Scientific Publications Search Search Author Impact Factor Release Date Research Group Search Sort by RelevanceFrom A-ZAuthored onDate/Time RangeRelease date Order AscDesc Adami, Eleonora Dr. (1) Akalin, Altuna Dr. (73) Altmueller, Janine Dr.med. (289) Annibale, Paolo Dr. (2) Bader, Michael Prof. Dr. (2) Badillo Lisakowski, Victor Christian Dr. (1) Bähring, Sylvia Dr. (2) Bahry, Ella Dr. (1) Barke, Niclas (1) Bartolomaeus, Theda (2) Berruezo Llacuna, Maria (2) Beule, Dieter Dr. (5) Birchmeier, Walter Prof. Dr. (1) Birchmeier-Kohler, Carmen Prof. Dr. (4) Blachut, Susanne (1) Blume, Alexander Dr. (6) Blüthgen, Nils (1) Borodina, Tatiana Dr. (8) Braeuning, Caroline (5) Carvalho, Silvia Filipa (2) Chekulaeva, Marina Dr. (2) Chen, Wei Prof. Dr. (2) Chu, Van Trung Dr. (1) Conrad, Thomas Dr. (15) Costanza, Mariantonia Dr. (2) Daumke, Oliver Prof. Dr. (4) Dechend, Ralf Priv. Doz. (1) Del Giudice, Simone (1) Deter, Aylina (1) Diecke, Sebastian Dr. (69) Di Virgilio, Michela Prof. Dr. (3) Driesner, Madlen (1) Escobar Fernandez, Helena Dr. (4) Faxel, Miriam (1) Fischer, Cornelius Dr. (16) Forslund, Sofia Dr. (2) Frahm-Barske, Silke Dr. (4) Franke, Vedran Dr. (22) Freimuth, Jonas (1) Fritsche, Raphaela Dr. (1) Geisberger, Sabrina Yasmin Dr. (1) Genehr, Carolin (3) Gerhardt, Holger Prof. Dr. (1) Ghanbari, Mahsa Dr. (1) Gil, Marine (1) Gotthardt, Michael Prof. Dr. (2) Gouti, Mina Dr. (2) Graf, Robin Dr. (1) Grosswendt, Stefanie Dr. (1) Haas, Simon Dr. rer. nat. (1) Harabula, Izabela-Cezara (3) Hartl, Kimberly (1) Haucke, Volker Professor (2) Henssen, Anton Prof. Dr. med. (2) Herse, Florian PD Dr. (1) Heuser, Arnd Dr. (2) Hinz, Michael Dr. (2) Hinze, Christian Dr. med. Dipl.-Math. (2) Hirsekorn, Antje (4) Höpken, Uta Elisabeth PD Dr. (3) Hübner, Norbert Prof. Dr. (3) Hummel, Oliver (1) Irastorza Azcarate, Ibai Dr. (1) Izsvak, Zsuzsanna Dr. (1) Janz, Martin Dr. (3) Junker, Jan Philipp Prof. Dr. (2) Jüttner, Rene Dr. (1) Kabuss, Loreen-Claudine (1) Kalnytska, Oleksandra (1) Keller, Lisa (1) Kempa, Stefan Dr. (1) Kettenmann, Helmut Prof. Dr. (2) Kirchner, Marieluise Dr. (2) Klußmann, Enno PD Dr. (3) Kocks, Christine Dr. (3) Kolesnichenko, Marina Dr. (3) Krüger, Norman (2) Kühn, Ralf Dr. (2) Kukalev, Alexander Dr. (3) Kunz, Severine Dr. (3) Kurths, Silke (1) Lacadie, Scott Allen Dr. (3) Lahmann, Ines Dr. (1) Landthaler, Markus Prof. Dr. (7) Langanki, Reika (2) Lee, Young-Ae Prof. Dr. (2) Leutz, Achim Prof. Dr. (1) Lindberg, Eric Lars-Helge (1) Lisowski, Pawel Dr. (4) Liu, Tiannan (1) Lohse, Martin Prof. Dr. (1) Lupianez Garcia, Dario Jesus Dr. (1) Lusatis, Simone (1) Maatz, Henrike Dr. (1) Marenholz, Ingo Dr. (1) Marg, Andreas Dr. (1) Marko, Lajos Dr. (2) Mathas, Stephan Dr. (3) Meijer, Mandy Dr. (1) Merks, Anne Margarete Dr. (1) Mertins, Philipp Dr. (2) Monti, Remo (1) Motta, Edyta (1) Müller, Dominik Prof. Dr. (1) Müller, Marion (1) Müller, Thomas Dr. (1) Müllerke, Stefanie (1) Müthel, Stefanie (3) Na, Il-Kang Dr. (1) Napieczynska, Hanna Dr. (1) Neuschulz, Anika (1) Obermayer-Wasserscheid, Benedikt Dr. (5) Ofenbauer, Andreas Dr. (1) Olivares Chauvet, Pedro Dr. (1) Panakova, Daniela Dr. (1) Patarcic, Inga Dr. (1) Patone, Giannino Dr. (2) Paul, Friedemann Prof. Dr. med. (1) Plumbom, Izabela (1) Pombo, Ana Prof. Dr. (4) Popova, Elena Dr. (1) Popp, Oliver Dr. (1) Preibisch, Stephan Dr. (1) Prigione, Alessandro Prof. Dr. (8) Qadri, Fatimunnisa Dr. (2) Quedenau, Claudia (7) Rajewsky, Klaus Prof. Dr. (2) Rajewsky, Nikolaus Prof. Dr. (12) Rathgeber, Anja (1) Rehm, Armin Dr. (1) Roske, Yvette Dr. (1) Rrustemi, Trendelina (1) Rudolph, Ina-Maria Dr. (2) Ruiz Orera, Jorge Dr. (1) Rybak-Wolf, Agnieszka Dr. (1) Sai, Somesh (1) Schaar, Claudia (1) Scheidereit, Claus Prof. Dr. (4) Schmidt-Krüger, Vanessa Dr. (1) Schmidt-Ullrich, Ruth Dr. (1) Schmitt, Clemens Prof. Dr. (2) Schommer, Sandra (2) Schwarz, Roland Dr. (1) Secener, Ali Kerim (1) Selbach, Matthias Prof. Dr. (5) Semtner, Marcus Dr. (2) Serebreni, Leonid Dr. (1) Sholokh, Anastasiia (2) Siffrin, Volker (2) Sigal, Michael Dr. (2) Spuler, Simone Prof. (6) Stachel-Braum, Philipp Noah Tim (1) Sunaga-Franze, Daniele Yumi Dr. (9) Szabo, Dominik (1) Taube, Martin (1) Teixeira Alves, Luiz Gustavo Dr. (1) Telugu, Narasimha Swamy Dr. (14) Thieme, Christoph Dr. (1) Tursun, Baris Dr. (4) Uyar, Bora Dr. (15) von Kries, Jens Peter Dr. (1) Wanker, Erich Prof. Dr. (4) Weidling, Hannah (1) Wendlinger, Sarah (1) Willimsky, Gerald Dr. (1) Willnow, Thomas Prof. Dr. (3) Winick-Ng, Warren Dr. (1) Woehler, Andrew Dr. (4) Wurmus, Ricardo (9) Wyler, Emanuel Dr. (6) Zampieri, Niccolo Dr. (1) Zea Redondo, Luna (2) Zimmermann, Karin Dr. (1) Zühlke, Kerstin Dr. (1) Zywitza, Vera Dr. (4) (-) Herzog, Margareta (1) (-) Ohler, Uwe Prof. Dr. (11) (-) Vucicevic, Dubravka (2) (-) Zauber, Henrik Dr. (1) 2017 (3) 2018 (2) 2019 (4) 2020 (1) 2021 (1) 2022 (3) Advanced Light Microscopy (1) AG Müller/Dechend (ECRC) (2) (-) Bioinformatics and Omics Data Science (13) Computational Regulatory Genomics (141) Developmental Biology / Signal Transduction (4) Epigenetic Regulation and Chromatin Architecture (1) From Cell States to Function (1) Genetics and Genomics of Cardiovascular Diseases (3) Genome Engineering & Disease Models (1) Hypertension-caused End-Organ Damage (2) Hypertension-Mediated End-Organ Damage (2) Integrative Vascular Biology (1) Intracellular Proteolysis (5) Mathematical Cell Physiology (1) Molecular Cardiovascular Research (1) Molecular Physiology of Somatic Sensation (2) Neural Circuits and Behaviour (2) Non-coding RNAs and Mechanisms of Cytoplasmic Gene Regulation (1) Pancreatic Organoid Research and Disease Modeling (1) (-) Pluripotent Stem Cells (3) Proteome Dynamics (29) Proteomics (2) Proteomics and Metabolomics (2) Quantitative Developmental Biology (3) RNA Biology and Posttranscriptional Regulation (15) Structural Biology of Membrane-Associated Processes (1) Systems Biology Imaging (1) Systems Biology of Gene Regulatory Elements (14) Transgenics (1) Translational Bioinformatics (1) Translational Cardiology and Functional Genomics (3) 14 Results: Active Filter: Herzog, MargaretaOhler, Uwe Prof. Dr.Vucicevic, DubravkaZauber, Henrik Dr.Bioinformatics and Omics Data SciencePluripotent Stem Cells Sort: Result score Newest to oldest Oldest to newest September 10, 2018 / Dev Cell FACT sets a barrier for cell fate reprogramming in Caenorhabditis elegans and human cells E. Kolundzic A. Ofenbauer S.I. Bulut B. Uyar G. Baytek A. Sommermeier S. Seelk M. He A. Hirsekorn D. Vucicevic A. Akalin S. Diecke S.A. Lacadie B. Tursun July 03, 2017 / Nucleic Acids Res The RNA workbench: best practices for RNA and high-throughput sequencing bioinformatics in Galaxy B.A. Grüning J. Fallmann D. Yusuf S. Will A. Erxleben F. Eggenhofer T. Houwaart B. Batut P. Videm A. Bagnacani M. Wolfien S.C. Lott Y. Hoogstrate W.R. Hess O. Wolkenhauer S. Hoffmann A. Akalin U. Ohler P.F. Stadler R. Backofen June 02, 2017 / Nucleic Acids Res RCAS: an RNA centric annotation system for transcriptome-wide regions of interest B. Uyar D. Yusuf R. Wurmus N. Rajewsky U. Ohler A. Akalin April 13, 2021 / Cell Rep Parallel genetics of regulatory sequences using scalable genome editing in vivo J.J. Froehlich B. Uyar M. Herzog K. Theil P. Glažar A. Akalin N. Rajewsky January 13, 2022 / Cell Genom Single-cell-resolved dynamics of chromatin architecture delineate cell and regulatory states in zebrafish embryos A.C. McGarvey W. Kopp D. Vučićević K. Mattonet R. Kempfer A. Hirsekorn I. Bilić M. Gil A. Trinks A.M. Merks D. Panáková A. Pombo A. Akalin J.P. Junker D.Y.R. Stainier D. Garfield U. Ohler S.A. Lacadie January 25, 2019 / Nucleic Acids Res Deciphering human ribonucleoprotein regulatory networks N. Mukherjee H.H. Wessels S. Lebedeva M. Sajek M. Ghanbari A. Garzia A. Munteanu D. Yusuf T. Farazi J.I. Hoell K.M. Akat A. Akalin T. Tuschl U. Ohler July 13, 2020 / Nat Commun Deep learning for genomics using Janggu W. Kopp R. Monti A. Tamburrini U. Ohler A. Akalin February 21, 2019 / Genome Biol Reproducible inference of transcription factor footprints in ATAC-seq and DNase-seq datasets using protocol-specific bias modeling A. Karabacak Calviello A. Hirsekorn R. Wurmus D. Yusuf U. Ohler April 09, 2019 / Nat Commun Global identification of functional microRNA-mRNA interactions in Drosophila H.H. Wessels S. Lebedeva A. Hirsekorn R. Wurmus A. Akalin N. Mukherjee U. Ohler September 19, 2017 / Nat Commun RNA localization is a key determinant of neurite-enriched proteome A. Zappulo D. van den Bruck C. Ciolli Mattioli V. Franke K. Imami E. McShane M. Moreno-Estelles L. Calviello A. Filipchyk E. Peguero-Sanchez T. Müller A. Woehler C. Birchmeier E. Merino N. Rajewsky U. Ohler E.O. Mazzoni M. Selbach A. Akalin M. Chekulaeva Pagination Current page 1 Page 2 Next page Next › Last page Last »
September 10, 2018 / Dev Cell FACT sets a barrier for cell fate reprogramming in Caenorhabditis elegans and human cells E. Kolundzic A. Ofenbauer S.I. Bulut B. Uyar G. Baytek A. Sommermeier S. Seelk M. He A. Hirsekorn D. Vucicevic A. Akalin S. Diecke S.A. Lacadie B. Tursun
July 03, 2017 / Nucleic Acids Res The RNA workbench: best practices for RNA and high-throughput sequencing bioinformatics in Galaxy B.A. Grüning J. Fallmann D. Yusuf S. Will A. Erxleben F. Eggenhofer T. Houwaart B. Batut P. Videm A. Bagnacani M. Wolfien S.C. Lott Y. Hoogstrate W.R. Hess O. Wolkenhauer S. Hoffmann A. Akalin U. Ohler P.F. Stadler R. Backofen
June 02, 2017 / Nucleic Acids Res RCAS: an RNA centric annotation system for transcriptome-wide regions of interest B. Uyar D. Yusuf R. Wurmus N. Rajewsky U. Ohler A. Akalin
April 13, 2021 / Cell Rep Parallel genetics of regulatory sequences using scalable genome editing in vivo J.J. Froehlich B. Uyar M. Herzog K. Theil P. Glažar A. Akalin N. Rajewsky
January 13, 2022 / Cell Genom Single-cell-resolved dynamics of chromatin architecture delineate cell and regulatory states in zebrafish embryos A.C. McGarvey W. Kopp D. Vučićević K. Mattonet R. Kempfer A. Hirsekorn I. Bilić M. Gil A. Trinks A.M. Merks D. Panáková A. Pombo A. Akalin J.P. Junker D.Y.R. Stainier D. Garfield U. Ohler S.A. Lacadie
January 25, 2019 / Nucleic Acids Res Deciphering human ribonucleoprotein regulatory networks N. Mukherjee H.H. Wessels S. Lebedeva M. Sajek M. Ghanbari A. Garzia A. Munteanu D. Yusuf T. Farazi J.I. Hoell K.M. Akat A. Akalin T. Tuschl U. Ohler
July 13, 2020 / Nat Commun Deep learning for genomics using Janggu W. Kopp R. Monti A. Tamburrini U. Ohler A. Akalin
February 21, 2019 / Genome Biol Reproducible inference of transcription factor footprints in ATAC-seq and DNase-seq datasets using protocol-specific bias modeling A. Karabacak Calviello A. Hirsekorn R. Wurmus D. Yusuf U. Ohler
April 09, 2019 / Nat Commun Global identification of functional microRNA-mRNA interactions in Drosophila H.H. Wessels S. Lebedeva A. Hirsekorn R. Wurmus A. Akalin N. Mukherjee U. Ohler
September 19, 2017 / Nat Commun RNA localization is a key determinant of neurite-enriched proteome A. Zappulo D. van den Bruck C. Ciolli Mattioli V. Franke K. Imami E. McShane M. Moreno-Estelles L. Calviello A. Filipchyk E. Peguero-Sanchez T. Müller A. Woehler C. Birchmeier E. Merino N. Rajewsky U. Ohler E.O. Mazzoni M. Selbach A. Akalin M. Chekulaeva