Scientific Publications Search Search Author Release Date Research Group Search Sort by RelevanceFrom A-ZAuthored onDate/Time RangeRelease date Order AscDesc Ludwig, Leif S. Dr. med. Dr. rer. nat. (8) 2010 (1) 2012 (1) 2014 (1) 2015 (2) 2016 (4) 2017 (1) 2018 (2) 2019 (6) 2020 (2) (-) 2021 (8) 2022 (6) 2024 (1) Advanced Light Microscopy (9) AG Müller/Dechend (ECRC) (35) AG Schreiber [ECRC] (8) Allosteric Proteomics Lab (5) Anchored Signalling (7) Angiogenesis & Metabolism Laboratory (7) Animal Phenotyping (5) Biobank (16) Bioinformatics and Omics Data Science (12) Bioinformatics of RNA Structure and Transcriptome Regulation (2) Biology of Malignant Lymphomas (5) Biomedical Image Analysis (3) Cancer Genetics and Cellular Stress Responses (11) Cardiac MRI (18) Cardiovascular-Hematopoietic Interaction (1) Cell Biology of Immunity (8) Cellular Neurosciences (66) Chromatin (dys)function in disease (1) Clinical Research Unit (7) Clinic of Psychiatry / Modul Psychiatry of Aging (2) Computational methodologies and omic analytics (1) Computational Regulatory Genomics (17) Cryo-Electron Microscopy (2) Developmental Biology / Signal Transduction (28) Developmental Neurobiology (10) Development and Function of Neural Circuits (2) Epigenetic Modifications in Neuroblastoma (9) Epigenetic Regulation and Chromatin Architecture (11) Experimental Ultrahigh-Field MR (43) Gastrointestinal Barrier, Regeneration and Carcinogenesis (8) Genetics and Genomics of Cardiovascular Diseases (29) Genetics of Congenital Heart Disease (6) Genetics of Metabolic and Reproductive Disorders (2) Genome Diversification & Integrity (2) Genome Engineering & Disease Models (20) Genome instability and somatic mosaicism (4) Genomics (54) Host-microbiome factors in cardiovascular disease (18) Hypertension-caused End-Organ Damage (35) Hypertension-Mediated End-Organ Damage (35) Image Data Analysis (3) immune Cell Function in Health and Disease (7) Immune Dysregulations in Oncology (6) Immune Mechanisms and Human Antibodies (3) Immune Regulation and Cancer (4) Innate Immunity & Neuroinflammation (5) In Situ Structural Biology (3) Integrative Vascular Biology (17) Interdisciplinary Retina Research (17) Intracellular Proteolysis (17) Kidney Cell Engineering (3) Magnetic Resonance (43) Mathematical Cell Physiology (10) Mathematical Modelling of Cellular Processes (10) Mechanism-based Cancer Therapies (18) Microenvironmental Regulation in Autoimmunity and Cancer (7) Mobile DNA (10) Molecular and cellular basis of behavio (1) Molecular Biology of Peptide Hormones (74) Molecular Cardiovascular Research (20) Molecular Epidemiology (16) Molecular Genetics of Chronic Inflammation and Allergic Disease (8) Molecular Immunology and Gene Therapy (33) Molecular Oncology (6) Molecular Pathways in Cortical Development (2) Molecular Physiology of Somatic Sensation (20) Myology (13) Nephrology and Inflammatory Vascular Diseases (16) Neural Circuits and Behaviour (5) Neuroimmunology Laboratory (4) Neurovascular link in neuroendocrine tumors (1) Non-coding RNAs and Mechanisms of Cytoplasmic Gene Regulation (4) Organoids (3) Out-patient Clinic for Neuroimmunology (70) Out-patient Clinic for Pediatric Allergology and Atopic Dermatitis (8) Pancreatic Organoid Research and Disease Modeling (19) Pathogenesis of ANCAinduced Glomerulonephritis (17) Pluripotent Stem Cells (7) Protein Production and Characterization (2) Proteome Dynamics (13) Proteomics (13) Proteomics and Metabolomics (8) Proteomics and Molecular Mechanisms of Neurodegenerative Diseases (34) Psychoneuroimmunology (3) Quantitative Developmental Biology (6) Quantitative Stem Cell Biology (3) RNA Biology and Posttranscriptional Regulation (18) Spatial Proteomics (3) (-) Stem Cell Dynamics and Mitochondrial Genomics (8) Stem Cell Modeling of Development and Disease (1) Structural Biology of Membrane-Associated Processes (6) Synaptic Transmission and Plasticity (24) Systems Biology Imaging (2) Systems biology of cardiovascular and neuronal pathologies (1) Systems Biology of Gene Regulatory Elements (17) Systems Hematology, Stem Cells & Precision Medicine (3) Transgenics (20) Translational Approaches in Heart Failure and Cardiometabolic Disease (13) Translational Bioinformatics (16) Translational Cardiology and Functional Genomics (15) Translational Neuroimmunology (11) Translational Oncology of Solid Tumors (143) Translational Organ Models (9) Translational Tumorimmunology (3) Tumor heterogeneity and treatment resistance in pediatric cancer (1) 8 Results: Active Filter: Stem Cell Dynamics and Mitochondrial Genomics2021 Sort: Result score Newest to oldest Oldest to newest November 01, 2021 / Nat Biomed Eng Induction of antigen-specific tolerance by nanobody-antigen adducts that target class-II major histocompatibility complexes N. Pishesha T. Harmand L.Y. Smeding W. Ma L.S. Ludwig R. Janssen A. Islam Y.J. Xie T. Fang N. McCaul W. Pinney H.R. Sugito M.A. Rossotti G. Gonzalez-Sapienza H.L. Ploegh April 01, 2021 / Nature Skin-resident innate lymphoid cells converge on a pathogenic effector state P. Bielecki S.J. Riesenfeld J.C. Hütter E. Torlai Triglia M.S. Kowalczyk R.R. Ricardo-Gonzalez M. Lian M.C. Amezcua Vesely L. Kroehling H. Xu M. Slyper C. Muus L.S. Ludwig E. Christian L. Tao A.J. Kedaigle H.R. Steach A.G. York M.H. Skadow P. Yaghoubi D. Dionne A. Jarret H.M. McGee C.B.M. Porter P. Licona-Limón W. Bailis R. Jackson N. Gagliani G. Gasteiger R.M. Locksley A. Regev R.A. Flavell April 01, 2021 / Nat Biotechnol Massively parallel single-cell mitochondrial DNA genotyping and chromatin profiling C.A. Lareau L.S. Ludwig C. Muus S.H. Gohil T. Zhao Z. Chiang K. Pelka J.M. Verboon W. Luo E. Christian D. Rosebrock G. Getz G.M. Boland F. Chen J.D. Buenrostro N. Hacohen C.J. Wu M.J. Aryee A. Regev V.G. Sankaran December 24, 2021 / BMC Bioinformatics cDNA-detector: detection and removal of cDNA contamination in DNA sequencing libraries M. Qi U. Nayar L.S. Ludwig N. Wagle E. Rheinbay June 07, 2021 / J Exp Med Familial thrombocytopenia due to a complex structural variant resulting in a WAC-ANKRD26 fusion transcript L. Wahlster J.M. Verboon L.S. Ludwig S.C. Black W. Luo K. Garg R.A. Voit R.L. Collins K. Garimella M. Costello K.R. Chao J.K. Goodrich S.P. DiTroia A. O’Donnell-Luria M.E. Talkowski A.D. Michelson A.B. Cantor V.G. Sankaran October 01, 2021 / Nat Biotechnol Scalable, multimodal profiling of chromatin accessibility, gene expression and protein levels in single cells E.P. Mimitou C.A. Lareau K.Y. Chen A.L. Zorzetto-Fernandes Y. Hao Y. Takeshima W. Luo T.S. Huang B.Z. Yeung E. Papalexi P.I. Thakore T. Kibayashi J.B. Wing M. Hata R. Satija K.L. Nazor S. Sakaguchi L.S. Ludwig V.G. Sankaran A. Regev P. Smibert December 01, 2021 / Cancer Discov Longitudinal single-cell dynamics of chromatin accessibility and mitochondrial mutations in chronic lymphocytic leukemia mirror disease history L. Penter S.H. Gohil C. Lareau L.S. Ludwig E.M. Parry T. Huang S. Li W. Zhang D. Livitz I. Leshchiner L. Parida G. Getz L.Z. Rassenti T.J. Kipps J.R. Brown M.S. Davids D.S. Neuberg K.J. Livak V.G. Sankaran C.J. Wu March 02, 2021 / Nat Med Single-cell meta-analysis of SARS-CoV-2 entry genes across tissues and demographics C. Muus M.D. Luecken G. Eraslan L. Sikkema A. Waghray G. Heimberg Y. Kobayashi E.D. Vaishnav A. Subramanian C. Smillie K.A. Jagadeesh E.T. Duong E. Fiskin E.T. Triglia M. Ansari P. Cai B. Lin J. Buchanan S. Chen J. Shu A.L. Haber H. Chung D.T. Montoro T. Adams H. Aliee S.J. Allon Z. Andrusivova I. Angelidis O. Ashenberg K. Bassler C. Bécavin I. Benhar J. Bergenstråhle L. Bergenstråhle L. Bolt E. Braun L.T. Bui S. Callori M. Chaffin E. Chichelnitskiy J. Chiou T.M. Conlon M.S. Cuoco A.S.E. Cuomo M. Deprez G. Duclos D. Fine D.S. Fischer S. Ghazanfar A. Gillich B. Giotti J. Gould M. Guo A.J. Gutierrez A.C. Habermann T. Harvey P. He X. Hou L. Hu Y. Hu A. Jaiswal L. Ji P. Jiang T.S. Kapellos C.S. Kuo L. Larsson M.A. Leney-Greene K. Lim M. Litviňuková L.S. Ludwig S. Lukassen W. Luo H. Maatz E. Madissoon L. Mamanova K. Manakongtreecheep S. Leroy C.H. Mayr I.M. Mbano A.M. McAdams A.N. Nabhan S.K. Nyquist L. Penland O.B. Poirion S. Poli C.C. Qi R. Queen D. Reichart I. Rosas J.C. Schupp C.V. Shea X. Shi R. Sinha R.V. Sit K. Slowikowski M. Slyper N.P. Smith A. Sountoulidis M. Strunz T.B. Sullivan D. Sun C. Talavera-López P. Tan J. Tantivit K.J. Travaglini N.R. Tucker K.A. Vernon M.H. Wadsworth J. Waldman X. Wang K. Xu W. Yan W. Zhao C.G.K. Ziegler
November 01, 2021 / Nat Biomed Eng Induction of antigen-specific tolerance by nanobody-antigen adducts that target class-II major histocompatibility complexes N. Pishesha T. Harmand L.Y. Smeding W. Ma L.S. Ludwig R. Janssen A. Islam Y.J. Xie T. Fang N. McCaul W. Pinney H.R. Sugito M.A. Rossotti G. Gonzalez-Sapienza H.L. Ploegh
April 01, 2021 / Nature Skin-resident innate lymphoid cells converge on a pathogenic effector state P. Bielecki S.J. Riesenfeld J.C. Hütter E. Torlai Triglia M.S. Kowalczyk R.R. Ricardo-Gonzalez M. Lian M.C. Amezcua Vesely L. Kroehling H. Xu M. Slyper C. Muus L.S. Ludwig E. Christian L. Tao A.J. Kedaigle H.R. Steach A.G. York M.H. Skadow P. Yaghoubi D. Dionne A. Jarret H.M. McGee C.B.M. Porter P. Licona-Limón W. Bailis R. Jackson N. Gagliani G. Gasteiger R.M. Locksley A. Regev R.A. Flavell
April 01, 2021 / Nat Biotechnol Massively parallel single-cell mitochondrial DNA genotyping and chromatin profiling C.A. Lareau L.S. Ludwig C. Muus S.H. Gohil T. Zhao Z. Chiang K. Pelka J.M. Verboon W. Luo E. Christian D. Rosebrock G. Getz G.M. Boland F. Chen J.D. Buenrostro N. Hacohen C.J. Wu M.J. Aryee A. Regev V.G. Sankaran
December 24, 2021 / BMC Bioinformatics cDNA-detector: detection and removal of cDNA contamination in DNA sequencing libraries M. Qi U. Nayar L.S. Ludwig N. Wagle E. Rheinbay
June 07, 2021 / J Exp Med Familial thrombocytopenia due to a complex structural variant resulting in a WAC-ANKRD26 fusion transcript L. Wahlster J.M. Verboon L.S. Ludwig S.C. Black W. Luo K. Garg R.A. Voit R.L. Collins K. Garimella M. Costello K.R. Chao J.K. Goodrich S.P. DiTroia A. O’Donnell-Luria M.E. Talkowski A.D. Michelson A.B. Cantor V.G. Sankaran
October 01, 2021 / Nat Biotechnol Scalable, multimodal profiling of chromatin accessibility, gene expression and protein levels in single cells E.P. Mimitou C.A. Lareau K.Y. Chen A.L. Zorzetto-Fernandes Y. Hao Y. Takeshima W. Luo T.S. Huang B.Z. Yeung E. Papalexi P.I. Thakore T. Kibayashi J.B. Wing M. Hata R. Satija K.L. Nazor S. Sakaguchi L.S. Ludwig V.G. Sankaran A. Regev P. Smibert
December 01, 2021 / Cancer Discov Longitudinal single-cell dynamics of chromatin accessibility and mitochondrial mutations in chronic lymphocytic leukemia mirror disease history L. Penter S.H. Gohil C. Lareau L.S. Ludwig E.M. Parry T. Huang S. Li W. Zhang D. Livitz I. Leshchiner L. Parida G. Getz L.Z. Rassenti T.J. Kipps J.R. Brown M.S. Davids D.S. Neuberg K.J. Livak V.G. Sankaran C.J. Wu
March 02, 2021 / Nat Med Single-cell meta-analysis of SARS-CoV-2 entry genes across tissues and demographics C. Muus M.D. Luecken G. Eraslan L. Sikkema A. Waghray G. Heimberg Y. Kobayashi E.D. Vaishnav A. Subramanian C. Smillie K.A. Jagadeesh E.T. Duong E. Fiskin E.T. Triglia M. Ansari P. Cai B. Lin J. Buchanan S. Chen J. Shu A.L. Haber H. Chung D.T. Montoro T. Adams H. Aliee S.J. Allon Z. Andrusivova I. Angelidis O. Ashenberg K. Bassler C. Bécavin I. Benhar J. Bergenstråhle L. Bergenstråhle L. Bolt E. Braun L.T. Bui S. Callori M. Chaffin E. Chichelnitskiy J. Chiou T.M. Conlon M.S. Cuoco A.S.E. Cuomo M. Deprez G. Duclos D. Fine D.S. Fischer S. Ghazanfar A. Gillich B. Giotti J. Gould M. Guo A.J. Gutierrez A.C. Habermann T. Harvey P. He X. Hou L. Hu Y. Hu A. Jaiswal L. Ji P. Jiang T.S. Kapellos C.S. Kuo L. Larsson M.A. Leney-Greene K. Lim M. Litviňuková L.S. Ludwig S. Lukassen W. Luo H. Maatz E. Madissoon L. Mamanova K. Manakongtreecheep S. Leroy C.H. Mayr I.M. Mbano A.M. McAdams A.N. Nabhan S.K. Nyquist L. Penland O.B. Poirion S. Poli C.C. Qi R. Queen D. Reichart I. Rosas J.C. Schupp C.V. Shea X. Shi R. Sinha R.V. Sit K. Slowikowski M. Slyper N.P. Smith A. Sountoulidis M. Strunz T.B. Sullivan D. Sun C. Talavera-López P. Tan J. Tantivit K.J. Travaglini N.R. Tucker K.A. Vernon M.H. Wadsworth J. Waldman X. Wang K. Xu W. Yan W. Zhao C.G.K. Ziegler