Scientific Publications Search Search Author Impact Factor Release Date Research Group Search Sort by RelevanceFrom A-ZAuthored onDate/Time RangeRelease date Order AscDesc Altmueller, Janine Dr.med. (1) Annibale, Paolo Dr. (1) Bahry, Ella Dr. (1) Barke, Niclas (1) Berruezo Llacuna, Maria (1) Birchmeier-Kohler, Carmen Prof. Dr. (3) Blume, Alexander Dr. (6) Borodina, Tatiana Dr. (1) Carvalho, Silvia Filipa (1) Cerda Jara, Cledi Alicia (1) Chekulaeva, Marina Dr. (2) Chen, Wei Prof. Dr. (1) Chu, Van Trung Dr. (1) Costanza, Mariantonia Dr. (2) Daumke, Oliver Prof. Dr. (4) Del Giudice, Simone (1) Deter, Aylina (1) Diecke, Sebastian Dr. (2) Di Virgilio, Michela Prof. Dr. (2) Driesner, Madlen (1) Emmenegger, Lisa (1) Escobar Fernandez, Helena Dr. (1) Faxel, Miriam (1) Franke, Vedran Dr. (23) Freimuth, Jonas (1) Gerhardt, Holger Prof. Dr. (1) Ghanbari, Mahsa Dr. (1) Gil, Marine (1) Graf, Robin Dr. (1) Harabula, Izabela-Cezara (1) Haucke, Volker Professor (1) Herzog, Margareta (1) Hinz, Michael Dr. (2) Hirsekorn, Antje (4) Höpken, Uta Elisabeth PD Dr. (2) Hübner, Norbert Prof. Dr. (1) Irastorza Azcarate, Ibai Dr. (1) Janz, Martin Dr. (3) Junker, Jan Philipp Prof. Dr. (1) Keller, Lisa (1) Kempa, Stefan Dr. (2) Kirchner, Marieluise Dr. (1) Kocks, Christine Dr. (2) Kolesnichenko, Marina Dr. (3) Kühn, Ralf Dr. (1) Kukalev, Alexander Dr. (2) Lacadie, Scott Allen Dr. (3) Landthaler, Markus Prof. Dr. (6) Lohse, Martin Prof. Dr. (1) Lusatis, Simone (1) Marg, Andreas Dr. (1) Mastrobuoni, Guido Dr. (1) Mathas, Stephan Dr. (3) Meijer, Mandy Dr. (1) Merks, Anne Margarete Dr. (1) Mertins, Philipp Dr. (1) Monti, Remo (1) Müller, Thomas Dr. (1) Müthel, Stefanie (3) Ofenbauer, Andreas Dr. (1) Ohler, Uwe Prof. Dr. (10) Oliveras Martinez, Anna Dr. (1) Panakova, Daniela Dr. (1) Patarcic, Inga Dr. (1) Patone, Giannino Dr. (1) Pombo, Ana Prof. Dr. (3) Popp, Oliver Dr. (1) Preibisch, Stephan Dr. (1) Prigione, Alessandro Prof. Dr. (1) Quedenau, Claudia (1) Rajewsky, Klaus Prof. Dr. (2) Rajewsky, Nikolaus Prof. Dr. (9) Rathgeber, Anja (1) Rehm, Armin Dr. (1) Roske, Yvette Dr. (1) Rudolph, Ina-Maria Dr. (1) Rybak-Wolf, Agnieszka Dr. (1) Scheidereit, Claus Prof. Dr. (4) Schmidt-Ullrich, Ruth Dr. (1) Schmitt, Clemens Prof. Dr. (1) Selbach, Matthias Prof. Dr. (5) Serebreni, Leonid Dr. (1) Siffrin, Volker (1) Spuler, Simone Prof. (2) Szabo, Dominik (1) Thieme, Christoph Dr. (1) Tursun, Baris Dr. (4) Uyar, Bora Dr. (15) Vucicevic, Dubravka (2) Willimsky, Gerald Dr. (1) Willnow, Thomas Prof. Dr. (1) Winick-Ng, Warren Dr. (1) Woehler, Andrew Dr. (4) Wurmus, Ricardo (10) Zampieri, Niccolo Dr. (1) Zauber, Henrik Dr. (1) Zea Redondo, Luna (1) Zinzen, Robert Patrick Dr. (1) (-) Akalin, Altuna Dr. (75) (-) Wyler, Emanuel Dr. (5) 2006 (2) 2007 (1) 2008 (1) 2009 (3) 2010 (3) 2011 (1) 2012 (4) 2013 (3) 2014 (3) 2015 (3) 2017 (6) 2018 (6) 2019 (9) 2020 (7) 2021 (9) 2022 (6) 2023 (6) 2024 (2) (-) Bioinformatics and Omics Data Science (75) Biology of Malignant Lymphomas (4) Biomedical Image Analysis (7) Cancer Genetics and Cellular Stress Responses (2) Computational methodologies and omic analytics (1) Computational Regulatory Genomics (12) Developmental Biology / Signal Transduction (4) Development and Function of Neural Circuits (1) Electron Microscopy (1) Epigenetic Regulation and Chromatin Architecture (4) Genetics and Genomics of Cardiovascular Diseases (4) Genome Diversification & Integrity (2) Genome Engineering & Disease Models (1) Genomics (4) Host-microbiome factors in cardiovascular disease (2) Immune Regulation and Cancer (3) Integrative Vascular Biology (1) Mathematical Modelling of Cellular Processes (1) Microenvironmental Regulation in Autoimmunity and Cancer (2) Molecular Cardiovascular Research (1) Myology (2) Neuroimmunology Laboratory (1) Non-coding RNAs and Mechanisms of Cytoplasmic Gene Regulation (5) Organoids (2) Out-patient Clinic for Neuroimmunology (1) Pluripotent Stem Cells (3) Protein Production and Characterization (1) Proteome Dynamics (15) Proteomics (3) Proteomics and Metabolomics (4) Proteomics and Molecular Mechanisms of Neurodegenerative Diseases (2) Quantitative Developmental Biology (1) RNA Biology and Posttranscriptional Regulation (68) Structural Biology of Membrane-Associated Processes (4) Systems Biology Imaging (4) Systems Biology of Gene Regulatory Elements (14) Transgenics (1) Translational Bioinformatics (12) Translational Tumorimmunology (1) 75 Results: Active Filter: Akalin, Altuna Dr.Wyler, Emanuel Dr.Bioinformatics and Omics Data Science Sort: Result score Newest to oldest Oldest to newest August 06, 2024 / BMC Bioinformatics scMaui: a widely applicable deep learning framework for single-cell multiomics integration in the presence of batch effects and missing data Y. Jeong J. Ronen W. Kopp P. Lutsik A. Akalin April 11, 2024 / Nat Commun Pathogenic mutations of human phosphorylation sites affect protein–protein interactions T. Rrustemi K. Meyer Y. Roske B. Uyar A. Akalin K. Imami Y. Ishihama O. Daumke M. Selbach April 09, 2015 / Nature Genomic profiling of DNA methyltransferases reveals a role for DNMT3B in genic methylation T. Baubec D.F. Colombo C. Wirbelauer J. Schmidt L. Burger A.R. Krebs A. Akalin D. Schübeler December, 2019 / Aging Cell The conserved histone chaperone LIN-53 is required for normal lifespan and maintenance of muscle integrity in Caenorhabditis elegans. S. Müthel B. Uyar M. He A. Krause B. Vitrinel S. Bulut D. Vasiljevic I. Marchal S. Kempa A. Akalin B. Tursun October 25, 2019 / Nat Commun Single-cell RNA-sequencing of herpes simplex virus 1-infected cells connects NRF2 activation to an antiviral program E. Wyler V. Franke J. Menegatti C. Kocks A. Boltengagen S. Praktiknjo B. Walch-Rückheim J. Bosse N. Rajewsky F. Grässer A. Akalin M. Landthaler December 01, 2018 / GigaScience PiGx: reproducible genomics analysis pipelines with GNU Guix R. Wurmus B. Uyar B. Osberg V. Franke A. Gosdschan K. Wreczycka J. Ronen A. Akalin December 14, 2018 / EMBO J The IκB kinase complex is a regulator of mRNA stability N. Mikuda M. Kolesnichenko P. Beaudette O. Popp B. Uyar W. Sun A.B. Tufan B. Perder A. Akalin W. Chen P. Mertins G. Dittmar M. Hinz C. Scheidereit January 25, 2019 / Nucleic Acids Res Deciphering human ribonucleoprotein regulatory networks N. Mukherjee H.H. Wessels S. Lebedeva M. Sajek M. Ghanbari A. Garzia A. Munteanu D. Yusuf T. Farazi J.I. Hoell K.M. Akat A. Akalin T. Tuschl U. Ohler March 18, 2019 / Nucleic Acids Res Alternative 3' UTRs direct localization of functionally diverse protein isoforms in neuronal compartments C. Ciolli Mattioli A. Rom V. Franke K. Imami G. Arrey M. Terne A. Woehler A. Akalin I. Ulitsky M. Chekulaeva December, 2019 / Life Sci Allianc Evaluation of colorectal cancer subtypes and cell lines using deep learning J. Ronen S. Hayat A. Akalin Pagination Current page 1 Page 2 Page 3 Page 4 … Next page Next › Last page Last »
August 06, 2024 / BMC Bioinformatics scMaui: a widely applicable deep learning framework for single-cell multiomics integration in the presence of batch effects and missing data Y. Jeong J. Ronen W. Kopp P. Lutsik A. Akalin
April 11, 2024 / Nat Commun Pathogenic mutations of human phosphorylation sites affect protein–protein interactions T. Rrustemi K. Meyer Y. Roske B. Uyar A. Akalin K. Imami Y. Ishihama O. Daumke M. Selbach
April 09, 2015 / Nature Genomic profiling of DNA methyltransferases reveals a role for DNMT3B in genic methylation T. Baubec D.F. Colombo C. Wirbelauer J. Schmidt L. Burger A.R. Krebs A. Akalin D. Schübeler
December, 2019 / Aging Cell The conserved histone chaperone LIN-53 is required for normal lifespan and maintenance of muscle integrity in Caenorhabditis elegans. S. Müthel B. Uyar M. He A. Krause B. Vitrinel S. Bulut D. Vasiljevic I. Marchal S. Kempa A. Akalin B. Tursun
October 25, 2019 / Nat Commun Single-cell RNA-sequencing of herpes simplex virus 1-infected cells connects NRF2 activation to an antiviral program E. Wyler V. Franke J. Menegatti C. Kocks A. Boltengagen S. Praktiknjo B. Walch-Rückheim J. Bosse N. Rajewsky F. Grässer A. Akalin M. Landthaler
December 01, 2018 / GigaScience PiGx: reproducible genomics analysis pipelines with GNU Guix R. Wurmus B. Uyar B. Osberg V. Franke A. Gosdschan K. Wreczycka J. Ronen A. Akalin
December 14, 2018 / EMBO J The IκB kinase complex is a regulator of mRNA stability N. Mikuda M. Kolesnichenko P. Beaudette O. Popp B. Uyar W. Sun A.B. Tufan B. Perder A. Akalin W. Chen P. Mertins G. Dittmar M. Hinz C. Scheidereit
January 25, 2019 / Nucleic Acids Res Deciphering human ribonucleoprotein regulatory networks N. Mukherjee H.H. Wessels S. Lebedeva M. Sajek M. Ghanbari A. Garzia A. Munteanu D. Yusuf T. Farazi J.I. Hoell K.M. Akat A. Akalin T. Tuschl U. Ohler
March 18, 2019 / Nucleic Acids Res Alternative 3' UTRs direct localization of functionally diverse protein isoforms in neuronal compartments C. Ciolli Mattioli A. Rom V. Franke K. Imami G. Arrey M. Terne A. Woehler A. Akalin I. Ulitsky M. Chekulaeva
December, 2019 / Life Sci Allianc Evaluation of colorectal cancer subtypes and cell lines using deep learning J. Ronen S. Hayat A. Akalin