Scientific Publications Search Search Author Impact Factor Release Date Research Group Search Sort by RelevanceFrom A-ZAuthored onDate/Time RangeRelease date Order AscDesc Akalin, Altuna Dr. (75) Altmueller, Janine Dr.med. (1) Annibale, Paolo Dr. (1) Bahry, Ella Dr. (1) Barke, Niclas (1) Berruezo Llacuna, Maria (1) Birchmeier-Kohler, Carmen Prof. Dr. (3) Blume, Alexander Dr. (6) Borodina, Tatiana Dr. (1) Carvalho, Silvia Filipa (1) Cerda Jara, Cledi Alicia (1) Chekulaeva, Marina Dr. (2) Chen, Wei Prof. Dr. (1) Chu, Van Trung Dr. (1) Costanza, Mariantonia Dr. (2) Daumke, Oliver Prof. Dr. (4) Del Giudice, Simone (1) Deter, Aylina (1) Diecke, Sebastian Dr. (2) Di Virgilio, Michela Prof. Dr. (2) Driesner, Madlen (1) Emmenegger, Lisa (1) Escobar Fernandez, Helena Dr. (1) Faxel, Miriam (1) Franke, Vedran Dr. (23) Freimuth, Jonas (1) Gerhardt, Holger Prof. Dr. (1) Ghanbari, Mahsa Dr. (1) Gil, Marine (1) Graf, Robin Dr. (1) Harabula, Izabela-Cezara (1) Haucke, Volker Professor (1) Herzog, Margareta (1) Hinz, Michael Dr. (2) Hirsekorn, Antje (4) Höpken, Uta Elisabeth PD Dr. (2) Hübner, Norbert Prof. Dr. (1) Irastorza Azcarate, Ibai Dr. (1) Janz, Martin Dr. (3) Junker, Jan Philipp Prof. Dr. (1) Keller, Lisa (1) Kempa, Stefan Dr. (2) Kirchner, Marieluise Dr. (1) Kocks, Christine Dr. (2) Kolesnichenko, Marina Dr. (3) Kühn, Ralf Dr. (1) Kukalev, Alexander Dr. (2) Lacadie, Scott Allen Dr. (3) Landthaler, Markus Prof. Dr. (6) Lohse, Martin Prof. Dr. (1) Lusatis, Simone (1) Marg, Andreas Dr. (1) Mastrobuoni, Guido Dr. (1) Mathas, Stephan Dr. (3) Meijer, Mandy Dr. (1) Merks, Anne Margarete Dr. (1) Mertins, Philipp Dr. (1) Monti, Remo (1) Müller, Thomas Dr. (1) Müthel, Stefanie (3) Ofenbauer, Andreas Dr. (1) Ohler, Uwe Prof. Dr. (10) Oliveras Martinez, Anna Dr. (1) Panakova, Daniela Dr. (1) Patarcic, Inga Dr. (1) Patone, Giannino Dr. (1) Pombo, Ana Prof. Dr. (3) Popp, Oliver Dr. (1) Preibisch, Stephan Dr. (1) Prigione, Alessandro Prof. Dr. (1) Quedenau, Claudia (1) Rajewsky, Klaus Prof. Dr. (2) Rajewsky, Nikolaus Prof. Dr. (9) Rathgeber, Anja (1) Rehm, Armin Dr. (1) Roske, Yvette Dr. (1) Rudolph, Ina-Maria Dr. (1) Rybak-Wolf, Agnieszka Dr. (1) Scheidereit, Claus Prof. Dr. (4) Schmidt-Ullrich, Ruth Dr. (1) Schmitt, Clemens Prof. Dr. (1) Serebreni, Leonid Dr. (1) Siffrin, Volker (1) Spuler, Simone Prof. (2) Szabo, Dominik (1) Thieme, Christoph Dr. (1) Tursun, Baris Dr. (4) Uyar, Bora Dr. (15) Vucicevic, Dubravka (2) Willimsky, Gerald Dr. (1) Willnow, Thomas Prof. Dr. (1) Winick-Ng, Warren Dr. (1) Woehler, Andrew Dr. (4) Wyler, Emanuel Dr. (5) Zampieri, Niccolo Dr. (1) Zauber, Henrik Dr. (1) Zea Redondo, Luna (1) Zinzen, Robert Patrick Dr. (1) (-) Selbach, Matthias Prof. Dr. (5) (-) Wurmus, Ricardo (10) 2015 (2) 2017 (2) 2018 (2) 2019 (5) 2021 (1) 2022 (2) 2024 (1) Advanced Light Microscopy (1) AG Müller/Dechend (ECRC) (28) Anchored Signalling (3) Animal Phenotyping (12) Biobank (25) (-) Bioinformatics and Omics Data Science (15) Bioinformatics of RNA Structure and Transcriptome Regulation (1) Biology of Malignant Lymphomas (1) Cardiac MRI (3) Cell Biology of Immunity (1) Chemical Biology (2) Clinical Research Unit (1) Computational Regulatory Genomics (14) Developmental Biology / Signal Transduction (8) Epigenetic Regulation and Chromatin Architecture (1) Genetics and Genomics of Cardiovascular Diseases (16) Genetics of Congenital Heart Disease (61) Genome Diversification & Integrity (2) Genome Engineering & Disease Models (5) Genomics (1) Hypertension-caused End-Organ Damage (28) Hypertension-Mediated End-Organ Damage (28) Immune Mechanisms and Human Antibodies (8) Immune Regulation and Cancer (5) Integrative Vascular Biology (1) Intracellular Proteolysis (2) Mathematical Cell Physiology (1) Mathematical Modelling of Cellular Processes (3) Microenvironmental Regulation in Autoimmunity and Cancer (2) Mobile DNA (5) Molecular Biology of Peptide Hormones (8) Molecular Cardiovascular Research (1) Molecular Epidemiology (25) Molecular Genetics of Chronic Inflammation and Allergic Disease (4) Molecular Pathways in Cortical Development (1) Molecular Physiology of Somatic Sensation (4) Myology (2) Non-coding RNAs and Mechanisms of Cytoplasmic Gene Regulation (3) Organoids (2) Out-patient Clinic for Neuroimmunology (1) Pancreatic Organoid Research and Disease Modeling (1) Pluripotent Stem Cells (2) Proteome Dynamics (133) Proteomics (8) Proteomics and Metabolomics (6) Proteomics and Molecular Mechanisms of Neurodegenerative Diseases (2) RNA Biology and Posttranscriptional Regulation (19) Screening Unit (2) Structural Biology of Membrane-Associated Processes (8) Systems Biology Imaging (3) Systems Biology of Gene Regulatory Elements (14) Transgenics (5) Translational Bioinformatics (8) Translational Cardiology and Functional Genomics (3) Translational Oncology of Solid Tumors (1) 15 Results: Active Filter: Selbach, Matthias Prof. Dr.Wurmus, RicardoBioinformatics and Omics Data Science Sort: Result score Newest to oldest Oldest to newest April 11, 2024 / Nat Commun Pathogenic mutations of human phosphorylation sites affect protein–protein interactions T. Rrustemi K. Meyer Y. Roske B. Uyar A. Akalin K. Imami Y. Ishihama O. Daumke M. Selbach February 09, 2022 / bioRxiv Spatio-temporal, optogenetic control of gene expression in organoids I. Legnini L. Emmenegger A. Zappulo R. Wurmus A. Oliveras Martinez C. Cerda Jara A. Boltengagen T. Hessler G. Mastrobuoni A. Rybak-Wolf S. Kempa R.P. Zinzen A. Woehler N. Rajewsky 2019 / Methods Mol Biol Scalable workflows and reproducible data analysis for genomics F. Strozzi R. Janssen R. Wurmus M.R. Crusoe G. Githinji P. Di Tommaso D. Belhachemi S. Möller G. Smant J. de Ligt P. Prins December 01, 2018 / GigaScience PiGx: reproducible genomics analysis pipelines with GNU Guix R. Wurmus B. Uyar B. Osberg V. Franke A. Gosdschan K. Wreczycka J. Ronen A. Akalin March 28, 2019 / Blood Autocrine LTA signaling drives NF-κB and JAK-STAT activity and myeloid gene expression in Hodgkin lymphoma L. von Hoff E. Kärgel V. Franke E. McShane K.W. Schulz-Beiss G. Patone N. Schleussner M. Kolesnichenko N. Hübner O. Daumke M. Selbach A. Akalin S. Mathas C. Scheidereit February 21, 2019 / Genome Biol Reproducible inference of transcription factor footprints in ATAC-seq and DNase-seq datasets using protocol-specific bias modeling A. Karabacak Calviello A. Hirsekorn R. Wurmus D. Yusuf U. Ohler April 09, 2019 / Nat Commun Global identification of functional microRNA-mRNA interactions in Drosophila H.H. Wessels S. Lebedeva A. Hirsekorn R. Wurmus A. Akalin N. Mukherjee U. Ohler June 20, 2019 / Nucleic Acids Res HOT or not: examining the basis of high-occupancy target regions K. Wreczycka V. Franke B. Uyar R. Wurmus S. Bulut B. Tursun A. Akalin September 20, 2018 / Cell Mutations in disordered regions can cause disease by creating dileucine motifs K. Meyer M. Kirchner B. Uyar J.Y. Cheng G. Russo L.R. Hernandez-Miranda A. Szymborska H. Zauber I.M. Rudolph T.E. Willnow A. Akalin V. Haucke H. Gerhardt C. Birchmeier R. Kühn M. Krauss S. Diecke J.M. Pascual M. Selbach January 28, 2015 / Nucleic Acids Res DoRiNA 2.0-upgrading the doRiNA database of RNA interactions in post-transcriptional regulation K. Blin C. Dieterich R. Wurmus N. Rajewsky M. Landthaler A. Akalin Pagination Current page 1 Page 2 Next page Next › Last page Last »
April 11, 2024 / Nat Commun Pathogenic mutations of human phosphorylation sites affect protein–protein interactions T. Rrustemi K. Meyer Y. Roske B. Uyar A. Akalin K. Imami Y. Ishihama O. Daumke M. Selbach
February 09, 2022 / bioRxiv Spatio-temporal, optogenetic control of gene expression in organoids I. Legnini L. Emmenegger A. Zappulo R. Wurmus A. Oliveras Martinez C. Cerda Jara A. Boltengagen T. Hessler G. Mastrobuoni A. Rybak-Wolf S. Kempa R.P. Zinzen A. Woehler N. Rajewsky
2019 / Methods Mol Biol Scalable workflows and reproducible data analysis for genomics F. Strozzi R. Janssen R. Wurmus M.R. Crusoe G. Githinji P. Di Tommaso D. Belhachemi S. Möller G. Smant J. de Ligt P. Prins
December 01, 2018 / GigaScience PiGx: reproducible genomics analysis pipelines with GNU Guix R. Wurmus B. Uyar B. Osberg V. Franke A. Gosdschan K. Wreczycka J. Ronen A. Akalin
March 28, 2019 / Blood Autocrine LTA signaling drives NF-κB and JAK-STAT activity and myeloid gene expression in Hodgkin lymphoma L. von Hoff E. Kärgel V. Franke E. McShane K.W. Schulz-Beiss G. Patone N. Schleussner M. Kolesnichenko N. Hübner O. Daumke M. Selbach A. Akalin S. Mathas C. Scheidereit
February 21, 2019 / Genome Biol Reproducible inference of transcription factor footprints in ATAC-seq and DNase-seq datasets using protocol-specific bias modeling A. Karabacak Calviello A. Hirsekorn R. Wurmus D. Yusuf U. Ohler
April 09, 2019 / Nat Commun Global identification of functional microRNA-mRNA interactions in Drosophila H.H. Wessels S. Lebedeva A. Hirsekorn R. Wurmus A. Akalin N. Mukherjee U. Ohler
June 20, 2019 / Nucleic Acids Res HOT or not: examining the basis of high-occupancy target regions K. Wreczycka V. Franke B. Uyar R. Wurmus S. Bulut B. Tursun A. Akalin
September 20, 2018 / Cell Mutations in disordered regions can cause disease by creating dileucine motifs K. Meyer M. Kirchner B. Uyar J.Y. Cheng G. Russo L.R. Hernandez-Miranda A. Szymborska H. Zauber I.M. Rudolph T.E. Willnow A. Akalin V. Haucke H. Gerhardt C. Birchmeier R. Kühn M. Krauss S. Diecke J.M. Pascual M. Selbach
January 28, 2015 / Nucleic Acids Res DoRiNA 2.0-upgrading the doRiNA database of RNA interactions in post-transcriptional regulation K. Blin C. Dieterich R. Wurmus N. Rajewsky M. Landthaler A. Akalin