkert I.C. MacArthur J. Maag R. Chamorro N. Munoz-Perez M. Puiggròs H. Dorado Garcia Y. Bei C. Röefzaad V. Bardinet A. Szymansky A. Winkler T. Thole N. Timme K. Kasack S. Fuchs F. Klironomos N. Thiessen E. Blanc K. Schmelz A. Künkele P. Hundsdörfer C. Rosswog J. Theissen D. Beule H. Deubzer S. Sauer J. Toedling M. Fischer F. Hertwig R.F. Schwarz A. Eggert D. Torrents J.H. Schulte A.G. Henssen
February 21, 2019 / Genome Biol Reproducible inference of transcription factor footprints in ATAC-seq and DNase-seq datasets using protocol-specific bias modeling A. Karabacak Calviello A. Hirsekorn R. Wurmus D. Yusuf U. Ohler
April 09, 2019 / Nat Commun Global identification of functional microRNA-mRNA interactions in Drosophila H.H. Wessels S. Lebedeva A. Hirsekorn R. Wurmus A. Akalin N. Mukherjee U. Ohler
August, 2020 / Nat Struct Mol Biol Quantification of translation uncovers the functions of the alternative transcriptome L. Calviello A. Hirsekorn U. Ohler
October 26, 2018 / Nat Commun Determinants of promoter and enhancer transcription directionality in metazoans M.M. Ibrahim A. Karabacak A. Glahs E. Kolundzic A. Hirsekorn A. Carda B. Tursun R.P. Zinzen S.A. Lacadie U. Ohler
September 10, 2018 / Dev Cell FACT sets a barrier for cell fate reprogramming in Caenorhabditis elegans and human cells E. Kolundzic A. Ofenbauer S.I. Bulut B. Uyar G. Baytek A. Sommermeier S. Seelk M. He A. Hirsekorn D. Vucicevic A. Akalin S. Diecke S.A. Lacadie B. Tursun