The IBEX knowledge-base a community resource enabling adoption and development of immunofluorescence imaging methods
Autor/innen
- Ziv Yaniv
- Ifeanyichukwu U. Anidi
- Leanne Arakkal
- Armando J. Arroyo-Mejías
- Rebecca T. Beuschel
- Katy Börner
- Colin J. Chu
- Beatrice Clark
- Menna R. Clatworthy
- Jake Colautti
- Fabian Coscia
- Joshua Croteau
- Saven Denha
- Rose Dever
- Walderez O. Dutra
- Sonja Fritzsche
- Spencer Fullam
- Michael Y. Gerner
- Anita Gola
- Kenneth J. Gollob
- Jonathan M. Hernandez
- Jyh Liang Hor
- Hiroshi Ichise
- Zhixin Jing
- Danny Jonigk
- Evelyn Kandov
- Wolfgang Kastenmüller
- Joshua F.E. Koenig
- Aanandita Kothurkar
- Rosa K. Kortekaas
- Alexandra Y. Kreins
- Ian T. Lamborn
- Yuri Lin
- Katia Luciano Pereira Morais
- Aleksandra Lunich
- Jean C.S. Luz
- Ryan B. MacDonald
- Chen Makranz
- Vivien I. Maltez
- John E. McDonough
- Ryan V. Moriarty
- Juan M. Ocampo-Godinez
- Vitoria M. Olyntho
- Annette Oxenius
- Kartika Padhan
- Kirsten Remmert
- Nathan Richoz
- Edward C. Schrom
- Wanjing Shang
- Lihong Shi
- Rochelle M. Shih
- Emily Speranza
- Salome Stierli
- Sarah A. Teichmann
- Tibor Z. Veres
- Megan Vierhout
- Brianna T. Wachter
- Adam K. Wade-Vallance
- Margaret Williams
- Nathan Zangger
- Ronald N. Germain
- Andrea J. Radtke
Journal
- eLife
Quellenangabe
- eLife 14: RP105737
Zusammenfassung
The iterative bleaching extends multiplexity (IBEX) Knowledge- Base is a central portal for researchers adopting IBEX and related 2D and 3D immunofluorescence imaging methods. The design of the Knowledge- Base is modeled after efforts in the open- source software community and includes three facets: a development platform (GitHub), static website, and service for data archiving. The Knowledge- Base facilitates the practice of open science throughout the research life cycle by providing validation data for recommended and non- recommended reagents, such as primary and secondary antibodies. In addition to reporting negative data, the Knowledge- Base empowers method adoption and evolution by providing a venue for sharing protocols, videos, datasets, software, and publications. A dedicated discussion forum fosters a sense of community among researchers while addressing questions not covered in published manuscripts. Together, scientists from around the world are advancing scientific discovery at a faster pace, reducing wasted time and effort, and instilling greater confidence in the resulting data.