Scientific Publications Search Search Author Impact Factor Release Date Research Group Search Sort by RelevanceFrom A-ZAuthored onDate/Time RangeRelease date Order AscDesc Adami, Eleonora Dr. (1) Akalin, Altuna Dr. (9) Beule, Dieter Dr. (2) Birchmeier-Kohler, Carmen Prof. Dr. (1) Blachut, Susanne (1) Burkert, Christian Martin (1) Chekulaeva, Marina Dr. (1) Chen, Chia-Yu (1) Diecke, Sebastian Dr. (2) Franke, Vedran Dr. (1) Ghanbari, Mahsa Dr. (5) Gil, Marine (1) Gotthardt, Michael Prof. Dr. (2) Henssen, Anton Prof. Dr. med. (1) Hübner, Norbert Prof. Dr. (2) Hummel, Oliver (1) Junker, Jan Philipp Prof. Dr. (2) Kaufmann, Tom (1) Kempa, Stefan Dr. (1) Kirchner, Marieluise Dr. (1) Lacadie, Scott Allen Dr. (10) Landthaler, Markus Prof. Dr. (10) Lindberg, Eric Lars-Helge (1) Maatz, Henrike Dr. (1) Merks, Anne Margarete Dr. (1) Mertins, Philipp Dr. (1) Mintcheva, Janita (1) Monti, Remo (3) Müller, Thomas Dr. (1) Müthel, Stefanie (1) Neuschulz, Anika (1) Obermayer-Wasserscheid, Benedikt Dr. (3) Ofenbauer, Andreas Dr. (1) Ohler, Uwe Prof. Dr. (139) Panakova, Daniela Dr. (1) Patone, Giannino Dr. (1) Preibisch, Stephan Dr. (1) Rajewsky, Nikolaus Prof. Dr. (5) Rautenstrauch, Pia Josefine (3) Röefzaad, Claudia (1) Ruiz Orera, Jorge Dr. (1) Sander, Maike Prof. Dr. (1) Schwarz, Roland Dr. (2) Selbach, Matthias Prof. Dr. (9) Spanjaard, Bastiaan Dr. (1) Sprink, Thiemo Dr. (1) Streck, Adam Dr. (1) Tursun, Baris Dr. (2) Uyar, Bora Dr. (2) Villamil, Gabriel (1) Vucicevic, Dubravka (3) Woehler, Andrew Dr. (1) Wurmus, Ricardo (3) Wyler, Emanuel Dr. (3) Zauber, Henrik Dr. (2) Zinzen, Robert Patrick Dr. (3) (-) Hirsekorn, Antje (12) (-) Mastrobuoni, Guido Dr. (1) (-) Pombo, Ana Prof. Dr. (1) 2015 (2) 2016 (2) 2017 (2) 2018 (2) 2019 (2) 2020 (1) 2021 (1) 2022 (1) AG Müller/Dechend (ECRC) (2) Bioinformatics and Omics Data Science (6) Cellular Neurosciences (1) (-) Computational Regulatory Genomics (13) Developmental Biology / Signal Transduction (1) Epigenetic Modifications in Neuroblastoma (3) Epigenetic Regulation and Chromatin Architecture (91) Flow Cytometry (1) From Cell States to Function (1) Genetics and Genomics of Cardiovascular Diseases (1) Genome Diversification & Integrity (1) Host-microbiome factors in cardiovascular disease (2) Hypertension-caused End-Organ Damage (2) Hypertension-Mediated End-Organ Damage (2) Immune Regulation and Cancer (4) Mathematical Modelling of Cellular Processes (2) Molecular Cardiovascular Research (2) Organoids (2) Pancreatic Organoid Research and Disease Modeling (1) Pluripotent Stem Cells (2) Protein Production and Characterization (1) Proteome Dynamics (5) Proteomics and Metabolomics (32) Psychoneuroimmunology (1) Quantitative Developmental Biology (1) RNA Biology and Posttranscriptional Regulation (11) Systems Biology Imaging (1) Systems Biology of Gene Regulatory Elements (9) Translational Bioinformatics (3) 13 Results: Active Filter: Hirsekorn, AntjeMastrobuoni, Guido Dr.Pombo, Ana Prof. Dr.Computational Regulatory Genomics Sort: Result score Newest to oldest Oldest to newest September 14, 2015 / Genome Biol Extensive identification and analysis of conserved small ORFs in animals S.D. Mackowiak H. Zauber C. Bielow D. Thiel K. Kutz L. Calviello G. Mastrobuoni N. Rajewsky S. Kempa M. Selbach B. Obermayer September 15, 2015 / BMC Evol Biol Ancient gene duplications have shaped developmental stage-specific expression in Pristionchus pacificus P. Baskaran C. Roedelsperger N. Prabh V. Serobyan G.V. Markov A. Hirsekorn C. Dieterich January 13, 2022 / Cell Genom Single-cell-resolved dynamics of chromatin architecture delineate cell and regulatory states in zebrafish embryos A.C. McGarvey W. Kopp D. Vučićević K. Mattonet R. Kempfer A. Hirsekorn I. Bilić M. Gil A. Trinks A.M. Merks D. Panáková A. Pombo A. Akalin J.P. Junker D.Y.R. Stainier D. Garfield U. Ohler S.A. Lacadie August 01, 2020 / Nat Struct Mol Biol Quantification of translation uncovers the functions of the alternative transcriptome L. Calviello A. Hirsekorn U. Ohler January 01, 2017 / Nat Struct Mol Biol Integrative classification of human coding and noncoding genes through RNA metabolism profiles N. Mukherjee L. Calviello A. Hirsekorn S. de Pretis M. Pelizzola U. Ohler February 02, 2017 / Cell Stem Cell A multi-step transcriptional and chromatin state cascade underlies motor neuron programming from embryonic stem cells S. Velasco M.M. Ibrahim A. Kakumanu G. Garipler B. Aydin M.A. Al-Sayegh A. Hirsekorn F. Abdul-Rahman R. Satija U. Ohler S. Mahony E.O. Mazzoni January 01, 2016 / Methods Mol Biol Identifying RBP targets with RIP-seq H.H. Wessels A. Hirsekorn U. Ohler N. Mukherjee February 01, 2016 / Nat Methods Detecting actively translated open reading frames in ribosome profiling data L. Calviello N. Mukherjee E. Wyler H. Zauber A. Hirsekorn M. Selbach M. Landthaler B. Obermayer U. Ohler October 26, 2018 / Nat Commun Determinants of promoter and enhancer transcription directionality in metazoans M.M. Ibrahim A. Karabacak A. Glahs E. Kolundzic A. Hirsekorn A. Carda B. Tursun R.P. Zinzen S.A. Lacadie U. Ohler February 21, 2019 / Genome Biol Reproducible inference of transcription factor footprints in ATAC-seq and DNase-seq datasets using protocol-specific bias modeling A. Karabacak Calviello A. Hirsekorn R. Wurmus D. Yusuf U. Ohler Pagination Current page 1 Page 2 Next page Next › Last page Last »
September 14, 2015 / Genome Biol Extensive identification and analysis of conserved small ORFs in animals S.D. Mackowiak H. Zauber C. Bielow D. Thiel K. Kutz L. Calviello G. Mastrobuoni N. Rajewsky S. Kempa M. Selbach B. Obermayer
September 15, 2015 / BMC Evol Biol Ancient gene duplications have shaped developmental stage-specific expression in Pristionchus pacificus P. Baskaran C. Roedelsperger N. Prabh V. Serobyan G.V. Markov A. Hirsekorn C. Dieterich
January 13, 2022 / Cell Genom Single-cell-resolved dynamics of chromatin architecture delineate cell and regulatory states in zebrafish embryos A.C. McGarvey W. Kopp D. Vučićević K. Mattonet R. Kempfer A. Hirsekorn I. Bilić M. Gil A. Trinks A.M. Merks D. Panáková A. Pombo A. Akalin J.P. Junker D.Y.R. Stainier D. Garfield U. Ohler S.A. Lacadie
August 01, 2020 / Nat Struct Mol Biol Quantification of translation uncovers the functions of the alternative transcriptome L. Calviello A. Hirsekorn U. Ohler
January 01, 2017 / Nat Struct Mol Biol Integrative classification of human coding and noncoding genes through RNA metabolism profiles N. Mukherjee L. Calviello A. Hirsekorn S. de Pretis M. Pelizzola U. Ohler
February 02, 2017 / Cell Stem Cell A multi-step transcriptional and chromatin state cascade underlies motor neuron programming from embryonic stem cells S. Velasco M.M. Ibrahim A. Kakumanu G. Garipler B. Aydin M.A. Al-Sayegh A. Hirsekorn F. Abdul-Rahman R. Satija U. Ohler S. Mahony E.O. Mazzoni
January 01, 2016 / Methods Mol Biol Identifying RBP targets with RIP-seq H.H. Wessels A. Hirsekorn U. Ohler N. Mukherjee
February 01, 2016 / Nat Methods Detecting actively translated open reading frames in ribosome profiling data L. Calviello N. Mukherjee E. Wyler H. Zauber A. Hirsekorn M. Selbach M. Landthaler B. Obermayer U. Ohler
October 26, 2018 / Nat Commun Determinants of promoter and enhancer transcription directionality in metazoans M.M. Ibrahim A. Karabacak A. Glahs E. Kolundzic A. Hirsekorn A. Carda B. Tursun R.P. Zinzen S.A. Lacadie U. Ohler
February 21, 2019 / Genome Biol Reproducible inference of transcription factor footprints in ATAC-seq and DNase-seq datasets using protocol-specific bias modeling A. Karabacak Calviello A. Hirsekorn R. Wurmus D. Yusuf U. Ohler