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Januar 2022 / Cell Genom Single-cell-resolved dynamics of chromatin architecture delineate cell and regulatory states in zebrafish embryos A.C. McGarvey W. Kopp D. Vučićević K. Mattonet R. Kempfer A. Hirsekorn I. Bilić M. Gil A. Trinks A.M. Merks D. Panáková A. Pombo A. Akalin J.P. Junker D.Y.R. Stainier D. Garfield U. Ohler S.A. Lacadie 04. August 2021 / Circ Genom Precis Med Pathogenic variants associated with dilated cardiomyopathy predict outcome in pediatric myocarditis F. Seidel M. Holtgrewe N. Al-Wakeel-Marquard B. Opgen-Rhein J. Dartsch C. Herbst D. Beule T. Pickardt K. Klingel D. Messroghli F. Berger S. Schubert J. Kühnisch S. Klaassen Juli 2023 / Nat Methods Multiplex-GAM: genome-wide identification of chromatin contacts yields insights overlooked by Hi-C R.A. Beagrie C.J. Thieme C. Annunziatella C. Baugher Y. Zhang M. Schueler A. Kukalev R. Kempfer A.M. Chiariello S. Bianco Y. Li T. Davis A. Scialdone L.R. Welch M. Nicodemi A. Pombo Oktober 2023 / Nat Methods Spatiotemporal, optogenetic control of gene expression in organoids I. Legnini L. Emmenegger A. Zappulo A. Rybak-Wolf R. Wurmus A. Oliveras Martinez C. Cerda Jara A. Boltengagen T. Hessler G. Mastrobuoni S. Kempa R. Zinzen A. Woehler N. Rajewsky September 2021 / Front Pediatr Reduced systolic function and not genetic variants determine outcome in pediatric and adult left ventricular noncompaction cardiomyopathy A. Schultze-Berndt J. Kühnisch C. Herbst F. Seidel N. Al-Wakeel-Marquard J. Dartsch S. Theisen W. Knirsch R. Jenni M. Greutmann E. Oechslin F. Berger S. Klaassen 25. November 2021 / Nature Cell-type specialization is encoded by specific chromatin topologies W. Winick-Ng A. Kukalev I. Harabula L. Zea-Redondo D. Szabó M. Meijer L. Serebreni Y. Zhang S. Bianco A.M. Chiariello I. Irastorza-Azcarate C.J. Thieme T.M. Sparks S. Carvalho L. Fiorillo F. Musella E. Irani E.T. Triglia A.A. Kolodziejczyk A. Abentung G. Apostolova E.J. Paul V. Franke R. 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13. Januar 2022 / Cell Genom Single-cell-resolved dynamics of chromatin architecture delineate cell and regulatory states in zebrafish embryos A.C. McGarvey W. Kopp D. Vučićević K. Mattonet R. Kempfer A. Hirsekorn I. Bilić M. Gil A. Trinks A.M. Merks D. Panáková A. Pombo A. Akalin J.P. Junker D.Y.R. Stainier D. Garfield U. Ohler S.A. Lacadie
04. August 2021 / Circ Genom Precis Med Pathogenic variants associated with dilated cardiomyopathy predict outcome in pediatric myocarditis F. Seidel M. Holtgrewe N. Al-Wakeel-Marquard B. Opgen-Rhein J. Dartsch C. Herbst D. Beule T. Pickardt K. Klingel D. Messroghli F. Berger S. Schubert J. Kühnisch S. Klaassen
Juli 2023 / Nat Methods Multiplex-GAM: genome-wide identification of chromatin contacts yields insights overlooked by Hi-C R.A. Beagrie C.J. Thieme C. Annunziatella C. Baugher Y. Zhang M. Schueler A. Kukalev R. Kempfer A.M. Chiariello S. Bianco Y. Li T. Davis A. Scialdone L.R. Welch M. Nicodemi A. Pombo
Oktober 2023 / Nat Methods Spatiotemporal, optogenetic control of gene expression in organoids I. Legnini L. Emmenegger A. Zappulo A. Rybak-Wolf R. Wurmus A. Oliveras Martinez C. Cerda Jara A. Boltengagen T. Hessler G. Mastrobuoni S. Kempa R. Zinzen A. Woehler N. Rajewsky
September 2021 / Front Pediatr Reduced systolic function and not genetic variants determine outcome in pediatric and adult left ventricular noncompaction cardiomyopathy A. Schultze-Berndt J. Kühnisch C. Herbst F. Seidel N. Al-Wakeel-Marquard J. Dartsch S. Theisen W. Knirsch R. Jenni M. Greutmann E. Oechslin F. Berger S. Klaassen
25. November 2021 / Nature Cell-type specialization is encoded by specific chromatin topologies W. Winick-Ng A. Kukalev I. Harabula L. Zea-Redondo D. Szabó M. Meijer L. Serebreni Y. Zhang S. Bianco A.M. Chiariello I. Irastorza-Azcarate C.J. Thieme T.M. Sparks S. Carvalho L. Fiorillo F. Musella E. Irani E.T. Triglia A.A. Kolodziejczyk A. Abentung G. Apostolova E.J. Paul V. Franke R. Kempfer A. Akalin S.A. Teichmann G. Dechant M.A. Ungless M. Nicodemi L. Welch G. Castelo-Branco A. Pombo