Scientific Publications Search Search Author Impact Factor Release Date Research Group Search Sort by RelevanceFrom A-ZAuthored onDate/Time RangeRelease date Order AscDesc Adami, Eleonora Dr. (1) Akalin, Altuna Dr. (9) Beule, Dieter Dr. (2) Birchmeier-Kohler, Carmen Prof. Dr. (1) Blachut, Susanne (1) Burkert, Christian Martin (1) Chekulaeva, Marina Dr. (1) Chen, Chia-Yu (1) Diecke, Sebastian Dr. (2) Franke, Vedran Dr. (1) Ghanbari, Mahsa Dr. (5) Gil, Marine (1) Gotthardt, Michael Prof. Dr. (2) Henssen, Anton Prof. Dr. med. (1) Hirsekorn, Antje (12) Hübner, Norbert Prof. Dr. (2) Hummel, Oliver (1) Junker, Jan Philipp Prof. Dr. (2) Kaufmann, Tom (1) Kempa, Stefan Dr. (1) Kirchner, Marieluise Dr. (1) Lacadie, Scott Allen Dr. (10) Landthaler, Markus Prof. Dr. (10) Lindberg, Eric Lars-Helge (1) Maatz, Henrike Dr. (1) Mastrobuoni, Guido Dr. (1) Merks, Anne Margarete Dr. (1) Mertins, Philipp Dr. (1) Mintcheva, Janita (1) Monti, Remo (3) Müller, Thomas Dr. (1) Müthel, Stefanie (1) Neuschulz, Anika (1) Obermayer-Wasserscheid, Benedikt Dr. (3) Ofenbauer, Andreas Dr. (1) Panakova, Daniela Dr. (1) Patone, Giannino Dr. (1) Pombo, Ana Prof. Dr. (1) Preibisch, Stephan Dr. (1) Rajewsky, Nikolaus Prof. Dr. (5) Rautenstrauch, Pia Josefine (2) Röefzaad, Claudia (1) Ruiz Orera, Jorge Dr. (1) Sander, Maike Prof. Dr. (1) Schwarz, Roland Dr. (2) Selbach, Matthias Prof. Dr. (9) Spanjaard, Bastiaan Dr. (1) Sprink, Thiemo Dr. (1) Streck, Adam Dr. (1) Tursun, Baris Dr. (2) Uyar, Bora Dr. (2) Villamil, Gabriel (1) Vucicevic, Dubravka (3) Woehler, Andrew Dr. (1) Wurmus, Ricardo (3) Wyler, Emanuel Dr. (3) Zauber, Henrik Dr. (2) Zinzen, Robert Patrick Dr. (3) (-) Ohler, Uwe Prof. Dr. (138) 1999 (2) 2000 (3) 2001 (2) 2002 (1) 2004 (2) 2005 (1) 2006 (6) 2007 (5) 2008 (1) 2009 (4) 2010 (9) 2011 (7) 2012 (10) 2013 (8) 2014 (6) 2015 (5) 2016 (7) 2017 (13) 2018 (7) 2019 (5) 2020 (8) 2021 (6) 2022 (14) 2023 (5) 2024 (1) Bioinformatics and Omics Data Science (10) Bioinformatics of RNA Structure and Transcriptome Regulation (1) (-) Computational Regulatory Genomics (138) Developmental Biology / Signal Transduction (1) Epigenetic Regulation and Chromatin Architecture (1) Genetics and Genomics of Cardiovascular Diseases (2) Non-coding RNAs and Mechanisms of Cytoplasmic Gene Regulation (1) Pancreatic Organoid Research and Disease Modeling (1) Pluripotent Stem Cells (1) Proteome Dynamics (11) Proteomics (1) Quantitative Developmental Biology (3) RNA Biology and Posttranscriptional Regulation (10) Systems Biology Imaging (1) Systems Biology of Gene Regulatory Elements (4) Translational Bioinformatics (1) Translational Cardiology and Functional Genomics (2) 138 Results: Active Filter: Ohler, Uwe Prof. Dr.Computational Regulatory Genomics Sort: Result score Newest to oldest Oldest to newest September 12, 2022 / Genome Biol Control of immediate early gene expression by CPEB4-repressor complex-mediated mRNA degradation F. Poetz S. Lebedeva J. Schott D. Lindner U. Ohler G. Stoecklin December 16, 2022 / STAR Protoc Protocol for fast scRNA-seq raw data processing using scKB and non-arbitrary quality control with COPILOT C.W. Hsu R. Shahan T.M. Nolan P.N. Benfey U. Ohler August 01, 2020 / Nat Struct Mol Biol Quantification of translation uncovers the functions of the alternative transcriptome L. Calviello A. Hirsekorn U. Ohler July 13, 2020 / Nat Commun Deep learning for genomics using Janggu W. Kopp R. Monti A. Tamburrini U. Ohler A. Akalin July 01, 2022 / Nat Genet Multiomic atlas with functional stratification and developmental dynamics of zebrafish cis-regulatory elements D. Baranasic M. Hörtenhuber P.J. Balwierz T. Zehnder A.K. Mukarram C. Nepal C. Várnai Y. Hadzhiev A. Jimenez-Gonzalez N. Li J. Wragg F.M. D'Orazio D. Relic M. Pachkov N. Díaz B. Hernández-Rodríguez Z. Chen M. Stoiber M. Dong I. Stevens S.E. Ross A. Eagle R. Martin O. Obasaju S. Rastegar A.C. McGarvey W. Kopp E. Chambers D. Wang H.R. Kim R.D. Acemel S. Naranjo M. Łapiński V. Chong S. Mathavan B. Peers T. Sauka-Spengler M. Vingron P. Carninci U. Ohler S.A. Lacadie S.M. Burgess C. Winata F. van Eeden J.M. Vaquerizas J.L. Gómez-Skarmeta D. Onichtchouk B.J. Brown O. Bogdanovic E. van Nimwegen M. Westerfield F.C Wardle C.O. Daub B. Lenhard F. Müller July 01, 2022 / Nat Biotechnol Standardized annotation of translated open reading frames J.M. Mudge J. Ruiz-Orera J.R. Prensner M.A. Brunet F. Calvet I. Jungreis Jo.M. Gonzalez M. Magrane T.F. Martinez J.F. Schulz Y.T. Yang M.M. Albà J.L. Aspden P.V. Baranov A.A. Bazzini E. Bruford M.J. Martin L. Calviello A.R. Carvunis J. Chen J.P. Couso E.W. Deutsch P. Flicek A. Frankish M. Gerstein N. Hubner N.T. Ingolia M. Kellis G. Menschaert R.L. Moritz U. Ohler X. Roucou A. Saghatelian J.S. Weissman S. van Heesch March 01, 2023 / NAR Genom Bioinform A computational map of the human-SARS-CoV-2 protein-RNA interactome predicted at single-nucleotide resolution M. Horlacher S. Oleshko Y. Hu M. Ghanbari G. Cantini P. Schinke E.E. Vergara F. Bittner N.S Mueller U. Ohler L. Moyon A. Marsico September 10, 2022 / Nat Commun Identifying interpretable gene-biomarker associations with functionally informed kernel-based tests in 190,000 exomes R. Monti P. Rautenstrauch M. Ghanbari A.R. James M. Kirchler U. Ohler S. Konigorski C. Lippert March 31, 2023 / Science Brassinosteroid gene regulatory networks at cellular resolution in the Arabidopsis root T.M. Nolan N. Vukašinović C.W. Hsu J. Zhang I. Vanhoutte R. Shahan I.W. Taylor L. Greenstreet M. Heitz A. Afanassiev P. Wang P. Szekely A. Brosnan Y. Yin G. Schiebinger U. Ohler E. Russinova P.N. Benfey January 01, 2017 / Latest Thinking How are different transcripts in our genome translated into proteins? U. Ohler Pagination Current page 1 Page 2 Page 3 Page 4 … Next page Next › Last page Last »
September 12, 2022 / Genome Biol Control of immediate early gene expression by CPEB4-repressor complex-mediated mRNA degradation F. Poetz S. Lebedeva J. Schott D. Lindner U. Ohler G. Stoecklin
December 16, 2022 / STAR Protoc Protocol for fast scRNA-seq raw data processing using scKB and non-arbitrary quality control with COPILOT C.W. Hsu R. Shahan T.M. Nolan P.N. Benfey U. Ohler
August 01, 2020 / Nat Struct Mol Biol Quantification of translation uncovers the functions of the alternative transcriptome L. Calviello A. Hirsekorn U. Ohler
July 13, 2020 / Nat Commun Deep learning for genomics using Janggu W. Kopp R. Monti A. Tamburrini U. Ohler A. Akalin
July 01, 2022 / Nat Genet Multiomic atlas with functional stratification and developmental dynamics of zebrafish cis-regulatory elements D. Baranasic M. Hörtenhuber P.J. Balwierz T. Zehnder A.K. Mukarram C. Nepal C. Várnai Y. Hadzhiev A. Jimenez-Gonzalez N. Li J. Wragg F.M. D'Orazio D. Relic M. Pachkov N. Díaz B. Hernández-Rodríguez Z. Chen M. Stoiber M. Dong I. Stevens S.E. Ross A. Eagle R. Martin O. Obasaju S. Rastegar A.C. McGarvey W. Kopp E. Chambers D. Wang H.R. Kim R.D. Acemel S. Naranjo M. Łapiński V. Chong S. Mathavan B. Peers T. Sauka-Spengler M. Vingron P. Carninci U. Ohler S.A. Lacadie S.M. Burgess C. Winata F. van Eeden J.M. Vaquerizas J.L. Gómez-Skarmeta D. Onichtchouk B.J. Brown O. Bogdanovic E. van Nimwegen M. Westerfield F.C Wardle C.O. Daub B. Lenhard F. Müller
July 01, 2022 / Nat Biotechnol Standardized annotation of translated open reading frames J.M. Mudge J. Ruiz-Orera J.R. Prensner M.A. Brunet F. Calvet I. Jungreis Jo.M. Gonzalez M. Magrane T.F. Martinez J.F. Schulz Y.T. Yang M.M. Albà J.L. Aspden P.V. Baranov A.A. Bazzini E. Bruford M.J. Martin L. Calviello A.R. Carvunis J. Chen J.P. Couso E.W. Deutsch P. Flicek A. Frankish M. Gerstein N. Hubner N.T. Ingolia M. Kellis G. Menschaert R.L. Moritz U. Ohler X. Roucou A. Saghatelian J.S. Weissman S. van Heesch
March 01, 2023 / NAR Genom Bioinform A computational map of the human-SARS-CoV-2 protein-RNA interactome predicted at single-nucleotide resolution M. Horlacher S. Oleshko Y. Hu M. Ghanbari G. Cantini P. Schinke E.E. Vergara F. Bittner N.S Mueller U. Ohler L. Moyon A. Marsico
September 10, 2022 / Nat Commun Identifying interpretable gene-biomarker associations with functionally informed kernel-based tests in 190,000 exomes R. Monti P. Rautenstrauch M. Ghanbari A.R. James M. Kirchler U. Ohler S. Konigorski C. Lippert
March 31, 2023 / Science Brassinosteroid gene regulatory networks at cellular resolution in the Arabidopsis root T.M. Nolan N. Vukašinović C.W. Hsu J. Zhang I. Vanhoutte R. Shahan I.W. Taylor L. Greenstreet M. Heitz A. Afanassiev P. Wang P. Szekely A. Brosnan Y. Yin G. Schiebinger U. Ohler E. Russinova P.N. Benfey
January 01, 2017 / Latest Thinking How are different transcripts in our genome translated into proteins? U. Ohler