Scientific Publications Search Search Author Impact Factor Release Date Research Group Search Sort by RelevanceFrom A-ZAuthored onDate/Time RangeRelease date Order AscDesc Akalin, Altuna Dr. (4) Beule, Dieter Dr. (1) Carvalho, Silvia Filipa (3) Diecke, Sebastian Dr. (1) Franke, Vedran Dr. (2) Gil, Marine (1) Gorski, Stan Dr. (1) Grosswendt, Stefanie Dr. (1) Harabula, Izabela-Cezara (4) Hirsekorn, Antje (1) Hübner, Norbert Prof. Dr. (1) Irastorza Azcarate, Ibai Dr. (5) Junker, Jan Philipp Prof. Dr. (1) Kocks, Christine Dr. (1) Krabbe, Grietje Dr. (1) Kukalev, Alexander Dr. (8) Lacadie, Scott Allen Dr. (1) Landthaler, Markus Prof. Dr. (1) Markowski, Julia (1) Meijer, Mandy Dr. (1) Merks, Anne Margarete Dr. (1) Ohler, Uwe Prof. Dr. (1) Panakova, Daniela Dr. (1) Pombo, Ana Prof. Dr. (93) Rajewsky, Nikolaus Prof. Dr. (2) Robson, Michael Dr. (1) Sander, Maike Prof. Dr. (1) Schwarz, Roland Dr. (1) Selbach, Matthias Prof. Dr. (1) Serebreni, Leonid Dr. (1) Stachel-Braum, Philipp Noah Tim (1) Szabo, Dominik (3) Thieme, Christoph Dr. (4) Vidal, Marie Dr. (1) Vucicevic, Dubravka (1) Willemin, Andréa (1) Winick-Ng, Warren Dr. (3) Wolf, Susanne Dr. (1) Wyler, Emanuel Dr. (1) Zea Redondo, Luna (4) (-) Kettenmann, Helmut Prof. Dr. (1) (-) Lupianez Garcia, Dario Jesus Dr. (1) 2016 (1) 2017 (1) 2018 (1) 2020 (1) 2021 (3) 2022 (2) 2023 (1) Advanced Light Microscopy (3) Anchored Signalling (7) Animal Phenotyping (1) Bioinformatics and Omics Data Science (3) Biology of Malignant Lymphomas (2) Cancer Genetics and Cellular Stress Responses (2) Cardiac MRI (4) Cellular Neurosciences (348) Chemical Biology (8) Computational Regulatory Genomics (1) Developmental Biology / Signal Transduction (2) Developmental Neurobiology (2) (-) Epigenetic Regulation and Chromatin Architecture (10) Experimental Ultrahigh-Field MR (25) Genetics and Genomics of Cardiovascular Diseases (57) Genetics of Congenital Heart Disease (1) Genome Engineering & Disease Models (2) Genomics (3) Immune Regulation and Cancer (1) Integrative Vascular Biology (1) Intracellular Proteolysis (1) Magnetic Resonance (25) Mathematical Cell Physiology (5) Microenvironmental Regulation in Autoimmunity and Cancer (11) Mobile DNA (1) Molecular Biology of Peptide Hormones (5) Molecular Cardiovascular Research (1) Molecular Genetics of Chronic Inflammation and Allergic Disease (4) Molecular Immunology and Gene Therapy (1) Molecular Physiology of Somatic Sensation (5) Myology (2) Nephrology and Inflammatory Vascular Diseases (2) Neural Circuits and Behaviour (1) Neuroimmunology Laboratory (2) Organoids (1) Out-patient Clinic for Neuroimmunology (1) Pluripotent Stem Cells (2) Protein Production and Characterization (3) Proteome Dynamics (2) Proteomics (12) Proteomics and Metabolomics (1) Proteomics and Molecular Mechanisms of Neurodegenerative Diseases (3) Psychoneuroimmunology (28) Quantitative Developmental Biology (3) RNA Biology and Posttranscriptional Regulation (5) Screening Unit (8) Structural Biology of Membrane-Associated Processes (3) Systems Biology of Gene Regulatory Elements (2) Transgenics (2) Translational Bioinformatics (5) Translational Cardiology and Functional Genomics (3) Translational Oncology of Solid Tumors (2) Translational Tumorimmunology (6) 10 Results: Active Filter: Kettenmann, Helmut Prof. Dr.Lupianez Garcia, Dario Jesus Dr.Epigenetic Regulation and Chromatin Architecture Sort: Result score Newest to oldest Oldest to newest October 20, 2022 / bioRxiv 3D genome topologies distinguish pluripotent epiblast and primitive endoderm cells in the mouse blastocyst G. Loof D. Szabo V. Garg A. Kukalev L. Zea-Redondo R. Kempfer T.M. Sparks Yi. Zhang C.J. Thieme S. Carvalho A. Weise M. Balachandran T. Liehr L.R. Welch A.K. Hadjantonakis A. Pombo May, 2018 / Nat Genet Polymer physics predicts the effects of structural variants on chromatin architecture S. Bianco D.G. Lupiáñez A.M. Chiariello C. Annunziatella K. Kraft R. Schöpflin L. Wittler G. Andrey M. Vingron A. Pombo S. Mundlos M. Nicodemi October 13, 2016 / Nature Formation of new chromatin domains determines pathogenicity of genomic duplications M. Franke D.M. Ibrahim G. Andrey W. Schwarzer V. Heinrich R. Schoepflin K. Kraft R. Kempfer I. Jerkovic W.L. Chan M. Spielmann B. Timmermann L. Wittler I. Kurth P. Cambiaso O. Zuffardi G. Houge L. Lambie F. Brancati A. Pombo M. Vingron F. Spitz S. Mundlos May 09, 2017 / Transl Psychiatr Maternal immune activation results in complex microglial transcriptome signature in the adult offspring that is reversed by minocycline treatment D. Mattei A. Ivanov C. Ferrai P. Jordan D. Guneykaya A. Buonfiglioli W. Schaafsma P. Przanowski W. Deuther-Conrad P. Brust S. Hesse M. Patt O. Sabri T.L. Ross B.J.L. Eggen E.W.G.M. Boddeke B. Kaminska D. Beule A. Pombo H. Kettenmann S.A. Wolf April, 2020 / Nat Rev Genet Methods for mapping 3D chromosome architecture R. Kempfer A. Pombo October 01, 2021 / Bioinformatics GAMIBHEAR: whole-genome haplotype reconstruction from Genome Architecture Mapping data J. Markowski R. Kempfer A. Kukalev I. Irastorza-Azcarate G. Loof B. Kehr A. Pombo S. Rahmann R.F. Schwarz May, 2021 / Nat Methods Comparison of the Hi-C, GAM and SPRITE methods using polymer models of chromatin L. Fiorillo F. Musella M. Conte R. Kempfer A.M. Chiariello S. Bianco A. Kukalev I. Irastorza-Azcarate A. Esposito A. Abraham A. Prisco A. Pombo M. Nicodemi January 13, 2022 / Cell Genom Single-cell-resolved dynamics of chromatin architecture delineate cell and regulatory states in zebrafish embryos A.C. McGarvey W. Kopp D. Vučićević K. Mattonet R. Kempfer A. Hirsekorn I. Bilić M. Gil A. Trinks A.M. Merks D. Panáková A. Pombo A. Akalin J.P. Junker D.Y.R. Stainier D. Garfield U. Ohler S.A. Lacadie July, 2023 / Nat Methods Multiplex-GAM: genome-wide identification of chromatin contacts yields insights overlooked by Hi-C R.A. Beagrie C.J. Thieme C. Annunziatella C. Baugher Y. Zhang M. Schueler A. Kukalev R. Kempfer A.M. Chiariello S. Bianco Y. Li T. Davis A. Scialdone L.R. Welch M. Nicodemi A. Pombo November 25, 2021 / Nature Cell-type specialization is encoded by specific chromatin topologies W. Winick-Ng A. Kukalev I. Harabula L. Zea-Redondo D. Szabó M. Meijer L. Serebreni Y. Zhang S. Bianco A.M. Chiariello I. Irastorza-Azcarate C.J. Thieme T.M. Sparks S. Carvalho L. Fiorillo F. Musella E. Irani E.T. Triglia A.A. Kolodziejczyk A. Abentung G. Apostolova E.J. Paul V. Franke R. Kempfer A. Akalin S.A. Teichmann G. Dechant M.A. Ungless M. Nicodemi L. Welch G. Castelo-Branco A. Pombo
October 20, 2022 / bioRxiv 3D genome topologies distinguish pluripotent epiblast and primitive endoderm cells in the mouse blastocyst G. Loof D. Szabo V. Garg A. Kukalev L. Zea-Redondo R. Kempfer T.M. Sparks Yi. Zhang C.J. Thieme S. Carvalho A. Weise M. Balachandran T. Liehr L.R. Welch A.K. Hadjantonakis A. Pombo
May, 2018 / Nat Genet Polymer physics predicts the effects of structural variants on chromatin architecture S. Bianco D.G. Lupiáñez A.M. Chiariello C. Annunziatella K. Kraft R. Schöpflin L. Wittler G. Andrey M. Vingron A. Pombo S. Mundlos M. Nicodemi
October 13, 2016 / Nature Formation of new chromatin domains determines pathogenicity of genomic duplications M. Franke D.M. Ibrahim G. Andrey W. Schwarzer V. Heinrich R. Schoepflin K. Kraft R. Kempfer I. Jerkovic W.L. Chan M. Spielmann B. Timmermann L. Wittler I. Kurth P. Cambiaso O. Zuffardi G. Houge L. Lambie F. Brancati A. Pombo M. Vingron F. Spitz S. Mundlos
May 09, 2017 / Transl Psychiatr Maternal immune activation results in complex microglial transcriptome signature in the adult offspring that is reversed by minocycline treatment D. Mattei A. Ivanov C. Ferrai P. Jordan D. Guneykaya A. Buonfiglioli W. Schaafsma P. Przanowski W. Deuther-Conrad P. Brust S. Hesse M. Patt O. Sabri T.L. Ross B.J.L. Eggen E.W.G.M. Boddeke B. Kaminska D. Beule A. Pombo H. Kettenmann S.A. Wolf
October 01, 2021 / Bioinformatics GAMIBHEAR: whole-genome haplotype reconstruction from Genome Architecture Mapping data J. Markowski R. Kempfer A. Kukalev I. Irastorza-Azcarate G. Loof B. Kehr A. Pombo S. Rahmann R.F. Schwarz
May, 2021 / Nat Methods Comparison of the Hi-C, GAM and SPRITE methods using polymer models of chromatin L. Fiorillo F. Musella M. Conte R. Kempfer A.M. Chiariello S. Bianco A. Kukalev I. Irastorza-Azcarate A. Esposito A. Abraham A. Prisco A. Pombo M. Nicodemi
January 13, 2022 / Cell Genom Single-cell-resolved dynamics of chromatin architecture delineate cell and regulatory states in zebrafish embryos A.C. McGarvey W. Kopp D. Vučićević K. Mattonet R. Kempfer A. Hirsekorn I. Bilić M. Gil A. Trinks A.M. Merks D. Panáková A. Pombo A. Akalin J.P. Junker D.Y.R. Stainier D. Garfield U. Ohler S.A. Lacadie
July, 2023 / Nat Methods Multiplex-GAM: genome-wide identification of chromatin contacts yields insights overlooked by Hi-C R.A. Beagrie C.J. Thieme C. Annunziatella C. Baugher Y. Zhang M. Schueler A. Kukalev R. Kempfer A.M. Chiariello S. Bianco Y. Li T. Davis A. Scialdone L.R. Welch M. Nicodemi A. Pombo
November 25, 2021 / Nature Cell-type specialization is encoded by specific chromatin topologies W. Winick-Ng A. Kukalev I. Harabula L. Zea-Redondo D. Szabó M. Meijer L. Serebreni Y. Zhang S. Bianco A.M. Chiariello I. Irastorza-Azcarate C.J. Thieme T.M. Sparks S. Carvalho L. Fiorillo F. Musella E. Irani E.T. Triglia A.A. Kolodziejczyk A. Abentung G. Apostolova E.J. Paul V. Franke R. Kempfer A. Akalin S.A. Teichmann G. Dechant M.A. Ungless M. Nicodemi L. Welch G. Castelo-Branco A. Pombo