Scientific Publications Search Search Author Impact Factor Release Date Research Group Search Sort by RelevanceFrom A-ZAuthored onDate/Time RangeRelease date Order AscDesc Akalin, Altuna Dr. (4) Beule, Dieter Dr. (1) Carvalho, Silvia Filipa (3) Diecke, Sebastian Dr. (1) Franke, Vedran Dr. (2) Gil, Marine (1) Gorski, Stan Dr. (1) Grosswendt, Stefanie Dr. (1) Harabula, Izabela-Cezara (4) Hirsekorn, Antje (1) Hübner, Norbert Prof. Dr. (1) Irastorza Azcarate, Ibai Dr. (5) Junker, Jan Philipp Prof. Dr. (1) Kettenmann, Helmut Prof. Dr. (1) Kocks, Christine Dr. (1) Krabbe, Grietje Dr. (1) Lacadie, Scott Allen Dr. (1) Landthaler, Markus Prof. Dr. (1) Lupianez Garcia, Dario Jesus Dr. (1) Markowski, Julia (1) Meijer, Mandy Dr. (1) Merks, Anne Margarete Dr. (1) Ohler, Uwe Prof. Dr. (1) Panakova, Daniela Dr. (1) Pombo, Ana Prof. Dr. (93) Rajewsky, Nikolaus Prof. Dr. (2) Robson, Michael Dr. (1) Sander, Maike Prof. Dr. (1) Schwarz, Roland Dr. (1) Selbach, Matthias Prof. Dr. (1) Serebreni, Leonid Dr. (1) Stachel-Braum, Philipp Noah Tim (1) Szabo, Dominik (3) Thieme, Christoph Dr. (4) Vidal, Marie Dr. (1) Vucicevic, Dubravka (1) Willemin, Andréa (1) Winick-Ng, Warren Dr. (3) Wolf, Susanne Dr. (1) Wyler, Emanuel Dr. (1) Zea Redondo, Luna (4) (-) Kukalev, Alexander Dr. (8) 2015 (1) 2017 (1) 2021 (3) 2022 (1) 2023 (1) 2024 (1) Advanced Light Microscopy (1) AG Müller/Dechend (ECRC) (17) AG Schreiber [ECRC] (1) Anchored Signalling (2) Animal Phenotyping (3) Biobank (1) Bioinformatics and Omics Data Science (6) Cellular Neurosciences (8) Chemical Biology (1) Clinical Research Unit (1) Computational Regulatory Genomics (1) Developmental Biology / Signal Transduction (1) (-) Epigenetic Regulation and Chromatin Architecture (8) Experimental Ultrahigh-Field MR (1) From Cell States to Function (2) Genetics and Genomics of Cardiovascular Diseases (3) Genome Engineering & Disease Models (5) Genomics (1) Host-microbiome factors in cardiovascular disease (2) Hypertension-caused End-Organ Damage (17) Hypertension-Mediated End-Organ Damage (17) Immune Mechanisms and Human Antibodies (8) Immune Regulation and Cancer (3) Integrative Vascular Biology (3) Magnetic Resonance (1) Mathematical Cell Physiology (1) Microenvironmental Regulation in Autoimmunity and Cancer (7) Mobile DNA (4) Molecular Biology of Peptide Hormones (6) Molecular Cardiovascular Research (3) Molecular Epidemiology (1) Molecular Immunology and Gene Therapy (3) Nephrology and Inflammatory Vascular Diseases (10) Out-patient Clinic for Neuroimmunology (1) Pluripotent Stem Cells (3) Proteome Dynamics (2) Proteomics (3) Proteomics and Molecular Mechanisms of Neurodegenerative Diseases (1) Psychoneuroimmunology (7) RNA Biology and Posttranscriptional Regulation (2) Screening Unit (1) Systems Biology of Gene Regulatory Elements (5) Transgenics (5) Translational Bioinformatics (3) Translational Tumorimmunology (3) 8 Results: Active Filter: Kukalev, Alexander Dr.Epigenetic Regulation and Chromatin Architecture Sort: Result score Newest to oldest Oldest to newest October 20, 2022 / bioRxiv 3D genome topologies distinguish pluripotent epiblast and primitive endoderm cells in the mouse blastocyst G. Loof D. Szabo V. Garg A. Kukalev L. Zea-Redondo R. Kempfer T.M. Sparks Yi. Zhang C.J. Thieme S. Carvalho A. Weise M. Balachandran T. Liehr L.R. Welch A.K. Hadjantonakis A. Pombo December 19, 2015 / eLife Methylation of RNA polymerase II non-consensus Lysine residues marks early transcription in mammalian cells J.D. Dias T. Rito E. Torlai Triglia A. Kukalev C. Ferrai M. Chotalia E. Brookes H. Kimura A. Pombo October 16, 2017 / Mol Syst Biol RNA polymerase II primes Polycomb-repressed developmental genes throughout terminal neuronal differentiation C. Ferrai E. Torlai Triglia J.R. Risner-Janiczek T. Rito O.J.L. Rackham I. De Santiago A. Kukalev M. Nicodemi A. Akalin M. Li M.A. Ungless A. Pombo April, 2024 / Biol Open SRRM2 splicing factor modulates cell fate in early development S. Carvalho L. Zea-Redondo T.C.C. Tang P. Stachel-Braum D. Miller P. Caldas A. Kukalev S. Diecke S. Grosswendt A.R. Grosso A. Pombo October 01, 2021 / Bioinformatics GAMIBHEAR: whole-genome haplotype reconstruction from Genome Architecture Mapping data J. Markowski R. Kempfer A. Kukalev I. Irastorza-Azcarate G. Loof B. Kehr A. Pombo S. Rahmann R.F. Schwarz May, 2021 / Nat Methods Comparison of the Hi-C, GAM and SPRITE methods using polymer models of chromatin L. Fiorillo F. Musella M. Conte R. Kempfer A.M. Chiariello S. Bianco A. Kukalev I. Irastorza-Azcarate A. Esposito A. Abraham A. Prisco A. Pombo M. Nicodemi July, 2023 / Nat Methods Multiplex-GAM: genome-wide identification of chromatin contacts yields insights overlooked by Hi-C R.A. Beagrie C.J. Thieme C. Annunziatella C. Baugher Y. Zhang M. Schueler A. Kukalev R. Kempfer A.M. Chiariello S. Bianco Y. Li T. Davis A. Scialdone L.R. Welch M. Nicodemi A. Pombo November 25, 2021 / Nature Cell-type specialization is encoded by specific chromatin topologies W. Winick-Ng A. Kukalev I. Harabula L. Zea-Redondo D. Szabó M. Meijer L. Serebreni Y. Zhang S. Bianco A.M. Chiariello I. Irastorza-Azcarate C.J. Thieme T.M. Sparks S. Carvalho L. Fiorillo F. Musella E. Irani E.T. Triglia A.A. Kolodziejczyk A. Abentung G. Apostolova E.J. Paul V. Franke R. Kempfer A. Akalin S.A. Teichmann G. Dechant M.A. Ungless M. Nicodemi L. Welch G. Castelo-Branco A. Pombo
October 20, 2022 / bioRxiv 3D genome topologies distinguish pluripotent epiblast and primitive endoderm cells in the mouse blastocyst G. Loof D. Szabo V. Garg A. Kukalev L. Zea-Redondo R. Kempfer T.M. Sparks Yi. Zhang C.J. Thieme S. Carvalho A. Weise M. Balachandran T. Liehr L.R. Welch A.K. Hadjantonakis A. Pombo
December 19, 2015 / eLife Methylation of RNA polymerase II non-consensus Lysine residues marks early transcription in mammalian cells J.D. Dias T. Rito E. Torlai Triglia A. Kukalev C. Ferrai M. Chotalia E. Brookes H. Kimura A. Pombo
October 16, 2017 / Mol Syst Biol RNA polymerase II primes Polycomb-repressed developmental genes throughout terminal neuronal differentiation C. Ferrai E. Torlai Triglia J.R. Risner-Janiczek T. Rito O.J.L. Rackham I. De Santiago A. Kukalev M. Nicodemi A. Akalin M. Li M.A. Ungless A. Pombo
April, 2024 / Biol Open SRRM2 splicing factor modulates cell fate in early development S. Carvalho L. Zea-Redondo T.C.C. Tang P. Stachel-Braum D. Miller P. Caldas A. Kukalev S. Diecke S. Grosswendt A.R. Grosso A. Pombo
October 01, 2021 / Bioinformatics GAMIBHEAR: whole-genome haplotype reconstruction from Genome Architecture Mapping data J. Markowski R. Kempfer A. Kukalev I. Irastorza-Azcarate G. Loof B. Kehr A. Pombo S. Rahmann R.F. Schwarz
May, 2021 / Nat Methods Comparison of the Hi-C, GAM and SPRITE methods using polymer models of chromatin L. Fiorillo F. Musella M. Conte R. Kempfer A.M. Chiariello S. Bianco A. Kukalev I. Irastorza-Azcarate A. Esposito A. Abraham A. Prisco A. Pombo M. Nicodemi
July, 2023 / Nat Methods Multiplex-GAM: genome-wide identification of chromatin contacts yields insights overlooked by Hi-C R.A. Beagrie C.J. Thieme C. Annunziatella C. Baugher Y. Zhang M. Schueler A. Kukalev R. Kempfer A.M. Chiariello S. Bianco Y. Li T. Davis A. Scialdone L.R. Welch M. Nicodemi A. Pombo
November 25, 2021 / Nature Cell-type specialization is encoded by specific chromatin topologies W. Winick-Ng A. Kukalev I. Harabula L. Zea-Redondo D. Szabó M. Meijer L. Serebreni Y. Zhang S. Bianco A.M. Chiariello I. Irastorza-Azcarate C.J. Thieme T.M. Sparks S. Carvalho L. Fiorillo F. Musella E. Irani E.T. Triglia A.A. Kolodziejczyk A. Abentung G. Apostolova E.J. Paul V. Franke R. Kempfer A. Akalin S.A. Teichmann G. Dechant M.A. Ungless M. Nicodemi L. Welch G. Castelo-Branco A. Pombo