February 23, 2026 / 2025 IEEE/CVF International Conference on Computer Vision Workshops (ICCVW) SelfAdapt: unsupervised domain adaptation of cell segmentation models Fabian H. Reith Jannik Franzen J. Lorenz Rumberger Dagmar Kainmueller
2024 / Proceedings of Machine Learning Research Heterogeneous medical data integration with Multi-Source StyleGAN W.C. Lai M. Kirchler H. Yassin J. Fehr A. Rakowski H. Olsson L. Starke J.M. Millward S. Waiczies C. Lippert
2024 / Proceedings of Machine Learning Research HoVer-NeXt: a fast nuclei segmentation and classification pipeline for next generation histopathology E. Baumann B. Dislich J.L. Rumberger I.D. Nagtegaal M.R. Martínez I. Zlobec
2020 / Proceedings of Machine Learning Research An auxiliary task for learning nuclei segmentation in 3D microscopy images Peter Hirsch Dagmar Kainmueller
2022 / Proceedings of Machine Learning Research Multimodal single cell data integration challenge: results and lessons learned C. Lance M.D. Luecken D.B. Burkhardt R. Cannoodt P. Rautenstrauch A.C. Laddach A. Ubingazhibov Z.J. Cao K. Deng S. Khan Q. Liu N. Russkikh G. Ryazantsev U. Ohler A.O. Pisco J.M. Bloom S. Krishnaswamy F.J. Theis
April 11, 2025 / Proceedings of the AAAI Conference on Artificial Intelligence Neurons to words: a novel method for automated neural network interpretability and alignment L.S. Puglisi F. Valdés J.J. Metzger
February, 2025 / Advances in Neural Information Processing Systems Arctique: an artificial histopathological dataset unifying realism and controllability for uncertainty quantification J. Franzen C. Winklmayr V.E. Guarino C. Karg X. Yu N. Koreuber J.P. Albrecht P. Bischoff D. Kainmueller
2004 / Novartis Foundation Symposium The influence of CD25+ cells on the generation of immunity to tumour cell lines in mice E. Jones D. Golgher A.K. Simon M. Dahm-Vicker G. Screaton T. Elliott A. Gallimore
September 16, 2024 / 2024 IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR) FISBe: a real-world benchmark dataset for instance segmentation of long-range thin filamentous structures L. Mais P. Hirsch Claire Managan Ramya Kandarpa J.L. Rumberger Annika Reinke Lena Maier-Hein Gudrun Ihrke D. Kainmueller