Scientific Publications Search Search Author Impact Factor Release Date Research Group Search Sort by RelevanceFrom A-ZAuthored onDate/Time RangeRelease date Order AscDesc Albrecht, Jan Philipp (1) Beule, Dieter Dr. (1) Franzen, Jannik Moritz (1) Gotthardt, Michael Prof. Dr. (1) Guarino, Vanessa Emanuela (3) Guignard, Leo Dr. (3) Haucke, Volker Professor (1) Hinze, Christian Dr. med. Dipl.-Math. (1) Jüttner, Rene Dr. (1) Kainmüller, Dagmar Prof. Dr. (44) Landthaler, Markus Prof. Dr. (1) Mais, Lisa (5) Obermayer-Wasserscheid, Benedikt Dr. (1) Preibisch, Stephan Dr. (2) Rathjen, Fritz Prof. Dr. (1) Rumberger, Josef Lorenz (6) Winklmayr, Claudia Simone (1) Wyler, Emanuel Dr. (1) Yu, Xiaoyan (1) 2008 (3) 2009 (5) 2010 (2) 2011 (1) 2012 (1) 2013 (2) 2014 (2) 2015 (2) 2016 (4) 2017 (3) 2019 (3) 2020 (4) 2021 (3) 2022 (8) 2023 (6) 2024 (4) Advanced Light Microscopy (43) AG Müller/Dechend (ECRC) (472) AG Schreiber [ECRC] (57) Allosteric Proteomics Lab (18) Anchored Signalling (114) Angiogenesis & Metabolism Laboratory (58) Animal Phenotyping (50) Biobank (424) Bioinformatics and Omics Data Science (90) Bioinformatics of RNA Structure and Transcriptome Regulation (47) Biology of Malignant Lymphomas (97) (-) Biomedical Image Analysis (53) Cancer Genetics and Cellular Stress Responses (96) Cardiac MRI (283) Cardiovascular-Hematopoietic Interaction (16) Cell Biology of Immunity (62) Cellular Neurosciences (456) Chromatin (dys)function in disease (19) Clinical Research Unit (21) Clinic of Psychiatry / Modul Psychiatry of Aging (68) Computational methodologies and omic analytics (14) Computational Regulatory Genomics (168) Cryo-Electron Microscopy (17) Developmental Biology / Signal Transduction (211) Developmental Neurobiology (110) Development and Function of Neural Circuits (34) Electron Microscopy (7) Endocrinology, Diabetes and Nutritional Medicine (36) Epigenetic Modifications in Neuroblastoma (79) Epigenetic Regulation and Chromatin Architecture (129) Experimental Ultrahigh-Field MR (339) Flow Cytometry (8) From Cell States to Function (9) Gastrointestinal Barrier, Regeneration and Carcinogenesis (44) Genetics and Genomics of Cardiovascular Diseases (431) Genetics of Congenital Heart Disease (69) Genetics of Metabolic and Reproductive Disorders (24) Genome Diversification & Integrity (29) Genome Engineering & Disease Models (156) Genome instability and somatic mosaicism (41) Genomics (347) Host-microbiome factors in cardiovascular disease (138) Hypertension-caused End-Organ Damage (472) Hypertension-Mediated End-Organ Damage (472) Image Data Analysis (15) immune Cell Function in Health and Disease (35) Immune Dysregulations in Oncology (69) Immune Mechanisms and Human Antibodies (23) Immune Regulation and Cancer (95) Innate Immunity & Neuroinflammation (67) In Situ Structural Biology (55) Integrative Vascular Biology (162) Interdisciplinary Retina Research (110) Intracellular Proteolysis (138) Kidney Cell Engineering (17) Magnetic Resonance (339) Mathematical Cell Physiology (126) Mathematical Modelling of Cellular Processes (60) Mechanism-based Cancer Therapies (86) Microenvironmental Regulation in Autoimmunity and Cancer (84) Mobile DNA (188) Molecular and cellular basis of behavio (9) Molecular Biology of Peptide Hormones (787) Molecular Cardiovascular Research (205) Molecular Epidemiology (424) Molecular Genetics of Chronic Inflammation and Allergic Disease (90) Molecular Immunology and Gene Therapy (239) Molecular mechanisms of environment sensing (12) Molecular Oncology (27) Molecular Pathways in Cortical Development (30) Molecular Physiology of Somatic Sensation (174) Myology (135) Nephrology and Inflammatory Vascular Diseases (159) Neural Circuits and Behaviour (62) Neuroimmunology Laboratory (51) Neurovascular link in neuroendocrine tumors (8) Non-coding RNAs and Mechanisms of Cytoplasmic Gene Regulation (28) Organoids (10) Out-patient Clinic for Neuroimmunology (680) Out-patient Clinic for Pediatric Allergology and Atopic Dermatitis (90) Pancreatic Organoid Research and Disease Modeling (130) Pathogenesis of ANCAinduced Glomerulonephritis (110) Pluripotent Stem Cells (72) Protein Production and Characterization (28) Proteome Dynamics (138) Proteomics (135) Proteomics and Metabolomics (99) Proteomics and Molecular Mechanisms of Neurodegenerative Diseases (377) Psychoneuroimmunology (47) Quantitative Developmental Biology (50) Quantitative Stem Cell Biology (28) RNA Biology and Posttranscriptional Regulation (140) Single Molecule Biophysics probing Quantitative Neuroscience (14) Spatial Proteomics (26) Stem Cell Dynamics and Mitochondrial Genomics (43) Stem Cell Modeling of Development and Disease (20) Structural Biology of Membrane-Associated Processes (110) Synaptic Transmission and Plasticity (209) Systems Biology Imaging (35) Systems biology of cardiovascular and neuronal pathologies (11) Systems Biology of Gene Regulatory Elements (190) Systems Hematology, Stem Cells & Precision Medicine (46) Transgenics (156) Translational Approaches in Heart Failure and Cardiometabolic Disease (121) Translational Bioinformatics (105) Translational Cardiology and Functional Genomics (103) Translational Neuroimmunology (56) Translational Oncology of Solid Tumors (917) Translational Organ Models (75) Translational Tumorimmunology (33) Tumor heterogeneity and treatment resistance in pediatric cancer (8) 53 Results: Active Filter: Biomedical Image Analysis Sort: Result score Newest to oldest Oldest to newest February 12, 2024 / Nat Methods Metrics reloaded: recommendations for image analysis validation L. Maier-Hein A. Reinke P. Godau M.D. Tizabi F. Buettner E. Christodoulou B. Glocker F. Isensee J. Kleesiek M. Kozubek M. Reyes M.A. Riegler M. Wiesenfarth A.E. Kavur C.H. Sudre M. Baumgartner M. Eisenmann D. Heckmann-Nötzel T. Rädsch L. Acion M. Antonelli T. Arbel S. Bakas A. Benis M.B. Blaschko M.J. Cardoso V. Cheplygina B.A. Cimini G.S. Collins K. Farahani L. Ferrer A. Galdran B. van Ginneken R. Haase D.A. Hashimoto M.M. Hoffman M. Huisman P. Jannin C.E. Kahn D. Kainmueller B. Kainz A. Karargyris A. Karthikesalingam F. Kofler A. Kopp-Schneider A. Kreshuk T. Kurc B.A. Landman G. Litjens A. Madani K. Maier-Hein A.L. Martel P. Mattson E. Meijering B. Menze K.G.M. Moons H. Müller B. Nichyporuk F. Nickel J. Petersen N. Rajpoot N. Rieke J. Saez-Rodriguez C.I. Sánchez S. Shetty M. van Smeden R.M. Summers A.A. Taha A. Tiulpin S.A. Tsaftaris B. Van Calster G. Varoquaux P.F. Jäger February 01, 2024 / Nat Methods Understanding metric-related pitfalls in image analysis validation A. Reinke M.D. Tizabi M. Baumgartner M. Eisenmann D. Heckmann-Nötzel A.E. Kavur T. Rädsch C.H. Sudre L. Acion M. Antonelli T. Arbel S. Bakas A. Benis F. Buettner M.J. Cardoso V. Cheplygina J. Chen E. Christodoulou B.A. Cimini K. Farahani L. Ferrer A. Galdran B. van Ginneken B. Glocker P. Godau D.A. Hashimoto M.M. Hoffman M. Huisman F. Isensee P. Jannin C.E. Kahn D. Kainmueller B. Kainz A. Karargyris J. Kleesiek F. Kofler T. Kooi A. Kopp-Schneider M. Kozubek A. Kreshuk T. Kurc B.A. Landman G. Litjens A. Madani K. Maier-Hein A.L. Martel E. Meijering B. Menze K.G.M. Moons H. Müller B. Nichyporuk F. Nickel J. Petersen S.M. Rafelski N. Rajpoot M. Reyes M.A. Riegler N. Rieke J. Saez-Rodriguez C.I. Sánchez S. Shetty R.M. Summers A.A. Taha A. Tiulpin S.A. Tsaftaris B. Van Calster G. Varoquaux Z.R. Yaniv P.F. Jäger L. Maier-Hein August 01, 2024 / Futur Gener Comp Syst Validity constraints for data analysis workflows F. Schintke K. Belhajjame N. De Mecquenem D. Frantz V.E. Guarino M. Hilbrich F. Lehmann P. Missier R. Sattler J.A. Sparka D.T. Speckhard H. Stolte A.D. Vu U. Leser March 11, 2021 / Eur Respir J Plasma mediators in patients with severe COVID-19 cause lung endothelial barrier failure L. Michalick S. Weidenfeld B. Grimmer D. Fatykhova P.D. Solymosi F. Behrens M. Dohmen M.C. Brack S. Schulz E. Thomasch S. Simmons H. Müller-Redetzky N. Suttorp F. Kurth J. Neudecker M. Toennies T.T. Bauer S. Eggeling V.M. Corman A.C. Hocke M. Witzenrath S. Hippenstiel W.M. Kuebler December 11, 2020 / Science Mouse embryonic stem cells self-organize into trunk-like structures with neural tube and somites J.V. Veenvliet A. Bolondi H. Kretzmer L. Haut M. Scholze-Wittler D. Schifferl F. Koch L. Guignard A.S. Kumar M. Pustet S. Heimann R. Buschow L. Wittler B. Timmermann A. Meissner B.G. Herrmann November 20, 2020 / Lect Notes Comput Sci PatchPerPix for instance segmentation L. Mais P. Hirsch D. Kainmueller November 01, 2021 / Datenbank Spektrum The Collaborative Research Center FONDA U. Leser M. Hilbrich C. Draxl P. Eisert L. Grunske P. Hostert D. Kainmüller O. Kao B. Kehr T. Kehrer C. Koch V. Markl H. Meyerhenke T. Rabl A. Reinefeld K. Reinert K. Ritter B. Scheuermann F. Schintke N. Schweikardt M. Weidlich September 16, 2022 / Lect Notes Comput Sci Tracking by weakly-supervised learning and graph optimization for whole-embryo c. elegans lineages P. Hirsch C. Malin-Mayor A. Santella S. Preibisch D. Kainmueller J. Funke December 01, 2022 / Eur Respir J Human lungs show limited permissiveness for SARS-CoV-2 due to scarce ACE2 levels but virus-induced expansion of inflammatory macrophages K. Hönzke B. Obermayer C. Mache D. Fathykova M. Kessler S. Dökel E. Wyler M. Baumgardt A. Löwa K. Hoffmann P. Graff J. Schulze M. Mieth K. Hellwig Z. Demir B. Biere L. Brunotte A. Mecate-Zambrano J. Bushe M. Dohmen C. Hinze S. Elezkurtaj M. Tönnies T.T. Bauer S. Eggeling H.L. Tran P. Schneider J. Neudecker J.C. Rückert K.M. Schmidt-Ott J. Busch F. Klauschen D. Horst H. Radbruch J. Radke F. Heppner V.M. Corman D. Niemeyer M.A. Müller C. Goffinet R. Mothes A. Pascual-Reguant A.E. Hauser D. Beule M. Landthaler S. Ludwig N. Suttorp M. Witzenrath A.D. Gruber C. Drosten L.E. Sander T. Wolff S. Hippenstiel A.C. Hocke August 17, 2022 / 2022 IEEE International Symposium on Biomedical Imaging Challenges (ISBIC) Panoptic segmentation with highly imbalanced semantic labels J.L. Rumberger E. Baumann P. Hirsch A. Janowczyk I. Zlobec D. Kainmueller Pagination Current page 1 Page 2 Page 3 Page 4 … Next page Next › Last page Last »
February 12, 2024 / Nat Methods Metrics reloaded: recommendations for image analysis validation L. Maier-Hein A. Reinke P. Godau M.D. Tizabi F. Buettner E. Christodoulou B. Glocker F. Isensee J. Kleesiek M. Kozubek M. Reyes M.A. Riegler M. Wiesenfarth A.E. Kavur C.H. Sudre M. Baumgartner M. Eisenmann D. Heckmann-Nötzel T. Rädsch L. Acion M. Antonelli T. Arbel S. Bakas A. Benis M.B. Blaschko M.J. Cardoso V. Cheplygina B.A. Cimini G.S. Collins K. Farahani L. Ferrer A. Galdran B. van Ginneken R. Haase D.A. Hashimoto M.M. Hoffman M. Huisman P. Jannin C.E. Kahn D. Kainmueller B. Kainz A. Karargyris A. Karthikesalingam F. Kofler A. Kopp-Schneider A. Kreshuk T. Kurc B.A. Landman G. Litjens A. Madani K. Maier-Hein A.L. Martel P. Mattson E. Meijering B. Menze K.G.M. Moons H. Müller B. Nichyporuk F. Nickel J. Petersen N. Rajpoot N. Rieke J. Saez-Rodriguez C.I. Sánchez S. Shetty M. van Smeden R.M. Summers A.A. Taha A. Tiulpin S.A. Tsaftaris B. Van Calster G. Varoquaux P.F. Jäger
February 01, 2024 / Nat Methods Understanding metric-related pitfalls in image analysis validation A. Reinke M.D. Tizabi M. Baumgartner M. Eisenmann D. Heckmann-Nötzel A.E. Kavur T. Rädsch C.H. Sudre L. Acion M. Antonelli T. Arbel S. Bakas A. Benis F. Buettner M.J. Cardoso V. Cheplygina J. Chen E. Christodoulou B.A. Cimini K. Farahani L. Ferrer A. Galdran B. van Ginneken B. Glocker P. Godau D.A. Hashimoto M.M. Hoffman M. Huisman F. Isensee P. Jannin C.E. Kahn D. Kainmueller B. Kainz A. Karargyris J. Kleesiek F. Kofler T. Kooi A. Kopp-Schneider M. Kozubek A. Kreshuk T. Kurc B.A. Landman G. Litjens A. Madani K. Maier-Hein A.L. Martel E. Meijering B. Menze K.G.M. Moons H. Müller B. Nichyporuk F. Nickel J. Petersen S.M. Rafelski N. Rajpoot M. Reyes M.A. Riegler N. Rieke J. Saez-Rodriguez C.I. Sánchez S. Shetty R.M. Summers A.A. Taha A. Tiulpin S.A. Tsaftaris B. Van Calster G. Varoquaux Z.R. Yaniv P.F. Jäger L. Maier-Hein
August 01, 2024 / Futur Gener Comp Syst Validity constraints for data analysis workflows F. Schintke K. Belhajjame N. De Mecquenem D. Frantz V.E. Guarino M. Hilbrich F. Lehmann P. Missier R. Sattler J.A. Sparka D.T. Speckhard H. Stolte A.D. Vu U. Leser
March 11, 2021 / Eur Respir J Plasma mediators in patients with severe COVID-19 cause lung endothelial barrier failure L. Michalick S. Weidenfeld B. Grimmer D. Fatykhova P.D. Solymosi F. Behrens M. Dohmen M.C. Brack S. Schulz E. Thomasch S. Simmons H. Müller-Redetzky N. Suttorp F. Kurth J. Neudecker M. Toennies T.T. Bauer S. Eggeling V.M. Corman A.C. Hocke M. Witzenrath S. Hippenstiel W.M. Kuebler
December 11, 2020 / Science Mouse embryonic stem cells self-organize into trunk-like structures with neural tube and somites J.V. Veenvliet A. Bolondi H. Kretzmer L. Haut M. Scholze-Wittler D. Schifferl F. Koch L. Guignard A.S. Kumar M. Pustet S. Heimann R. Buschow L. Wittler B. Timmermann A. Meissner B.G. Herrmann
November 20, 2020 / Lect Notes Comput Sci PatchPerPix for instance segmentation L. Mais P. Hirsch D. Kainmueller
November 01, 2021 / Datenbank Spektrum The Collaborative Research Center FONDA U. Leser M. Hilbrich C. Draxl P. Eisert L. Grunske P. Hostert D. Kainmüller O. Kao B. Kehr T. Kehrer C. Koch V. Markl H. Meyerhenke T. Rabl A. Reinefeld K. Reinert K. Ritter B. Scheuermann F. Schintke N. Schweikardt M. Weidlich
September 16, 2022 / Lect Notes Comput Sci Tracking by weakly-supervised learning and graph optimization for whole-embryo c. elegans lineages P. Hirsch C. Malin-Mayor A. Santella S. Preibisch D. Kainmueller J. Funke
December 01, 2022 / Eur Respir J Human lungs show limited permissiveness for SARS-CoV-2 due to scarce ACE2 levels but virus-induced expansion of inflammatory macrophages K. Hönzke B. Obermayer C. Mache D. Fathykova M. Kessler S. Dökel E. Wyler M. Baumgardt A. Löwa K. Hoffmann P. Graff J. Schulze M. Mieth K. Hellwig Z. Demir B. Biere L. Brunotte A. Mecate-Zambrano J. Bushe M. Dohmen C. Hinze S. Elezkurtaj M. Tönnies T.T. Bauer S. Eggeling H.L. Tran P. Schneider J. Neudecker J.C. Rückert K.M. Schmidt-Ott J. Busch F. Klauschen D. Horst H. Radbruch J. Radke F. Heppner V.M. Corman D. Niemeyer M.A. Müller C. Goffinet R. Mothes A. Pascual-Reguant A.E. Hauser D. Beule M. Landthaler S. Ludwig N. Suttorp M. Witzenrath A.D. Gruber C. Drosten L.E. Sander T. Wolff S. Hippenstiel A.C. Hocke
August 17, 2022 / 2022 IEEE International Symposium on Biomedical Imaging Challenges (ISBIC) Panoptic segmentation with highly imbalanced semantic labels J.L. Rumberger E. Baumann P. Hirsch A. Janowczyk I. Zlobec D. Kainmueller