Spatial transcriptomics: focus on cells in their microenvironment

14:00 - 15:45

Thomas Conrad (MDC) - Introduction to spatial technologies @ MDC/BIH genomics TP

Christoph König (Nanostring)  - Deep-Plex Multianalyte Spatial Expression Profiling with Nanostring: From Whole Transcriptome to Single Cell Resolution

Tancredi Pentimalli (MDC) - 3D spatial architecture of Non-Small Cell Lung Cancer at single molecule resolution

15:45 - 16:00 coffee break                                             

16:00 - 17:30                

tbd - 10X Genomics          

Anna Pascual (DRFZ) - Combining ST and multiplexed histology as a tool for next-generation pathology

17:30 - 18:00 break + snacks                            

18:00 - 19:30                

10X Genomics user workshop (separate registration via 10x Genomics)

10X Genomics + Nanostring 1:1 meetings                 

Organizers: Janine Altmüller (MDC/BIH) and Anja Hauser (DRFZ/Charité)