Scientific Publications Search Search Author Impact Factor Release Date Research Group Search Sort by RelevanceFrom A-ZAuthored onDate/Time RangeRelease date Order AscDesc Adami, Eleonora Dr. (3) Aigner, Denise (1) Akalin, Altuna Dr. (8) Altmueller, Janine Dr.med. (2) Bahry, Ella Dr. (1) Barke, Niclas (1) Berruezo Llacuna, Maria (1) Beule, Dieter Dr. (1) Birchmeier, Walter Prof. Dr. (1) Birchmeier-Kohler, Carmen Prof. Dr. (7) Blachut, Susanne (1) Blume, Alexander Dr. (1) Blüthgen, Nils (1) Borodina, Tatiana Dr. (1) Braeuning, Caroline (2) Cerda Jara, Cledi Alicia (4) Chekulaeva, Marina Dr. (3) Chen, Wei Prof. Dr. (13) Chu, Van Trung Dr. (1) Conrad, Thomas Dr. (1) Del Giudice, Simone (1) Deter, Aylina (1) Diecke, Sebastian Dr. (3) Di Virgilio, Michela Prof. Dr. (1) Dube, Giuliana Marie (1) Emmenegger, Lisa (2) Escobar Fernandez, Helena Dr. (1) Falcke, Martin Prof. Dr. (2) Faxel, Miriam (1) Franke, Vedran Dr. (5) Freimuth, Jonas (1) Fritsche, Raphaela Dr. (1) Gorski, Stan Dr. (1) Gotthardt, Michael Prof. Dr. (2) Graf, Robin Dr. (2) Grosswendt, Stefanie Dr. (4) Haghverdi, Laleh Dr. (1) Hartl, Kimberly (1) Heinemann, Udo Prof. Dr. (2) Henssen, Anton Prof. Dr. med. (1) Herzog, Margareta (6) Hinze, Christian Dr. med. Dipl.-Math. (4) Hollfinger, Irene (1) Hübner, Norbert Prof. Dr. (4) Hummel, Oliver (1) Junker, Jan Philipp Prof. Dr. (2) Jüttner, Rene Dr. (1) Kastelic, Nicolai (2) Kieshauer, Janine (1) Kirchner, Marieluise Dr. (4) Kirwan, Jennifer Dr. (1) Kocks, Christine Dr. (18) Krabbe, Grietje Dr. (1) Krüger, Christina (1) Kühn, Ralf Dr. (4) Kunz, Severine Dr. (1) Lahmann, Ines Dr. (1) Landthaler, Markus Prof. Dr. (20) León Perinán, Daniel (3) Lewin, Gary Prof. Dr. (1) Lindberg, Eric Lars-Helge (1) Lisowski, Pawel Dr. (3) Luft, Friedrich Prof. Dr. (1) Maatz, Henrike Dr. (2) Marg, Andreas Dr. (1) Mastrobuoni, Guido Dr. (8) Mertins, Philipp Dr. (2) Metzger, Jakob Johannes Dr. (1) Minia, Igor Dr. (1) Müller, Thomas Dr. (2) Neuendorf, Nancy (1) Neuschulz, Anika (1) Obermayer-Wasserscheid, Benedikt Dr. (9) Ohler, Uwe Prof. Dr. (4) Oliveras Martinez, Anna Dr. (4) Otto, Maximilian (1) Patone, Giannino Dr. (1) Pombo, Ana Prof. Dr. (1) Preibisch, Stephan Dr. (2) Prigione, Alessandro Prof. Dr. (3) Quedenau, Claudia (1) Radke, Michael Dr. (1) Rahn, Hans-Peter Dr. (2) Rajewsky, Klaus Prof. Dr. (6) Rajewsky, Nikolaus Prof. Dr. (168) Roth, Philipp (1) Rybak-Wolf, Agnieszka Dr. (22) Schott, Lena Marie (1) Schütz, Anja Dr. (1) Selbach, Matthias Prof. Dr. (8) Sigal, Michael Dr. (1) Spuler, Simone Prof. (1) Telugu, Narasimha Swamy Dr. (1) Trajkovski, Sarah (1) Uyar, Bora Dr. (3) Vidal, Marie Dr. (1) Wandres, Miriam (1) Wanker, Erich Prof. Dr. (2) Willnow, Thomas Prof. Dr. (1) Woehler, Andrew Dr. (8) Wolf, Susanne Dr. (1) Wurmus, Ricardo (5) Wyler, Emanuel Dr. (10) Zampieri, Niccolo Dr. (1) Zauber, Henrik Dr. (1) Zinzen, Robert Patrick Dr. (4) Zywitza, Vera Dr. (3) (-) Kempa, Stefan Dr. (8) 2011 (2) 2012 (1) 2013 (1) 2015 (1) 2019 (1) 2022 (1) 2023 (1) Advanced Light Microscopy (1) AG Müller/Dechend (ECRC) (11) Anchored Signalling (2) Bioinformatics and Omics Data Science (3) Biology of Malignant Lymphomas (1) Cancer Genetics and Cellular Stress Responses (1) Cellular Neurosciences (4) Clinical Research Unit (1) Computational Regulatory Genomics (1) Developmental Biology / Signal Transduction (2) Electron Microscopy (1) Flow Cytometry (2) Genetics and Genomics of Cardiovascular Diseases (6) Genome Diversification & Integrity (1) Genome Engineering & Disease Models (2) Host-microbiome factors in cardiovascular disease (6) Hypertension-caused End-Organ Damage (11) Hypertension-Mediated End-Organ Damage (11) Immune Regulation and Cancer (5) Integrative Vascular Biology (1) Intracellular Proteolysis (2) Mathematical Modelling of Cellular Processes (3) Mechanism-based Cancer Therapies (3) Mobile DNA (16) Molecular and cellular basis of behavio (1) Molecular Biology of Peptide Hormones (1) Molecular Cardiovascular Research (5) Molecular Immunology and Gene Therapy (3) Molecular Oncology (1) Molecular Pathways in Cortical Development (1) Molecular Physiology of Somatic Sensation (6) Myology (5) Organoids (2) Pluripotent Stem Cells (1) Protein Production and Characterization (1) Proteome Dynamics (7) Proteomics (35) Proteomics and Metabolomics (95) Proteomics and Molecular Mechanisms of Neurodegenerative Diseases (4) Psychoneuroimmunology (3) RNA Biology and Posttranscriptional Regulation (7) Structural Biology of Membrane-Associated Processes (1) Synaptic Transmission and Plasticity (1) Systems Biology Imaging (2) (-) Systems Biology of Gene Regulatory Elements (8) Systems Hematology, Stem Cells & Precision Medicine (1) Transgenics (2) Translational Bioinformatics (5) Translational Cardiology and Functional Genomics (2) Translational Oncology of Solid Tumors (4) Tumor heterogeneity and treatment resistance in pediatric cancer (1) 8 Results: Active Filter: Kempa, Stefan Dr.Systems Biology of Gene Regulatory Elements Sort: Result score Newest to oldest Oldest to newest February 09, 2022 / bioRxiv Spatio-temporal, optogenetic control of gene expression in organoids I. Legnini L. Emmenegger A. Zappulo R. Wurmus A. Oliveras Martinez C. Cerda Jara A. Boltengagen T. Hessler G. Mastrobuoni A. Rybak-Wolf S. Kempa R.P. Zinzen A. Woehler N. Rajewsky September 14, 2015 / Genome Biol Extensive identification and analysis of conserved small ORFs in animals S.D. Mackowiak H. Zauber C. Bielow D. Thiel K. Kutz L. Calviello G. Mastrobuoni N. Rajewsky S. Kempa M. Selbach B. Obermayer July, 2011 / Genome Res De novo assembly and validation of planaria transcriptome by massive parallel sequencing and shotgun proteomics C. Adamidi Y. Wang D. Gruen G. Mastrobuoni X. You D. Tolle M. Dodt S.D. Mackowiak A. Gogol-Doering P. Oenal A. Rybak E. Ross A.S. Alvarado S. Kempa C. Dieterich N. Rajewsky W. Chen December 09, 2011 / Mol Cell In vivo and transcriptome-wide identification of RNA binding protein target sites A.C. Jungkamp M. Stoeckius D. Mecenas D. Gruen G. Mastrobuoni S. Kempa N. Rajewsky April 27, 2012 / EMBO J Gene expression of pluripotency determinants is conserved between mammalian and planarian stem cells P. Onal D. Gruen C. Adamidi A. Rybak J. Solana G. Mastrobuoni Y. Wang H.P. Rahn W. Chen S. Kempa U. Ziebold N. Rajewsky July 01, 2013 / RNA Biol Identification of LIN28B-bound mRNAs reveals features of target recognition and regulation R. Graf M. Munschauer G. Mastrobuoni F. Mayr U. Heinemann S. Kempa N. Rajewsky M. Landthaler November 07, 2019 / Genes Dev Context-specific regulation of cell survival by a miRNA-controlled BIM rheostat V. Labi S. Peng F. Klironomos M. Munschauer N. Kastelic T. Chakraborty K. Schoeler E. Derudder M. Martella G. Mastrobuoni L.R. Hernandez-Miranda I. Lahmann C. Kocks C. Birchmeier S. Kempa L. Quintanilla-Martinez de Fend M. Landthaler N. Rajewsky K. Rajewsky October, 2023 / Nat Methods Spatiotemporal, optogenetic control of gene expression in organoids I. Legnini L. Emmenegger A. Zappulo A. Rybak-Wolf R. Wurmus A. Oliveras Martinez C. Cerda Jara A. Boltengagen T. Hessler G. Mastrobuoni S. Kempa R. Zinzen A. Woehler N. Rajewsky
February 09, 2022 / bioRxiv Spatio-temporal, optogenetic control of gene expression in organoids I. Legnini L. Emmenegger A. Zappulo R. Wurmus A. Oliveras Martinez C. Cerda Jara A. Boltengagen T. Hessler G. Mastrobuoni A. Rybak-Wolf S. Kempa R.P. Zinzen A. Woehler N. Rajewsky
September 14, 2015 / Genome Biol Extensive identification and analysis of conserved small ORFs in animals S.D. Mackowiak H. Zauber C. Bielow D. Thiel K. Kutz L. Calviello G. Mastrobuoni N. Rajewsky S. Kempa M. Selbach B. Obermayer
July, 2011 / Genome Res De novo assembly and validation of planaria transcriptome by massive parallel sequencing and shotgun proteomics C. Adamidi Y. Wang D. Gruen G. Mastrobuoni X. You D. Tolle M. Dodt S.D. Mackowiak A. Gogol-Doering P. Oenal A. Rybak E. Ross A.S. Alvarado S. Kempa C. Dieterich N. Rajewsky W. Chen
December 09, 2011 / Mol Cell In vivo and transcriptome-wide identification of RNA binding protein target sites A.C. Jungkamp M. Stoeckius D. Mecenas D. Gruen G. Mastrobuoni S. Kempa N. Rajewsky
April 27, 2012 / EMBO J Gene expression of pluripotency determinants is conserved between mammalian and planarian stem cells P. Onal D. Gruen C. Adamidi A. Rybak J. Solana G. Mastrobuoni Y. Wang H.P. Rahn W. Chen S. Kempa U. Ziebold N. Rajewsky
July 01, 2013 / RNA Biol Identification of LIN28B-bound mRNAs reveals features of target recognition and regulation R. Graf M. Munschauer G. Mastrobuoni F. Mayr U. Heinemann S. Kempa N. Rajewsky M. Landthaler
November 07, 2019 / Genes Dev Context-specific regulation of cell survival by a miRNA-controlled BIM rheostat V. Labi S. Peng F. Klironomos M. Munschauer N. Kastelic T. Chakraborty K. Schoeler E. Derudder M. Martella G. Mastrobuoni L.R. Hernandez-Miranda I. Lahmann C. Kocks C. Birchmeier S. Kempa L. Quintanilla-Martinez de Fend M. Landthaler N. Rajewsky K. Rajewsky
October, 2023 / Nat Methods Spatiotemporal, optogenetic control of gene expression in organoids I. Legnini L. Emmenegger A. Zappulo A. Rybak-Wolf R. Wurmus A. Oliveras Martinez C. Cerda Jara A. Boltengagen T. Hessler G. Mastrobuoni S. Kempa R. Zinzen A. Woehler N. Rajewsky