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Scientific Publications

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/ BMC Bioinformatics

scMaui: a widely applicable deep learning framework for single-cell multiomics integration in the presence of batch effects and missing data

  • Y. Jeong
  • J. Ronen
  • W. Kopp
  • P. Lutsik
  • A. Akalin
/ Front Immunol

Cytosolic nucleic acid sensors and interferon beta-1 activation drive radiation-induced anti-tumour immune effects in human pancreatic cancer cells

  • S. Kerschbaum-Gruber
  • A. Kleinwächter
  • K. Popova
  • A. Kneringer
  • L.M. Appel
  • K. Stasny
  • A. Röhrer
  • A.B. Dias
  • J. Benedum
  • L. Walch
  • A. Postl
  • S. Barna
  • B. Kratzer
  • W.F. Pickl
  • A. Akalin
  • F. Horvat
  • V. Franke
  • J. Widder
  • D. Georg
  • D. Slade
/ bioRxiv

Herpesviral induction of germline transcription factor DUX4 is critical for viral gene expression

  • S. Walter
  • V. Franke
  • N. Drayman
  • E. Wyler
  • S. Tay
  • M. Landthaler
  • A. Akalin
  • A. Ensser
  • F. Full
/ bioRxiv

HMGXB4 targets Sleeping Beauty transposition to vertebrate germinal stem sells

  • A. Devaraj
  • M. Singh
  • S. Narayanavari
  • G. Yong
  • J. Wang
  • J. Wang
  • M. Becker
  • O. Walisko
  • A. Schorn
  • Z. Cseresznyés
  • D. Grzela
  • T. Raskó
  • M. Selbach
  • Z. Ivics
  • Z. Izsvák
/ bioRxiv

Mutant screen reveals the Piccolo's control over depression and brain-gonad crosstalk

  • G.A. Medrano
  • M. Singh
  • E.J. Plautz
  • L.B. Good
  • K.M. Chapman
  • J. Chaudhary
  • P. Jaichander
  • H.M. Powell
  • A. Pudasaini
  • J.M. Shelton
  • J.A. Richardson
  • X.J. Xie
  • Z. Ivics
  • C. Braun
  • F. Ackermann
  • C.C. Garner
  • Z. Izsvak
  • F.K. Hamra
/ bioRxiv

The phylogenetically distinct early human embryo

  • M. Singh
  • T.J. Widmann
  • J.L. Cortes
  • G.G. Schumann
  • S. Wunderlich
  • U. Martin
  • J.L. Garcia-Perez
  • L.D. Hurst
  • Z. Izsvak
/ Nat Commun

Pathogenic mutations of human phosphorylation sites affect protein–protein interactions

  • T. Rrustemi
  • K. Meyer
  • Y. Roske
  • B. Uyar
  • A. Akalin
  • K. Imami
  • Y. Ishihama
  • O. Daumke
  • M. Selbach
/ Basic Res Cardiol

The intron 6 G/T polymorphism of c-myb oncogene and the risk for coronary in-stent restenosis

  • C.M. Gross
  • J. Kraemer
  • A. Pfeufer
  • R. Dietz
  • R. Gessner
  • M. Praus
/ FASEB J

Reoxygenation after severe hypoxia induces cardiomyocyte hypertrophy in vitro: activation of CREB downstream of GSK3beta

  • A. El Jamali
  • C. Freund
  • C. Rechner
  • C. Scheidereit
  • R. Dietz
  • M.W. Bergmann
/ J Mol Cell Cardiol

Statins inhibit reoxygenation-induced cardiomyocyte apoptosis: role for glycogen synthase kinase 3beta and transcription factor beta-catenin

  • M.W. Bergmann
  • C. Rechner
  • C. Freund
  • A. Baurand
  • A. El Jamali
  • R. Dietz