Scientific Publications Search Search Author Impact Factor Release Date Research Group Search Sort by RelevanceFrom A-ZAuthored onDate/Time RangeRelease date Order AscDesc Altmueller, Janine Dr.med. (1) Annibale, Paolo Dr. (1) Bahry, Ella Dr. (1) Barke, Niclas (1) Berruezo Llacuna, Maria (1) Birchmeier-Kohler, Carmen Prof. Dr. (3) Blume, Alexander Dr. (6) Borodina, Tatiana Dr. (1) Carvalho, Silvia Filipa (1) Cerda Jara, Cledi Alicia (1) Chekulaeva, Marina Dr. (2) Chen, Wei Prof. Dr. (1) Chu, Van Trung Dr. (1) Costanza, Mariantonia Dr. (2) Daumke, Oliver Prof. Dr. (4) Del Giudice, Simone (1) Deter, Aylina (1) Diecke, Sebastian Dr. (2) Di Virgilio, Michela Prof. Dr. (2) Driesner, Madlen (1) Emmenegger, Lisa (1) Escobar Fernandez, Helena Dr. (1) Faxel, Miriam (1) Franke, Vedran Dr. (23) Freimuth, Jonas (1) Gerhardt, Holger Prof. Dr. (1) Ghanbari, Mahsa Dr. (1) Gil, Marine (1) Graf, Robin Dr. (1) Harabula, Izabela-Cezara (1) Haucke, Volker Professor (1) Herzog, Margareta (1) Hinz, Michael Dr. (2) Hirsekorn, Antje (4) Höpken, Uta Elisabeth PD Dr. (2) Hübner, Norbert Prof. Dr. (1) Irastorza Azcarate, Ibai Dr. (1) Janz, Martin Dr. (3) Junker, Jan Philipp Prof. Dr. (1) Keller, Lisa (1) Kempa, Stefan Dr. (2) Kirchner, Marieluise Dr. (1) Kocks, Christine Dr. (2) Kolesnichenko, Marina Dr. (3) Kühn, Ralf Dr. (1) Kukalev, Alexander Dr. (2) Lacadie, Scott Allen Dr. (3) Landthaler, Markus Prof. Dr. (6) Lohse, Martin Prof. Dr. (1) Lusatis, Simone (1) Marg, Andreas Dr. (1) Mastrobuoni, Guido Dr. (1) Mathas, Stephan Dr. (3) Meijer, Mandy Dr. (1) Merks, Anne Margarete Dr. (1) Mertins, Philipp Dr. (1) Monti, Remo (1) Müller, Thomas Dr. (1) Müthel, Stefanie (3) Ofenbauer, Andreas Dr. (1) Ohler, Uwe Prof. Dr. (10) Oliveras Martinez, Anna Dr. (1) Panakova, Daniela Dr. (1) Patarcic, Inga Dr. (1) Patone, Giannino Dr. (1) Pombo, Ana Prof. Dr. (3) Popp, Oliver Dr. (1) Preibisch, Stephan Dr. (1) Prigione, Alessandro Prof. Dr. (1) Quedenau, Claudia (1) Rajewsky, Klaus Prof. Dr. (2) Rathgeber, Anja (1) Rehm, Armin Dr. (1) Roske, Yvette Dr. (1) Rudolph, Ina-Maria Dr. (1) Rybak-Wolf, Agnieszka Dr. (1) Scheidereit, Claus Prof. Dr. (4) Schmidt-Ullrich, Ruth Dr. (1) Schmitt, Clemens Prof. Dr. (1) Selbach, Matthias Prof. Dr. (5) Serebreni, Leonid Dr. (1) Siffrin, Volker (1) Spuler, Simone Prof. (2) Szabo, Dominik (1) Thieme, Christoph Dr. (1) Tursun, Baris Dr. (4) Uyar, Bora Dr. (15) Vucicevic, Dubravka (2) Willimsky, Gerald Dr. (1) Willnow, Thomas Prof. Dr. (1) Winick-Ng, Warren Dr. (1) Woehler, Andrew Dr. (4) Wurmus, Ricardo (10) Wyler, Emanuel Dr. (5) Zampieri, Niccolo Dr. (1) Zauber, Henrik Dr. (1) Zea Redondo, Luna (1) Zinzen, Robert Patrick Dr. (1) (-) Akalin, Altuna Dr. (75) (-) Rajewsky, Nikolaus Prof. Dr. (9) 2006 (2) 2007 (1) 2008 (1) 2009 (3) 2010 (3) 2011 (1) 2012 (4) 2013 (3) 2014 (3) 2015 (3) 2017 (6) 2018 (6) 2019 (9) 2020 (7) 2021 (9) 2022 (7) 2023 (6) 2024 (2) AG Müller/Dechend (ECRC) (1) Animal Phenotyping (1) (-) Bioinformatics and Omics Data Science (76) Biology of Malignant Lymphomas (4) Cancer Genetics and Cellular Stress Responses (1) Cardiac MRI (1) Computational methodologies and omic analytics (1) Computational Regulatory Genomics (14) Developmental Biology / Signal Transduction (10) Development and Function of Neural Circuits (2) Electron Microscopy (1) Epigenetic Regulation and Chromatin Architecture (5) Experimental Ultrahigh-Field MR (4) Flow Cytometry (1) From Cell States to Function (4) Gastrointestinal Barrier, Regeneration and Carcinogenesis (1) Genetics and Genomics of Cardiovascular Diseases (6) Genome Diversification & Integrity (3) Genome Engineering & Disease Models (5) Genomics (4) Host-microbiome factors in cardiovascular disease (4) Hypertension-caused End-Organ Damage (1) Hypertension-Mediated End-Organ Damage (1) Image Data Analysis (1) Immune Regulation and Cancer (3) Integrative Vascular Biology (3) Magnetic Resonance (4) Mathematical Cell Physiology (2) Microenvironmental Regulation in Autoimmunity and Cancer (2) Molecular Biology of Peptide Hormones (4) Molecular Cardiovascular Research (2) Molecular Immunology and Gene Therapy (10) Molecular Physiology of Somatic Sensation (1) Myology (3) Neuroimmunology Laboratory (1) Non-coding RNAs and Mechanisms of Cytoplasmic Gene Regulation (7) Organoids (11) Pluripotent Stem Cells (5) Protein Production and Characterization (1) Proteome Dynamics (18) Proteomics (3) Proteomics and Metabolomics (11) Proteomics and Molecular Mechanisms of Neurodegenerative Diseases (5) Psychoneuroimmunology (1) Quantitative Developmental Biology (3) Quantitative Stem Cell Biology (2) RNA Biology and Posttranscriptional Regulation (33) Structural Biology of Membrane-Associated Processes (9) Systems Biology Imaging (9) Systems Biology of Gene Regulatory Elements (168) Transgenics (5) Translational Bioinformatics (11) Translational Cardiology and Functional Genomics (3) Translational Tumorimmunology (1) 76 Results: Active Filter: Akalin, Altuna Dr.Rajewsky, Nikolaus Prof. Dr.Bioinformatics and Omics Data Science Sort: Result score Newest to oldest Oldest to newest April 11, 2024 / Nat Commun Pathogenic mutations of human phosphorylation sites affect protein–protein interactions T. Rrustemi K. Meyer Y. Roske B. Uyar A. Akalin K. Imami Y. Ishihama O. Daumke M. Selbach August 06, 2024 / BMC Bioinformatics scMaui: a widely applicable deep learning framework for single-cell multiomics integration in the presence of batch effects and missing data Y. Jeong J. Ronen W. Kopp P. Lutsik A. Akalin March 24, 2021 / bioRxiv Herpesviral induction of germline transcription factor DUX4 is critical for viral gene expression S. Walter V. Franke N. Drayman E. Wyler S. Tay M. Landthaler A. Akalin A. Ensser F. Full February 09, 2022 / bioRxiv Spatio-temporal, optogenetic control of gene expression in organoids I. Legnini L. Emmenegger A. Zappulo R. Wurmus A. Oliveras Martinez C. Cerda Jara A. Boltengagen T. Hessler G. Mastrobuoni A. Rybak-Wolf S. Kempa R.P. Zinzen A. Woehler N. Rajewsky October 19, 2021 / Nat Commun PHF3 regulates neuronal gene expression through the Pol II CTD reader domain SPOC L.M. Appel V. Franke M. Bruno I. Grishkovskaya A. Kasiliauskaite T. Kaufmann U.E. Schoeberl M.G. Puchinger S. Kostrhon C. Ebenwaldner M. Sebesta E. Beltzung K. Mechtler G. Lin A. Vlasova M. Leeb R. Pavri A. Stark A. Akalin R. Stefl C. Bernecky K. Djinovic-Carugo D. Slade October 26, 2021 / Cell Rep Lymphocyte access to lymphoma is impaired by high endothelial venule regression L. Menzel M. Zschummel T. Crowley V. Franke M. Grau C. Ulbricht A. Hauser V. Siffrin M. Bajénoff S.E. Acton A. Akalin G. Lenz G. Willimsky U.E. Höpken A. Rehm November 25, 2021 / Nature Cell-type specialization is encoded by specific chromatin topologies W. Winick-Ng A. Kukalev I. Harabula L. Zea-Redondo D. Szabó M. Meijer L. Serebreni Y. Zhang S. Bianco A.M. Chiariello I. Irastorza-Azcarate C.J. Thieme T.M. Sparks S. Carvalho L. Fiorillo F. Musella E. Irani E.T. Triglia A.A. Kolodziejczyk A. Abentung G. Apostolova E.J. Paul V. Franke R. Kempfer A. Akalin S.A. Teichmann G. Dechant M.A. Ungless M. Nicodemi L. Welch G. Castelo-Branco A. Pombo June, 2023 / NAR Genom Bioinform Cardiovascular disease biomarkers derived from circulating cell-free DNA methylation R.R.C. Cuadrat A. Kratzer H.G. Arnal A.C. Rathgeber K. Wreczycka A. Blume I.B. Gündüz V. Ebenal T. Mauno B. Osberg M. Moobed J. Hartung K. Jakobs C. Seppelt D. Meteva A. Haghikia D.M. Leistner Ulf Landmesser A. Akalin December 06, 2021 / Genome Biol The SEQC2 epigenomics quality control (EpiQC) study J. Foox J. Nordlund C. Lalancette T. Gong M. Lacey S. Lent B.W. Langhorst V.K.C. Ponnaluri L. Williams K.R. Padmanabhan R. Cavalcante A. Lundmark D. Butler C. Mozsary J. Gurvitch J.M. Greally M. Suzuki M. Menor M. Nasu A. Alonso C. Sheridan A. Scherer S. Bruinsma G. Golda A. Muszynska P.P. Łabaj M.A. Campbell F. Wos A. Raine U. Liljedahl T. Axelsson C. Wang Z. Chen Z. Yang J. Li X. Yang H. Wang A. Melnick S. Guo A. Blume V. Franke I. Ibanez de Caceres C. Rodriguez-Antolin R. Rosas J.W. Davis J. Ishii D.B. Megherbi W. Xiao W. Liao J. Xu H. Hong B. Ning W. Tong A. Akalin Y. Wang Y. Deng C.E. Mason June 24, 2021 / Sci Rep Predicting lethal courses in critically ill COVID-19 patients using a machine learning model trained on patients with non-COVID-19 viral pneumonia G. Lichtner F. Balzer S. Haufe N. Giesa F. Schiefenhövel M. Schmieding C. Jurth W. Kopp A. Akalin S.J. Schaller S. Weber-Carstens C. Spies F. von Dincklage Pagination Current page 1 Page 2 Page 3 Page 4 … Next page Next › Last page Last »
April 11, 2024 / Nat Commun Pathogenic mutations of human phosphorylation sites affect protein–protein interactions T. Rrustemi K. Meyer Y. Roske B. Uyar A. Akalin K. Imami Y. Ishihama O. Daumke M. Selbach
August 06, 2024 / BMC Bioinformatics scMaui: a widely applicable deep learning framework for single-cell multiomics integration in the presence of batch effects and missing data Y. Jeong J. Ronen W. Kopp P. Lutsik A. Akalin
March 24, 2021 / bioRxiv Herpesviral induction of germline transcription factor DUX4 is critical for viral gene expression S. Walter V. Franke N. Drayman E. Wyler S. Tay M. Landthaler A. Akalin A. Ensser F. Full
February 09, 2022 / bioRxiv Spatio-temporal, optogenetic control of gene expression in organoids I. Legnini L. Emmenegger A. Zappulo R. Wurmus A. Oliveras Martinez C. Cerda Jara A. Boltengagen T. Hessler G. Mastrobuoni A. Rybak-Wolf S. Kempa R.P. Zinzen A. Woehler N. Rajewsky
October 19, 2021 / Nat Commun PHF3 regulates neuronal gene expression through the Pol II CTD reader domain SPOC L.M. Appel V. Franke M. Bruno I. Grishkovskaya A. Kasiliauskaite T. Kaufmann U.E. Schoeberl M.G. Puchinger S. Kostrhon C. Ebenwaldner M. Sebesta E. Beltzung K. Mechtler G. Lin A. Vlasova M. Leeb R. Pavri A. Stark A. Akalin R. Stefl C. Bernecky K. Djinovic-Carugo D. Slade
October 26, 2021 / Cell Rep Lymphocyte access to lymphoma is impaired by high endothelial venule regression L. Menzel M. Zschummel T. Crowley V. Franke M. Grau C. Ulbricht A. Hauser V. Siffrin M. Bajénoff S.E. Acton A. Akalin G. Lenz G. Willimsky U.E. Höpken A. Rehm
November 25, 2021 / Nature Cell-type specialization is encoded by specific chromatin topologies W. Winick-Ng A. Kukalev I. Harabula L. Zea-Redondo D. Szabó M. Meijer L. Serebreni Y. Zhang S. Bianco A.M. Chiariello I. Irastorza-Azcarate C.J. Thieme T.M. Sparks S. Carvalho L. Fiorillo F. Musella E. Irani E.T. Triglia A.A. Kolodziejczyk A. Abentung G. Apostolova E.J. Paul V. Franke R. Kempfer A. Akalin S.A. Teichmann G. Dechant M.A. Ungless M. Nicodemi L. Welch G. Castelo-Branco A. Pombo
June, 2023 / NAR Genom Bioinform Cardiovascular disease biomarkers derived from circulating cell-free DNA methylation R.R.C. Cuadrat A. Kratzer H.G. Arnal A.C. Rathgeber K. Wreczycka A. Blume I.B. Gündüz V. Ebenal T. Mauno B. Osberg M. Moobed J. Hartung K. Jakobs C. Seppelt D. Meteva A. Haghikia D.M. Leistner Ulf Landmesser A. Akalin
December 06, 2021 / Genome Biol The SEQC2 epigenomics quality control (EpiQC) study J. Foox J. Nordlund C. Lalancette T. Gong M. Lacey S. Lent B.W. Langhorst V.K.C. Ponnaluri L. Williams K.R. Padmanabhan R. Cavalcante A. Lundmark D. Butler C. Mozsary J. Gurvitch J.M. Greally M. Suzuki M. Menor M. Nasu A. Alonso C. Sheridan A. Scherer S. Bruinsma G. Golda A. Muszynska P.P. Łabaj M.A. Campbell F. Wos A. Raine U. Liljedahl T. Axelsson C. Wang Z. Chen Z. Yang J. Li X. Yang H. Wang A. Melnick S. Guo A. Blume V. Franke I. Ibanez de Caceres C. Rodriguez-Antolin R. Rosas J.W. Davis J. Ishii D.B. Megherbi W. Xiao W. Liao J. Xu H. Hong B. Ning W. Tong A. Akalin Y. Wang Y. Deng C.E. Mason
June 24, 2021 / Sci Rep Predicting lethal courses in critically ill COVID-19 patients using a machine learning model trained on patients with non-COVID-19 viral pneumonia G. Lichtner F. Balzer S. Haufe N. Giesa F. Schiefenhövel M. Schmieding C. Jurth W. Kopp A. Akalin S.J. Schaller S. Weber-Carstens C. Spies F. von Dincklage