Scientific Publications Search Search Author Impact Factor Release Date Research Group Search Sort by RelevanceFrom A-ZAuthored onDate/Time RangeRelease date Order AscDesc Akalin, Altuna Dr. (73) Altmueller, Janine Dr.med. (1) Annibale, Paolo Dr. (1) Bahry, Ella Dr. (1) Barke, Niclas (1) Berruezo Llacuna, Maria (1) Birchmeier-Kohler, Carmen Prof. Dr. (3) Blume, Alexander Dr. (6) Borodina, Tatiana Dr. (1) Carvalho, Silvia Filipa (1) Chekulaeva, Marina Dr. (2) Chu, Van Trung Dr. (1) Costanza, Mariantonia Dr. (2) Daumke, Oliver Prof. Dr. (4) Del Giudice, Simone (1) Deter, Aylina (1) Diecke, Sebastian Dr. (2) Di Virgilio, Michela Prof. Dr. (2) Driesner, Madlen (1) Escobar Fernandez, Helena Dr. (1) Faxel, Miriam (1) Fielitz, Jens Dr. (5) Franke, Vedran Dr. (22) Freimuth, Jonas (1) Gerhardt, Holger Prof. Dr. (1) Ghanbari, Mahsa Dr. (1) Gil, Marine (1) Graf, Robin Dr. (1) Harabula, Izabela-Cezara (1) Haucke, Volker Professor (1) Herzog, Margareta (1) Hinz, Michael Dr. (2) Hirsekorn, Antje (4) Höpken, Uta Elisabeth PD Dr. (2) Hübner, Norbert Prof. Dr. (3) Irastorza Azcarate, Ibai Dr. (1) Janke, Jürgen Dr. (1) Junker, Jan Philipp Prof. Dr. (1) Keller, Lisa (1) Kempa, Stefan Dr. (1) Kirchner, Marieluise Dr. (1) Kocks, Christine Dr. (2) Kolesnichenko, Marina Dr. (3) Kühn, Ralf Dr. (2) Kukalev, Alexander Dr. (2) Lacadie, Scott Allen Dr. (3) Landthaler, Markus Prof. Dr. (5) Lohse, Martin Prof. Dr. (1) Luft, Friedrich Prof. Dr. (2) Lusatis, Simone (1) Mahmoodzadeh, Shokoufeh PD Dr. (1) Marg, Andreas Dr. (2) Meijer, Mandy Dr. (1) Merks, Anne Margarete Dr. (1) Monti, Remo (1) Müller, Thomas Dr. (1) Müthel, Stefanie (3) Ofenbauer, Andreas Dr. (1) Panakova, Daniela Dr. (1) Patarcic, Inga Dr. (1) Patone, Giannino Dr. (1) Pischon, Tobias Prof. Dr. (3) Pombo, Ana Prof. Dr. (3) Preibisch, Stephan Dr. (1) Prigione, Alessandro Prof. Dr. (1) Quedenau, Claudia (1) Rajewsky, Klaus Prof. Dr. (2) Rajewsky, Nikolaus Prof. Dr. (8) Rathgeber, Anja (1) Rehm, Armin Dr. (1) Roske, Yvette Dr. (1) Rrustemi, Trendelina (1) Rudolph, Ina-Maria Dr. (1) Saar, Kathrin Dr. (1) Scheidereit, Claus Prof. Dr. (4) Schmidt-Ullrich, Ruth Dr. (1) Schmitt, Clemens Prof. Dr. (1) Schulz-Menger, Jeanette Prof. Dr. (1) Selbach, Matthias Prof. Dr. (5) Serebreni, Leonid Dr. (1) Siffrin, Volker (1) Spuler, Simone Prof. (9) Szabo, Dominik (1) Thieme, Christoph Dr. (1) Tursun, Baris Dr. (4) Uyar, Bora Dr. (15) Vucicevic, Dubravka (2) Wenzel, Katrin Dr. (1) Willimsky, Gerald Dr. (1) Willnow, Thomas Prof. Dr. (1) Winick-Ng, Warren Dr. (1) Woehler, Andrew Dr. (3) Wurmus, Ricardo (9) Wyler, Emanuel Dr. (4) Zampieri, Niccolo Dr. (1) Zauber, Henrik Dr. (1) Zea Redondo, Luna (1) (-) Chen, Wei Prof. Dr. (2) (-) Janz, Martin Dr. (3) (-) Mathas, Stephan Dr. (3) (-) Mertins, Philipp Dr. (1) (-) Ohler, Uwe Prof. Dr. (10) (-) Popp, Oliver Dr. (1) 2014 (1) 2016 (1) 2017 (3) 2018 (1) 2019 (4) 2020 (2) 2022 (3) 2023 (2) Advanced Light Microscopy (5) AG Müller/Dechend (ECRC) (18) AG Schreiber [ECRC] (1) Anchored Signalling (4) Angiogenesis & Metabolism Laboratory (1) Animal Phenotyping (6) (-) Bioinformatics and Omics Data Science (15) Bioinformatics of RNA Structure and Transcriptome Regulation (1) Biology of Malignant Lymphomas (96) Biomedical Image Analysis (1) Cancer Genetics and Cellular Stress Responses (8) Cardiac MRI (37) Cellular Neurosciences (9) Computational methodologies and omic analytics (1) Computational Regulatory Genomics (138) Developmental Biology / Signal Transduction (3) Developmental Neurobiology (2) Electron Microscopy (2) (-) Endocrinology, Diabetes and Nutritional Medicine (2) Epigenetic Modifications in Neuroblastoma (1) Epigenetic Regulation and Chromatin Architecture (1) Experimental Ultrahigh-Field MR (28) Flow Cytometry (2) Genetics and Genomics of Cardiovascular Diseases (24) Genetics of Congenital Heart Disease (2) Genome Diversification & Integrity (3) Genome Engineering & Disease Models (9) Genomics (2) Host-microbiome factors in cardiovascular disease (1) Hypertension-caused End-Organ Damage (18) Hypertension-Mediated End-Organ Damage (18) Immune Dysregulations in Oncology (1) Immune Mechanisms and Human Antibodies (2) Immune Regulation and Cancer (17) Integrative Vascular Biology (2) Intracellular Proteolysis (5) Magnetic Resonance (28) Mathematical Cell Physiology (2) Mathematical Modelling of Cellular Processes (4) Mechanism-based Cancer Therapies (8) Microenvironmental Regulation in Autoimmunity and Cancer (3) Mobile DNA (7) Molecular Biology of Peptide Hormones (12) Molecular Cardiovascular Research (6) Molecular Immunology and Gene Therapy (3) Molecular Oncology (1) Molecular Pathways in Cortical Development (1) Molecular Physiology of Somatic Sensation (1) Myology (6) Nephrology and Inflammatory Vascular Diseases (4) Non-coding RNAs and Mechanisms of Cytoplasmic Gene Regulation (4) Organoids (1) Pancreatic Organoid Research and Disease Modeling (1) Pluripotent Stem Cells (2) Protein Production and Characterization (2) Proteome Dynamics (21) Proteomics (121) Proteomics and Metabolomics (5) Proteomics and Molecular Mechanisms of Neurodegenerative Diseases (8) Psychoneuroimmunology (6) Quantitative Developmental Biology (3) RNA Biology and Posttranscriptional Regulation (16) Structural Biology of Membrane-Associated Processes (6) Synaptic Transmission and Plasticity (2) Systems Biology Imaging (1) Systems Biology of Gene Regulatory Elements (23) Transgenics (9) Translational Bioinformatics (11) Translational Cardiology and Functional Genomics (7) Translational Oncology of Solid Tumors (8) Translational Tumorimmunology (3) Tumor heterogeneity and treatment resistance in pediatric cancer (2) 17 Results: Active Filter: Chen, Wei Prof. Dr.Janz, Martin Dr.Mathas, Stephan Dr.Mertins, Philipp Dr.Ohler, Uwe Prof. Dr.Popp, Oliver Dr.Bioinformatics and Omics Data ScienceEndocrinology, Diabetes and Nutritional Medicine Sort: Result score Newest to oldest Oldest to newest March 20, 2014 / PLoS ONE Inflammation-induced acute phase response in skeletal muscle and critical illness myopathy C. Langhans S. Weber-Carstens F. Schmidt J. Hamati M. Kny X. Zhu T. Wollersheim S. Koch M. Krebs H. Schulz D. Lodka K. Saar S. Labeit C. Spies N. Hubner J. Spranger S. Spuler M. Boschmann G. Dittmar G. Butler-Browne V. Mouly J. Fielitz July 03, 2017 / Nucleic Acids Res The RNA workbench: best practices for RNA and high-throughput sequencing bioinformatics in Galaxy B.A. Grüning J. Fallmann D. Yusuf S. Will A. Erxleben F. Eggenhofer T. Houwaart B. Batut P. Videm A. Bagnacani M. Wolfien S.C. Lott Y. Hoogstrate W.R. Hess O. Wolkenhauer S. Hoffmann A. Akalin U. Ohler P.F. Stadler R. Backofen September 19, 2017 / Nat Commun RNA localization is a key determinant of neurite-enriched proteome A. Zappulo D. van den Bruck C. Ciolli Mattioli V. Franke K. Imami E. McShane M. Moreno-Estelles L. Calviello A. Filipchyk E. Peguero-Sanchez T. Müller A. Woehler C. Birchmeier E. Merino N. Rajewsky U. Ohler E.O. Mazzoni M. Selbach A. Akalin M. Chekulaeva June 02, 2017 / Nucleic Acids Res RCAS: an RNA centric annotation system for transcriptome-wide regions of interest B. Uyar D. Yusuf R. Wurmus N. Rajewsky U. Ohler A. Akalin June 01, 2016 / Metabolism ANP system activity predicts variability of fat mass reduction and insulin sensitivity during weight loss M. Brachs S. Wiegand V. Leupelt A. Ernert U. Kintscher R. Jumpertz von Schwarzenberg A.M. Decker T. Bobbert N. Hübner W. Chen H. Krude J. Spranger K. Mai December 14, 2018 / EMBO J The IκB kinase complex is a regulator of mRNA stability N. Mikuda M. Kolesnichenko P. Beaudette O. Popp B. Uyar W. Sun A.B. Tufan B. Perder A. Akalin W. Chen P. Mertins G. Dittmar M. Hinz C. Scheidereit January 25, 2019 / Nucleic Acids Res Deciphering human ribonucleoprotein regulatory networks N. Mukherjee H.H. Wessels S. Lebedeva M. Sajek M. Ghanbari A. Garzia A. Munteanu D. Yusuf T. Farazi J.I. Hoell K.M. Akat A. Akalin T. Tuschl U. Ohler March 28, 2019 / Blood Autocrine LTA signaling drives NF-κB and JAK-STAT activity and myeloid gene expression in Hodgkin lymphoma L. von Hoff E. Kärgel V. Franke E. McShane K.W. Schulz-Beiss G. Patone N. Schleussner M. Kolesnichenko N. Hübner O. Daumke M. Selbach A. Akalin S. Mathas C. Scheidereit February 21, 2019 / Genome Biol Reproducible inference of transcription factor footprints in ATAC-seq and DNase-seq datasets using protocol-specific bias modeling A. Karabacak Calviello A. Hirsekorn R. Wurmus D. Yusuf U. Ohler April 09, 2019 / Nat Commun Global identification of functional microRNA-mRNA interactions in Drosophila H.H. Wessels S. Lebedeva A. Hirsekorn R. Wurmus A. Akalin N. Mukherjee U. Ohler Pagination Current page 1 Page 2 Next page Next › Last page Last »
March 20, 2014 / PLoS ONE Inflammation-induced acute phase response in skeletal muscle and critical illness myopathy C. Langhans S. Weber-Carstens F. Schmidt J. Hamati M. Kny X. Zhu T. Wollersheim S. Koch M. Krebs H. Schulz D. Lodka K. Saar S. Labeit C. Spies N. Hubner J. Spranger S. Spuler M. Boschmann G. Dittmar G. Butler-Browne V. Mouly J. Fielitz
July 03, 2017 / Nucleic Acids Res The RNA workbench: best practices for RNA and high-throughput sequencing bioinformatics in Galaxy B.A. Grüning J. Fallmann D. Yusuf S. Will A. Erxleben F. Eggenhofer T. Houwaart B. Batut P. Videm A. Bagnacani M. Wolfien S.C. Lott Y. Hoogstrate W.R. Hess O. Wolkenhauer S. Hoffmann A. Akalin U. Ohler P.F. Stadler R. Backofen
September 19, 2017 / Nat Commun RNA localization is a key determinant of neurite-enriched proteome A. Zappulo D. van den Bruck C. Ciolli Mattioli V. Franke K. Imami E. McShane M. Moreno-Estelles L. Calviello A. Filipchyk E. Peguero-Sanchez T. Müller A. Woehler C. Birchmeier E. Merino N. Rajewsky U. Ohler E.O. Mazzoni M. Selbach A. Akalin M. Chekulaeva
June 02, 2017 / Nucleic Acids Res RCAS: an RNA centric annotation system for transcriptome-wide regions of interest B. Uyar D. Yusuf R. Wurmus N. Rajewsky U. Ohler A. Akalin
June 01, 2016 / Metabolism ANP system activity predicts variability of fat mass reduction and insulin sensitivity during weight loss M. Brachs S. Wiegand V. Leupelt A. Ernert U. Kintscher R. Jumpertz von Schwarzenberg A.M. Decker T. Bobbert N. Hübner W. Chen H. Krude J. Spranger K. Mai
December 14, 2018 / EMBO J The IκB kinase complex is a regulator of mRNA stability N. Mikuda M. Kolesnichenko P. Beaudette O. Popp B. Uyar W. Sun A.B. Tufan B. Perder A. Akalin W. Chen P. Mertins G. Dittmar M. Hinz C. Scheidereit
January 25, 2019 / Nucleic Acids Res Deciphering human ribonucleoprotein regulatory networks N. Mukherjee H.H. Wessels S. Lebedeva M. Sajek M. Ghanbari A. Garzia A. Munteanu D. Yusuf T. Farazi J.I. Hoell K.M. Akat A. Akalin T. Tuschl U. Ohler
March 28, 2019 / Blood Autocrine LTA signaling drives NF-κB and JAK-STAT activity and myeloid gene expression in Hodgkin lymphoma L. von Hoff E. Kärgel V. Franke E. McShane K.W. Schulz-Beiss G. Patone N. Schleussner M. Kolesnichenko N. Hübner O. Daumke M. Selbach A. Akalin S. Mathas C. Scheidereit
February 21, 2019 / Genome Biol Reproducible inference of transcription factor footprints in ATAC-seq and DNase-seq datasets using protocol-specific bias modeling A. Karabacak Calviello A. Hirsekorn R. Wurmus D. Yusuf U. Ohler
April 09, 2019 / Nat Commun Global identification of functional microRNA-mRNA interactions in Drosophila H.H. Wessels S. Lebedeva A. Hirsekorn R. Wurmus A. Akalin N. Mukherjee U. Ohler